Interactive Phylogenetics Module

Gene Id
AT3G53420

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]
Include Gene ID Organism E-value Bitscore Alignment Length Identity Percentage
AT3G53420 Arabidopsis thaliana 0.0 577 288 100.00
AT2G37170 Arabidopsis thaliana 0.0 537 288 93.40
AT2G37180 Arabidopsis thaliana 0.0 527 288 90.97
AT5G60660 Arabidopsis thaliana 5e-169 477 283 82.69
ATR_00148G00090 Amborella trichopoda 3e-162 459 288 78.47
AT3G54820 Arabidopsis thaliana 1e-161 458 288 78.12
OS07G26690 Oryza sativa 2e-160 455 275 83.27
OS07G26660 Oryza sativa 6e-160 454 287 79.44
OS02G41860 Oryza sativa 8e-160 454 273 83.15
PP00055G01410 Physcomitrella patens 8e-160 453 284 80.28
PP00008G00840 Physcomitrella patens 2e-159 452 284 79.23
OS04G44060 Oryza sativa 2e-159 453 289 80.28
AT2G39010 Arabidopsis thaliana 8e-159 451 283 77.39
OS07G26630 Oryza sativa 1e-158 451 287 78.75
AT2G16850 Arabidopsis thaliana 3e-157 447 283 78.09
AT4G35100 Arabidopsis thaliana 1e-153 438 286 76.57
ATR_00152G00090 Amborella trichopoda 1e-153 438 283 77.39
PP00267G00250 Physcomitrella patens 1e-153 437 273 79.85
ATR_00155G00350 Amborella trichopoda 2e-148 425 285 77.19
PP00118G01050 Physcomitrella patens 1e-147 422 274 73.72
PP00118G01040 Physcomitrella patens 1e-147 422 274 73.72
AT4G00430 Arabidopsis thaliana 2e-136 394 262 74.43
ATR_00029G03570 Amborella trichopoda 3e-135 391 264 71.21
OS04G47220 Oryza sativa 1e-134 390 267 71.91
OS02G44630 Oryza sativa 1e-133 387 262 72.14
ATR_00009G01820 Amborella trichopoda 7e-133 385 257 72.37
AT4G23400 Arabidopsis thaliana 2e-130 379 264 74.24
PP00001G02500 Physcomitrella patens 5e-130 379 258 71.71
OS04G16450 Oryza sativa 2e-129 379 248 76.61
AT1G01620 Arabidopsis thaliana 3e-129 376 269 73.98
OS02G57720 Oryza sativa 1e-128 375 267 68.91
OS09G36930 Oryza sativa 2e-128 374 283 65.37
PP00305G00060 Physcomitrella patens 2e-128 374 265 70.19
PP00102G00520 Physcomitrella patens 2e-127 371 258 72.87
AT3G61430 Arabidopsis thaliana 4e-127 370 262 73.66
OS03G64330 Oryza sativa 1e-122 359 265 66.79
AT2G45960 Arabidopsis thaliana 5e-117 345 233 72.96
OS10G34000 Oryza sativa 1e-111 331 269 61.34
PP00017G01190 Physcomitrella patens 1e-103 310 272 59.19
OS07G26640 Oryza sativa 7e-91 276 166 83.13
CV00G37810 Coccomyxa subellipsoidea C-169 2e-70 226 266 45.11
ENSG00000240583 Homo sapiens 5e-56 188 241 46.06
ENSMUSG00000004655 Mus musculus 3e-53 181 241 43.57
AC00G97990 Asterochloris sp. Cgr-DA1pho v2.0 5e-52 180 294 37.41
ES0009G00400 Ectocarpus siliculosus 1e-48 169 237 43.88
AC00G98000 Asterochloris sp. Cgr-DA1pho v2.0 7e-48 167 194 46.91
CV00G28330 Coccomyxa subellipsoidea C-169 4e-46 159 172 48.84
ES0009G00070 Ectocarpus siliculosus 2e-42 152 239 38.91
ENSMUSG00000024411 Mus musculus 3e-42 153 235 40.43
emh577430 Emiliania huxleyi 8e-41 147 229 40.61
PP00156G00850 Physcomitrella patens 2e-40 147 246 40.65
Naga_100052g4 Nannochloropsis gaditana 8e-40 147 247 38.87
ENSMUSG00000044217 Mus musculus 1e-39 145 241 37.76
PP00101G01240 Physcomitrella patens 1e-39 144 230 40.87
PP00044G00170 Physcomitrella patens 6e-39 143 233 40.77
ENSG00000167580 Homo sapiens 1e-36 137 240 36.25
ENSMUSG00000023013 Mus musculus 2e-36 136 248 37.90
ENSG00000161798 Homo sapiens 4e-36 135 241 37.76
emh155290 Emiliania huxleyi 5e-36 136 247 41.30
FC017G02320 Fragilariopsis cylindrus 9e-36 134 236 38.56
WBGene00000174 Caenorhabditis elegans 2e-35 134 251 37.05
ATR_00106G01240 Amborella trichopoda 3e-35 133 236 37.29
ATR_00102G00270 Amborella trichopoda 9e-35 132 241 38.17
ENSMUSG00000025389 Mus musculus 3e-34 130 240 34.17
AT3G26520 Arabidopsis thaliana 1e-33 129 236 39.83
ATR_00109G01560 Amborella trichopoda 2e-33 128 232 39.66
AP00G04850 Auxenochlorella protothecoides 3e-33 129 252 38.10
OS01G74450 Oryza sativa 4e-33 127 241 37.76
AT3G16240 Arabidopsis thaliana 5e-33 127 240 40.00
ATR_00171G00280 Amborella trichopoda 1e-32 126 239 36.82
AT5G47450 Arabidopsis thaliana 1e-32 125 237 39.24
OS06G22960 Oryza sativa 4e-32 124 232 38.36
PP00184G00510 Physcomitrella patens 5e-32 124 243 39.09
ATR_00109G01550 Amborella trichopoda 5e-32 124 236 35.17
AT4G01470 Arabidopsis thaliana 9e-32 124 253 37.55
AA0016G01160 Aureococcus anophagefferens 4e-31 122 238 35.29
FBgn0033635 Drosophila melanogaster 5e-31 122 248 37.10
AT1G73190 Arabidopsis thaliana 9e-31 121 236 37.29
AT2G36830 Arabidopsis thaliana 1e-30 120 242 36.78
FBgn0034883 Drosophila melanogaster 2e-30 121 271 29.52
AT2G25810 Arabidopsis thaliana 8e-30 118 243 36.63
WBGene00000172 Caenorhabditis elegans 2e-29 117 237 35.02
PI00G40170 Picochlorum sp. SENEW3 (SE3) 2e-29 118 191 41.88
RCC4223.07g02360 Picochlorum_RCC4223 3e-29 119 264 37.12
AT1G17810 Arabidopsis thaliana 4e-29 117 235 37.02
OS02G44080 Oryza sativa 1e-28 115 249 37.35
FBgn0015872 Drosophila melanogaster 1e-27 113 246 31.71
OS10G35050 Oryza sativa 1e-27 112 234 34.62
OS03G05290 Oryza sativa 4e-27 111 243 35.80
AT4G17340 Arabidopsis thaliana 6e-27 110 237 37.13
DDB_G0279443 Dictyostelium discoideum 2e-26 109 285 27.72
PTI_01G01680 Phaeodactylum tricornutum 3e-25 107 254 30.71
AT3G47440 Arabidopsis thaliana 8e-24 102 234 32.91
YPR192W Saccharomyces cerevisiae strain S288C 1e-23 102 225 33.78
emh387580 Emiliania huxleyi 2e-23 101 241 34.44
OS04G44570 Oryza sativa 2e-23 101 240 34.58
emh198470 Emiliania huxleyi 4e-23 101 283 33.57
DDB_G0267378 Dictyostelium discoideum 1e-22 99.0 268 30.22
ENSMUSG00000043144 Mus musculus 1e-22 99.0 237 33.76
DDB_G0280537 Dictyostelium discoideum 2e-22 98.2 248 33.06
OS04G46490 Oryza sativa 6e-22 96.7 236 33.47
OS01G13120 Oryza sativa 1e-21 95.9 237 32.07
OS05G14240 Oryza sativa 2e-21 95.5 241 30.71
CNC64A_022G01110 Chlorella sp NC64A 2e-21 92.8 153 38.56
ENSG00000103375 Homo sapiens 3e-21 94.7 238 30.67
CR12G15220 Chlamydomonas reinhardtii 1e-20 93.6 242 33.47
OS01G13130 Oryza sativa 1e-20 92.8 182 34.07
FBgn0034884 Drosophila melanogaster 3e-20 92.0 268 27.99
PP00091G00150 Physcomitrella patens 7e-20 90.9 254 29.53
CNC64A_009G02430 Chlorella sp NC64A 1e-19 90.1 244 31.97
PP00031G00390 Physcomitrella patens 4e-19 89.7 272 30.88
VC00G44210 Volvox carteri 8e-19 87.8 242 31.82
ENSMUSG00000030762 Mus musculus 4e-18 85.5 224 29.02
AC00G21540 Asterochloris sp. Cgr-DA1pho v2.0 4e-18 85.5 175 37.14
FBgn0034885 Drosophila melanogaster 6e-18 85.1 193 32.64
PP00013G02380 Physcomitrella patens 6e-18 85.1 296 25.34
ATR_00010G04460 Amborella trichopoda 2e-17 83.2 245 31.02
AT4G19030 Arabidopsis thaliana 6e-17 82.4 259 27.03
CV00G81290 Coccomyxa subellipsoidea C-169 1e-16 80.5 175 36.00
phs98060 Phytophtora sojae 1e-16 81.6 291 28.18
AC00G78730 Asterochloris sp. Cgr-DA1pho v2.0 1e-16 80.9 180 31.11
OS02G51110 Oryza sativa 2e-16 80.9 285 27.02
PP00037G01200 Physcomitrella patens 2e-16 80.9 234 26.07
ATR_00106G01260 Amborella trichopoda 3e-16 77.0 101 46.53
ATR_00162G00340 Amborella trichopoda 6e-16 79.7 237 25.32
CV00G20230 Coccomyxa subellipsoidea C-169 8e-16 80.5 191 29.84
YLL053C Saccharomyces cerevisiae strain S288C 1e-15 76.6 104 44.23
ccr29120 Chondrus crispus 2e-15 80.9 256 27.34
AT5G37820 Arabidopsis thaliana 3e-15 77.4 189 29.10
PP00076G00120 Physcomitrella patens 5e-15 78.2 239 27.20
CNC64A_019G01580 Chlorella sp NC64A 6e-15 76.3 178 32.02
AC00G86340 Asterochloris sp. Cgr-DA1pho v2.0 1e-14 77.0 276 27.54
ORCC809_03G01220 Ostreococcus sp RCC809 2e-14 73.6 178 31.46
AC00G37990 Asterochloris sp. Cgr-DA1pho v2.0 2e-14 73.6 173 34.68
OS06G12310 Oryza sativa 2e-14 75.1 274 25.91
FC023G01010 Fragilariopsis cylindrus 2e-14 74.7 257 28.40
ATR_00147G00120 Amborella trichopoda 3e-14 74.3 197 28.43
gsu139390 Galdieria sulphuraria 5e-14 75.1 280 27.86
phs14320 Phytophtora sojae 7e-14 73.9 204 29.90
ATR_00065G01410 Amborella trichopoda 7e-14 73.9 224 28.57
AT1G80760 Arabidopsis thaliana 7e-14 73.9 250 27.60
gsu07990 Galdieria sulphuraria 8e-14 74.7 280 27.50
phs14340 Phytophtora sojae 8e-14 73.2 229 27.95
AC00G91100 Asterochloris sp. Cgr-DA1pho v2.0 1e-13 73.6 234 24.36
CV00G27520 Coccomyxa subellipsoidea C-169 3e-13 71.6 245 30.20
phs98190 Phytophtora sojae 4e-13 72.0 204 29.41
AT1G31885 Arabidopsis thaliana 5e-13 71.6 252 25.79
AT4G18910 Arabidopsis thaliana 6e-13 71.2 236 25.85
WBGene00000170 Caenorhabditis elegans 6e-13 71.2 253 27.27
gsu04110 Galdieria sulphuraria 1e-12 71.2 209 31.10
PTI_05G02140 Phaeodactylum tricornutum 2e-12 70.9 283 25.80
OS02G13870 Oryza sativa 2e-12 69.7 219 27.85
AT5G37810 Arabidopsis thaliana 2e-12 69.3 189 28.04
OS10G36924 Oryza sativa 4e-12 69.3 250 28.00
AT4G10380 Arabidopsis thaliana 6e-12 68.6 226 27.88
WBGene00000169 Caenorhabditis elegans 7e-12 68.2 254 27.17
pte778710 Paramecium tetraurelia 9e-12 67.4 255 26.27
AT3G06100 Arabidopsis thaliana 1e-11 67.4 236 30.08
phs301590 Phytophtora sojae 1e-11 67.0 204 28.43
YFL054C Saccharomyces cerevisiae strain S288C 1e-11 68.6 214 33.18
phs98210 Phytophtora sojae 2e-11 67.0 204 28.43
phs13060 Phytophtora sojae 2e-11 66.6 254 25.98
phs15860 Phytophtora sojae 2e-11 66.2 204 28.43
phs99230 Phytophtora sojae 2e-11 66.6 260 26.54
OS06G35930 Oryza sativa 2e-11 66.6 277 28.16
DDB_G0274209 Dictyostelium discoideum 2e-11 67.4 263 26.24
phs299360 Phytophtora sojae 2e-11 65.9 251 24.30
OS08G05590 Oryza sativa 3e-11 66.6 239 28.45
phs14300 Phytophtora sojae 3e-11 66.6 229 26.20
ENSG00000165272 Homo sapiens 4e-11 66.2 271 25.46
PTI_10G00410 Phaeodactylum tricornutum 6e-11 65.5 216 30.56
ATR_00038G01220 Amborella trichopoda 7e-11 64.3 193 29.02
AT2G34390 Arabidopsis thaliana 9e-11 65.1 195 28.21
SPAC977.17 Schizosaccharomyces pombe 1e-10 65.5 217 31.34
OS08G05600 Oryza sativa 2e-10 63.9 224 28.12
phs99750 Phytophtora sojae 3e-10 63.5 241 28.63
AC00G86350 Asterochloris sp. Cgr-DA1pho v2.0 3e-10 63.9 276 26.45
phs97960 Phytophtora sojae 5e-10 63.2 257 24.90
ATR_00045G00270 Amborella trichopoda 6e-10 62.0 186 27.96
PP00258G00320 Physcomitrella patens 8e-10 62.4 223 26.46
ENSG00000103569 Homo sapiens 8e-10 62.4 264 25.38
ATR_00001G00560 Amborella trichopoda 8e-10 62.4 236 26.69
pte618720 Paramecium tetraurelia 1e-09 61.6 198 27.78
FC008G02240 Fragilariopsis cylindrus 1e-09 62.0 175 29.14
PP00032G01630 Physcomitrella patens 1e-09 62.4 261 28.74
PP00006G01130 Physcomitrella patens 1e-09 59.3 74 47.30
ATR_00050G00370 Amborella trichopoda 2e-09 60.5 199 30.15
ORCC809_11G00060 Ostreococcus sp RCC809 2e-09 61.2 236 25.42
WBGene00000173 Caenorhabditis elegans 2e-09 61.6 293 21.50
CNC64A_032G01040 Chlorella sp NC64A 2e-09 57.4 74 44.59
OL12G00450 Ostreococcus lucimarinus 3e-09 60.5 242 26.45
WBGene00000176 Caenorhabditis elegans 6e-09 59.7 269 27.51
OS05G11560 Oryza sativa 7e-09 59.3 263 26.62
phs99710 Phytophtora sojae 8e-09 58.9 248 29.44
WBGene00000171 Caenorhabditis elegans 2e-08 58.9 216 27.31
phs98110 Phytophtora sojae 2e-08 57.8 144 31.25
phs99190 Phytophtora sojae 2e-08 57.8 260 26.15
OS01G10600 Oryza sativa 3e-08 58.2 274 22.99
phs99250 Phytophtora sojae 3e-08 57.8 248 25.81
OS12G10280 Oryza sativa 4e-08 57.8 249 26.51
AC00G36140 Asterochloris sp. Cgr-DA1pho v2.0 6e-08 57.0 238 24.37
PTI_00G03490 Phaeodactylum tricornutum 1e-07 56.2 218 29.82
emh734690 Emiliania huxleyi 1e-07 56.2 217 30.88
AA0023G00950 Aureococcus anophagefferens 2e-07 55.1 175 30.86
WBGene00000175 Caenorhabditis elegans 3e-07 54.7 256 26.56
phs98000 Phytophtora sojae 3e-07 54.3 163 25.15
CNC64A_006G04160 Chlorella sp NC64A 7e-07 50.8 56 46.43
CNC64A_416G00010 7e-07 50.8 56 46.43
OS01G08660 Oryza sativa 9e-07 53.1 122 27.05
phs99210 Phytophtora sojae 9e-07 52.8 201 24.88
phs282320 Phytophtora sojae 1e-06 52.8 243 23.87
CR01G08410 Chlamydomonas reinhardtii 2e-06 52.4 255 23.92
pte523950 Paramecium tetraurelia 2e-06 52.0 235 26.38
Naga_100379g5 Nannochloropsis gaditana 2e-06 52.8 114 36.84
phs97840 Phytophtora sojae 3e-06 52.0 209 24.88
pte334620 Paramecium tetraurelia 3e-06 51.2 145 25.52
YLL043W Saccharomyces cerevisiae strain S288C 4e-06 52.0 306 23.20
pte552360 Paramecium tetraurelia 5e-06 50.8 184 26.63
pte277980 Paramecium tetraurelia 6e-06 50.4 145 25.52

Amborella trichopoda (19 genes)
Arabidopsis thaliana (32 genes)
Asterochloris sp. Cgr-DA1pho v2.0 (9 genes)
Aureococcus anophagefferens (2 genes)
Auxenochlorella protothecoides (1 genes)
Bathycoccus prasinos (0 genes)
Caenorhabditis elegans (8 genes)
Chlamydomonas reinhardtii (2 genes)
Chlorella sp NC64A (5 genes)
Chondrus crispus (1 genes)
Coccomyxa subellipsoidea C-169 (5 genes)
Cyanidioschyzon merolae (0 genes)
Dictyostelium discoideum (4 genes)
Drosophila melanogaster (5 genes)
Ectocarpus siliculosus (2 genes)
Emiliania huxleyi (5 genes)
Fragilariopsis cylindrus (3 genes)
Galdieria sulphuraria (3 genes)
Helicosporidium sp. (0 genes)
Homo sapiens (6 genes)
Micromonas pusilla strain CCMP1545 (0 genes)
Micromonas sp RCC299 (0 genes)
Mus musculus (7 genes)
Nannochloropsis gaditana (2 genes)
Oryza sativa (34 genes)
Ostreococcus lucimarinus (1 genes)
Ostreococcus mediterraneus (0 genes)
Ostreococcus sp RCC809 (2 genes)
Ostreococcus tauri (0 genes)
Paramecium tetraurelia (6 genes)
Phaeodactylum tricornutum (4 genes)
Physcomitrella patens (21 genes)
Phytophtora sojae (21 genes)
Picochlorum sp. SENEW3 (SE3) (1 genes)
Picochlorum_RCC4223 (1 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (1 genes)
Thalassiosira pseudonana (0 genes)
Volvox carteri (1 genes)