Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G57460	Arabidopsis thaliana	0.0	741	357	100.00
AT3G57470	Arabidopsis thaliana	5e-67	232	216	59.72
OS07G38260	Oryza sativa	1e-60	214	371	35.85
AT2G41790	Arabidopsis thaliana	5e-56	201	216	51.39
OS07G38270	Oryza sativa	3e-54	196	371	36.12
ATR_00103G00490	Amborella trichopoda	5e-50	184	378	32.54
ATR_00103G00470	Amborella trichopoda	2e-38	149	144	50.69
OS01G57073	Oryza sativa	7e-38	149	229	36.24
OS07G38280	Oryza sativa	6e-36	144	202	43.56
OS01G57082	Oryza sativa	7e-34	136	292	31.51
PP00126G00640	Physcomitrella patens	9e-30	125	205	32.20
PP00051G00040	Physcomitrella patens	8e-28	119	148	37.16
PP00064G00410	Physcomitrella patens	3e-22	102	150	35.33
PP00194G00820	Physcomitrella patens	2e-20	96.7	144	33.33
ENSMUSG00000053510	Mus musculus	1e-16	85.1	145	31.72
ENSG00000078618	Homo sapiens	1e-16	85.1	145	32.41
ATR_00003G03040	Amborella trichopoda	3e-16	78.6	77	50.65
CR09G00020	Chlamydomonas reinhardtii	3e-16	84.0	99	43.43
VC00G124980	Volvox carteri	8e-16	82.8	99	42.42
ES0320G00110	Ectocarpus siliculosus	2e-15	81.6	197	25.89
CV00G92310	Coccomyxa subellipsoidea C-169	6e-15	80.1	178	34.27
ATR_00103G00480	Amborella trichopoda	7e-14	75.9	76	52.63
ccr187640	Chondrus crispus	1e-12	73.2	164	31.10
PP00041G00100	Physcomitrella patens	2e-11	69.7	91	38.46
SPACUNK4.12c	Schizosaccharomyces pombe	6e-11	67.8	103	36.89
AC00G77970	Asterochloris sp. Cgr-DA1pho v2.0	2e-10	66.2	143	29.37
AP00G39880	Auxenochlorella protothecoides	1e-09	64.3	104	35.58
Naga_100179g9	Nannochloropsis gaditana	1e-09	63.9	149	26.85
CNC64A_010G00200	Chlorella sp NC64A	1e-09	63.5	78	44.87
FBgn0001247	Drosophila melanogaster	9e-09	61.2	140	25.71
WBGene00018426	Caenorhabditis elegans	1e-08	60.8	87	27.59
AT1G06900	Arabidopsis thaliana	2e-08	60.1	102	35.29
OS03G21810	Oryza sativa	4e-08	58.9	91	37.36
CNC64A_020G01430	Chlorella sp NC64A	6e-08	58.5	88	37.50
PI00G04990	Picochlorum sp. SENEW3 (SE3)	9e-08	58.2	158	27.85
RCC4223.07g01010	Picochlorum_RCC4223	9e-08	57.8	171	26.32
PTI_15G02190	Phaeodactylum tricornutum	2e-07	57.0	176	23.30
RCC4223.06g03380	Picochlorum_RCC4223	2e-07	56.6	98	32.65
WBGene00015360	Caenorhabditis elegans	6e-07	55.5	87	28.74
TP05G01220	Thalassiosira pseudonana	6e-07	55.5	224	22.77
FC068G00120	Fragilariopsis cylindrus	7e-07	55.1	160	23.75
gsu132620	Galdieria sulphuraria	7e-07	55.1	204	22.55
PI00G62360	Picochlorum sp. SENEW3 (SE3)	9e-07	54.7	97	29.90
Naga_102945g1	Nannochloropsis gaditana	1e-06	52.0	137	23.36
WBGene00013492	Caenorhabditis elegans	1e-06	54.7	144	24.31
FC024G00560	Fragilariopsis cylindrus	2e-06	53.5	189	22.75
pte659880	Paramecium tetraurelia	2e-06	53.5	141	26.24
phs291240	Phytophtora sojae	3e-06	53.1	207	22.22
PP00045G00480	Physcomitrella patens	3e-06	53.1	91	30.77
FC004G01490	Fragilariopsis cylindrus	3e-06	53.1	141	24.11
WBGene00015359	Caenorhabditis elegans	3e-06	53.1	87	26.44
ATR_01227G00010	Amborella trichopoda	5e-06	51.6	37	56.76
phs369270	Phytophtora sojae	6e-06	52.4	75	41.33
ES1103G00010	Ectocarpus siliculosus	6e-06	51.6	101	32.67
PTI_32G00130	Phaeodactylum tricornutum	8e-06	52.0	121	28.10

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment