Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G57890	Arabidopsis thaliana	0.0	1256	610	100.00
AT2G42230	Arabidopsis thaliana	0.0	940	612	76.31
ATR_00022G02510	Amborella trichopoda	0.0	696	628	56.85
OS06G41110	Oryza sativa	0.0	690	604	57.95
OS02G10130	Oryza sativa	0.0	652	589	59.25
PP00243G00260	Physcomitrella patens	2e-180	532	644	44.88
PP00028G01980	Physcomitrella patens	2e-178	527	636	44.34
PP00079G00100	Physcomitrella patens	2e-141	431	638	40.28
PP00031G01400	Physcomitrella patens	1e-134	414	642	38.63
CV00G78870	Coccomyxa subellipsoidea C-169	8e-56	204	286	38.11
ORCC809_14G02670	Ostreococcus sp RCC809	8e-54	192	248	40.73
OM_14G00660	Ostreococcus mediterraneus	3e-49	186	237	36.71
RCC4223.05g03120	Picochlorum_RCC4223	4e-49	186	283	33.22
AC00G61560	Asterochloris sp. Cgr-DA1pho v2.0	1e-47	181	455	28.79
PI00G06420	Picochlorum sp. SENEW3 (SE3)	5e-47	179	283	33.57
MRCC299_11G05000	Micromonas sp RCC299	1e-46	178	363	32.23
OL14G03230	Ostreococcus lucimarinus	1e-45	174	243	37.45
CR09G06880	Chlamydomonas reinhardtii	4e-45	174	383	31.85
OT_15G02570	Ostreococcus tauri	6e-44	170	249	37.35
MP08G01130	Micromonas pusilla strain CCMP1545	1e-39	155	278	34.53
AP00G31590	Auxenochlorella protothecoides	2e-35	142	359	29.25
ES0184G00200	Ectocarpus siliculosus	8e-34	137	277	30.69
VC00G90710	Volvox carteri	7e-33	137	277	33.94
ENSMUSG00000004462	Mus musculus	3e-31	132	284	29.23
gsu22220	Galdieria sulphuraria	9e-27	118	213	33.33
Naga_100077g11	Nannochloropsis gaditana	2e-25	115	278	29.14
phs378910	Phytophtora sojae	6e-21	101	289	25.95
BPRRCC1105_02G00440	Bathycoccus prasinos	4e-20	98.6	265	23.77
TP04G00730	Thalassiosira pseudonana	2e-16	86.3	108	43.52
emh301370	Emiliania huxleyi	4e-16	85.9	136	33.82
FC012G01490	Fragilariopsis cylindrus	9e-16	85.1	101	39.60
PTI_22G00010	Phaeodactylum tricornutum	1e-15	84.7	192	30.21
PTI_28G01700	Phaeodactylum tricornutum	1e-15	84.7	192	30.21
ccr144360	Chondrus crispus	5e-14	79.3	313	24.28
DDB_G0281221	Dictyostelium discoideum	9e-14	77.8	132	31.06
pte412120	Paramecium tetraurelia	1e-12	74.7	263	22.43
pte705640	Paramecium tetraurelia	2e-11	70.9	263	22.43
OS02G35110	Oryza sativa	8e-08	58.5	133	27.82
CM08G00070	Cyanidioschyzon merolae	1e-07	58.9	257	19.46
ENSMUSG00000036430	Mus musculus	2e-07	57.4	145	26.21
pte77040	Paramecium tetraurelia	2e-07	57.4	188	25.00
PI00G23310	Picochlorum sp. SENEW3 (SE3)	9e-07	54.3	149	25.50
CR06G11780	Chlamydomonas reinhardtii	9e-07	55.8	149	26.85
RCC4223.04g05180	Picochlorum_RCC4223	1e-06	54.3	140	25.00
CR03G13110	Chlamydomonas reinhardtii	2e-06	54.7	122	22.95
AC00G88070	Asterochloris sp. Cgr-DA1pho v2.0	3e-06	52.0	126	23.02
MRCC299_08G02810	Micromonas sp RCC299	5e-06	53.1	169	23.67
ATR_00017G01980	Amborella trichopoda	5e-06	52.8	123	26.83
HE0000G18980	Helicosporidium sp.	6e-06	52.4	103	26.21
pte139160	Paramecium tetraurelia	7e-06	52.8	196	21.43
ES0213G00160	Ectocarpus siliculosus	1e-05	52.4	128	24.22

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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