Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G19290	Arabidopsis thaliana	0.0	877	433	100.00
AT1G49720	Arabidopsis thaliana	3e-152	445	412	63.83
AT4G34000	Arabidopsis thaliana	2e-104	324	484	46.90
ATR_00132G00190	Amborella trichopoda	5e-90	288	529	41.59
AT1G45249	Arabidopsis thaliana	1e-80	262	443	43.57
OS02G52780	Oryza sativa	3e-42	158	165	56.36
OS09G28310	Oryza sativa	5e-39	149	167	56.89
OS08G36790	Oryza sativa	5e-37	143	114	64.91
PP00009G01290	Physcomitrella patens	1e-36	141	148	54.73
AT5G42910	Arabidopsis thaliana	1e-34	137	415	31.08
OS01G59760	Oryza sativa	2e-34	135	368	34.24
OS06G10880	Oryza sativa	1e-33	133	141	58.87
ATR_00114G00100	Amborella trichopoda	1e-30	125	150	50.00
AT3G56850	Arabidopsis thaliana	9e-29	119	157	48.41
OS01G64000	Oryza sativa	2e-26	113	152	45.39
ATR_00040G00270	Amborella trichopoda	2e-25	109	184	39.13
AT2G41070	Arabidopsis thaliana	9e-24	103	155	43.87
OS05G41070	Oryza sativa	6e-21	96.7	142	44.37
AT3G44460	Arabidopsis thaliana	4e-20	94.4	143	44.06
PP00049G00710	Physcomitrella patens	2e-19	94.0	75	64.00
AT2G36270	Arabidopsis thaliana	9e-19	92.0	187	39.04
ATR_00010G02590	Amborella trichopoda	2e-13	73.6	57	63.16
OS07G48660	Oryza sativa	4e-13	73.2	52	67.31
ATR_00101G00100	Amborella trichopoda	4e-12	70.9	60	58.33
OS09G36910	Oryza sativa	7e-12	68.6	82	50.00
AT4G35900	Arabidopsis thaliana	4e-11	67.0	95	44.21
ATR_00152G00260	Amborella trichopoda	8e-11	65.9	86	47.67
OS03G20650	Oryza sativa	1e-10	65.1	46	67.39
AT2G17770	Arabidopsis thaliana	1e-10	64.3	66	57.58
AT5G44080	Arabidopsis thaliana	1e-10	66.2	102	44.12
CV00G72360	Coccomyxa subellipsoidea C-169	3e-10	65.5	179	32.96
ATR_00061G01870	Amborella trichopoda	8e-10	61.6	101	39.60
OS05G36160	Oryza sativa	1e-09	62.4	84	46.43
AT1G03970	Arabidopsis thaliana	2e-09	62.4	61	54.10
AC00G36350	Asterochloris sp. Cgr-DA1pho v2.0	3e-09	62.4	111	35.14
ATR_00061G00920	Amborella trichopoda	4e-09	59.3	56	55.36
OS01G64730	Oryza sativa	1e-08	59.7	104	39.42
ENSMUSG00000026663	Mus musculus	4e-08	59.3	123	39.02
ENSG00000118217	Homo sapiens	9e-08	58.5	123	38.21
AT5G60830	Arabidopsis thaliana	1e-07	55.8	65	46.15
OS08G43600	Oryza sativa	3e-07	53.9	44	61.36
OS06G50600	Oryza sativa	4e-07	53.5	49	53.06
OS06G50830	Oryza sativa	4e-07	53.5	49	53.06
OS06G50480	Oryza sativa	6e-07	53.1	55	49.09
AT3G30530	Arabidopsis thaliana	6e-07	53.1	65	47.69
PI00G56670	Picochlorum sp. SENEW3 (SE3)	1e-06	53.9	53	50.94
OS12G40920	Oryza sativa	1e-06	53.9	53	47.17
RCC4223.01g11620	Picochlorum_RCC4223	2e-06	53.1	52	50.00
AT1G13600	Arabidopsis thaliana	4e-06	51.2	67	41.79
AP00G08380	Auxenochlorella protothecoides	6e-06	51.6	44	54.55
AT5G15830	Arabidopsis thaliana	7e-06	50.1	84	38.10

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment