|
CNC64A_733G00010 |
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT3G15620' => array(
'gene_id' => 'AT3G15620',
'e_value' => '0.0',
'bit_score' => '1158',
'alignment_length' => '557',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00042G00260' => array(
'gene_id' => 'ATR_00042G00260',
'e_value' => '0.0',
'bit_score' => '780',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS02G10990' => array(
'gene_id' => 'OS02G10990',
'e_value' => '0.0',
'bit_score' => '731',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00012G00840' => array(
'gene_id' => 'PP00012G00840',
'e_value' => '0.0',
'bit_score' => '690',
'alignment_length' => '514',
'identity_percentage' => '62.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G06480' => array(
'gene_id' => 'CV00G06480',
'e_value' => '0.0',
'bit_score' => '587',
'alignment_length' => '484',
'identity_percentage' => '57.02',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.10g00560' => array(
'gene_id' => 'RCC4223.10g00560',
'e_value' => '0.0',
'bit_score' => '569',
'alignment_length' => '525',
'identity_percentage' => '53.52',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_031G00590' => array(
'gene_id' => 'CNC64A_031G00590',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '504',
'identity_percentage' => '55.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PI00G34380' => array(
'gene_id' => 'PI00G34380',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '534',
'identity_percentage' => '53.56',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'CR06G08080' => array(
'gene_id' => 'CR06G08080',
'e_value' => '0.0',
'bit_score' => '567',
'alignment_length' => '504',
'identity_percentage' => '53.77',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'AC00G14670' => array(
'gene_id' => 'AC00G14670',
'e_value' => '0.0',
'bit_score' => '558',
'alignment_length' => '505',
'identity_percentage' => '54.46',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G03120' => array(
'gene_id' => 'MRCC299_10G03120',
'e_value' => '0.0',
'bit_score' => '541',
'alignment_length' => '552',
'identity_percentage' => '49.09',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'VC00G69290' => array(
'gene_id' => 'VC00G69290',
'e_value' => '0.0',
'bit_score' => '540',
'alignment_length' => '503',
'identity_percentage' => '52.49',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G00330' => array(
'gene_id' => 'OM_03G00330',
'e_value' => '0.0',
'bit_score' => '530',
'alignment_length' => '556',
'identity_percentage' => '47.84',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G00290' => array(
'gene_id' => 'OT_05G00290',
'e_value' => '3e-179',
'bit_score' => '525',
'alignment_length' => '553',
'identity_percentage' => '47.02',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP09G02830' => array(
'gene_id' => 'MP09G02830',
'e_value' => '3e-177',
'bit_score' => '519',
'alignment_length' => '552',
'identity_percentage' => '49.64',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000020038' => array(
'gene_id' => 'ENSMUSG00000020038',
'e_value' => '6e-175',
'bit_score' => '515',
'alignment_length' => '501',
'identity_percentage' => '50.30',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000008405' => array(
'gene_id' => 'ENSG00000008405',
'e_value' => '7e-175',
'bit_score' => '514',
'alignment_length' => '501',
'identity_percentage' => '50.50',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068742' => array(
'gene_id' => 'ENSMUSG00000068742',
'e_value' => '1e-171',
'bit_score' => '506',
'alignment_length' => '502',
'identity_percentage' => '50.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'OL05G00260' => array(
'gene_id' => 'OL05G00260',
'e_value' => '1e-170',
'bit_score' => '503',
'alignment_length' => '545',
'identity_percentage' => '46.42',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0016054' => array(
'gene_id' => 'FBgn0016054',
'e_value' => '5e-168',
'bit_score' => '495',
'alignment_length' => '515',
'identity_percentage' => '47.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G00280' => array(
'gene_id' => 'ORCC809_05G00280',
'e_value' => '9e-167',
'bit_score' => '523',
'alignment_length' => '557',
'identity_percentage' => '46.32',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100161g13' => array(
'gene_id' => 'Naga_100161g13',
'e_value' => '5e-166',
'bit_score' => '492',
'alignment_length' => '533',
'identity_percentage' => '47.28',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'gsu79870' => array(
'gene_id' => 'gsu79870',
'e_value' => '2e-161',
'bit_score' => '479',
'alignment_length' => '517',
'identity_percentage' => '45.45',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM15G03480' => array(
'gene_id' => 'CM15G03480',
'e_value' => '4e-160',
'bit_score' => '474',
'alignment_length' => '524',
'identity_percentage' => '46.37',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'emh83630' => array(
'gene_id' => 'emh83630',
'e_value' => '4e-158',
'bit_score' => '468',
'alignment_length' => '488',
'identity_percentage' => '47.95',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh539160' => array(
'gene_id' => 'emh539160',
'e_value' => '2e-155',
'bit_score' => '466',
'alignment_length' => '487',
'identity_percentage' => '47.84',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ES0194G00110' => array(
'gene_id' => 'ES0194G00110',
'e_value' => '9e-155',
'bit_score' => '461',
'alignment_length' => '501',
'identity_percentage' => '49.50',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_03G00300' => array(
'gene_id' => 'BPRRCC1105_03G00300',
'e_value' => '9e-145',
'bit_score' => '437',
'alignment_length' => '580',
'identity_percentage' => '42.93',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PTI_08G03200' => array(
'gene_id' => 'PTI_08G03200',
'e_value' => '4e-139',
'bit_score' => '422',
'alignment_length' => '520',
'identity_percentage' => '44.04',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ccr31740' => array(
'gene_id' => 'ccr31740',
'e_value' => '8e-129',
'bit_score' => '395',
'alignment_length' => '521',
'identity_percentage' => '41.65',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'phs372210' => array(
'gene_id' => 'phs372210',
'e_value' => '7e-128',
'bit_score' => '391',
'alignment_length' => '546',
'identity_percentage' => '39.01',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'phs349220' => array(
'gene_id' => 'phs349220',
'e_value' => '5e-123',
'bit_score' => '378',
'alignment_length' => '523',
'identity_percentage' => '40.54',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'phs349300' => array(
'gene_id' => 'phs349300',
'e_value' => '1e-114',
'bit_score' => '363',
'alignment_length' => '559',
'identity_percentage' => '37.57',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0025680' => array(
'gene_id' => 'FBgn0025680',
'e_value' => '1e-105',
'bit_score' => '335',
'alignment_length' => '533',
'identity_percentage' => '35.27',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'AA0003G05580' => array(
'gene_id' => 'AA0003G05580',
'e_value' => '8e-92',
'bit_score' => '298',
'alignment_length' => '519',
'identity_percentage' => '37.96',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh159140' => array(
'gene_id' => 'emh159140',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh547370' => array(
'gene_id' => 'emh547370',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g00760' => array(
'gene_id' => 'RCC4223.07g00760',
'e_value' => '2e-52',
'bit_score' => '194',
'alignment_length' => '494',
'identity_percentage' => '30.16',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PI00G04790' => array(
'gene_id' => 'PI00G04790',
'e_value' => '5e-52',
'bit_score' => '193',
'alignment_length' => '494',
'identity_percentage' => '29.76',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'OS02G41550' => array(
'gene_id' => 'OS02G41550',
'e_value' => '6e-51',
'bit_score' => '190',
'alignment_length' => '548',
'identity_percentage' => '29.38',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'MP13G00590' => array(
'gene_id' => 'MP13G00590',
'e_value' => '5e-50',
'bit_score' => '186',
'alignment_length' => '515',
'identity_percentage' => '29.71',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'AT1G04400' => array(
'gene_id' => 'AT1G04400',
'e_value' => '7e-50',
'bit_score' => '186',
'alignment_length' => '505',
'identity_percentage' => '30.69',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00148G00690' => array(
'gene_id' => 'ATR_00148G00690',
'e_value' => '1e-49',
'bit_score' => '186',
'alignment_length' => '542',
'identity_percentage' => '29.52',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G11930' => array(
'gene_id' => 'AC00G11930',
'e_value' => '7e-49',
'bit_score' => '182',
'alignment_length' => '485',
'identity_percentage' => '28.04',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'OM_01G00240' => array(
'gene_id' => 'OM_01G00240',
'e_value' => '3e-47',
'bit_score' => '178',
'alignment_length' => '513',
'identity_percentage' => '30.02',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PP00002G01920' => array(
'gene_id' => 'PP00002G01920',
'e_value' => '5e-47',
'bit_score' => '179',
'alignment_length' => '512',
'identity_percentage' => '27.73',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC007G01830' => array(
'gene_id' => 'FC007G01830',
'e_value' => '9e-47',
'bit_score' => '177',
'alignment_length' => '507',
'identity_percentage' => '29.98',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'AT5G24850' => array(
'gene_id' => 'AT5G24850',
'e_value' => '7e-46',
'bit_score' => '174',
'alignment_length' => '462',
'identity_percentage' => '29.44',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PI00G51840' => array(
'gene_id' => 'PI00G51840',
'e_value' => '1e-45',
'bit_score' => '173',
'alignment_length' => '539',
'identity_percentage' => '28.94',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'VC00G59430' => array(
'gene_id' => 'VC00G59430',
'e_value' => '2e-45',
'bit_score' => '176',
'alignment_length' => '489',
'identity_percentage' => '28.02',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G00130' => array(
'gene_id' => 'MRCC299_10G00130',
'e_value' => '4e-44',
'bit_score' => '168',
'alignment_length' => '510',
'identity_percentage' => '29.02',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'gsu109050' => array(
'gene_id' => 'gsu109050',
'e_value' => '5e-44',
'bit_score' => '172',
'alignment_length' => '517',
'identity_percentage' => '28.05',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'OS06G45100' => array(
'gene_id' => 'OS06G45100',
'e_value' => '7e-44',
'bit_score' => '169',
'alignment_length' => '468',
'identity_percentage' => '29.91',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.08g01600' => array(
'gene_id' => 'RCC4223.08g01600',
'e_value' => '7e-43',
'bit_score' => '166',
'alignment_length' => '530',
'identity_percentage' => '29.43',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ES0002G00990' => array(
'gene_id' => 'ES0002G00990',
'e_value' => '2e-42',
'bit_score' => '164',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OS04G37920' => array(
'gene_id' => 'OS04G37920',
'e_value' => '2e-42',
'bit_score' => '165',
'alignment_length' => '530',
'identity_percentage' => '29.06',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00488G00050' => array(
'gene_id' => 'PP00488G00050',
'e_value' => '3e-42',
'bit_score' => '164',
'alignment_length' => '498',
'identity_percentage' => '28.11',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CR06G12190' => array(
'gene_id' => 'CR06G12190',
'e_value' => '1e-41',
'bit_score' => '165',
'alignment_length' => '498',
'identity_percentage' => '27.11',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OS02G36380' => array(
'gene_id' => 'OS02G36380',
'e_value' => '4e-41',
'bit_score' => '162',
'alignment_length' => '546',
'identity_percentage' => '28.94',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02490' => array(
'gene_id' => 'CNC64A_008G02490',
'e_value' => '6e-41',
'bit_score' => '163',
'alignment_length' => '518',
'identity_percentage' => '28.76',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'ES0002G02030' => array(
'gene_id' => 'ES0002G02030',
'e_value' => '2e-40',
'bit_score' => '158',
'alignment_length' => '508',
'identity_percentage' => '28.74',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0004G04420' => array(
'gene_id' => 'AA0004G04420',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '463',
'identity_percentage' => '27.43',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08260' => array(
'gene_id' => 'CV00G08260',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '492',
'identity_percentage' => '27.24',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_01G00210' => array(
'gene_id' => 'ORCC809_01G00210',
'e_value' => '9e-39',
'bit_score' => '155',
'alignment_length' => '515',
'identity_percentage' => '27.77',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AC00G22630' => array(
'gene_id' => 'AC00G22630',
'e_value' => '1e-38',
'bit_score' => '153',
'alignment_length' => '537',
'identity_percentage' => '26.07',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'TP06G00790' => array(
'gene_id' => 'TP06G00790',
'e_value' => '4e-38',
'bit_score' => '151',
'alignment_length' => '522',
'identity_percentage' => '28.54',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'AT4G08920' => array(
'gene_id' => 'AT4G08920',
'e_value' => '4e-38',
'bit_score' => '152',
'alignment_length' => '528',
'identity_percentage' => '27.84',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'emh295050' => array(
'gene_id' => 'emh295050',
'e_value' => '5e-38',
'bit_score' => '150',
'alignment_length' => '498',
'identity_percentage' => '27.31',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OT_01G06510' => array(
'gene_id' => 'OT_01G06510',
'e_value' => '5e-37',
'bit_score' => '148',
'alignment_length' => '517',
'identity_percentage' => '28.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100190g4' => array(
'gene_id' => 'Naga_100190g4',
'e_value' => '5e-37',
'bit_score' => '149',
'alignment_length' => '510',
'identity_percentage' => '27.06',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'gsu129520' => array(
'gene_id' => 'gsu129520',
'e_value' => '8e-37',
'bit_score' => '147',
'alignment_length' => '525',
'identity_percentage' => '26.29',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM10G01320' => array(
'gene_id' => 'CM10G01320',
'e_value' => '1e-36',
'bit_score' => '148',
'alignment_length' => '544',
'identity_percentage' => '27.39',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_14G00970' => array(
'gene_id' => 'BPRRCC1105_14G00970',
'e_value' => '1e-36',
'bit_score' => '147',
'alignment_length' => '500',
'identity_percentage' => '30.20',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'OL01G06630' => array(
'gene_id' => 'OL01G06630',
'e_value' => '3e-36',
'bit_score' => '145',
'alignment_length' => '516',
'identity_percentage' => '27.13',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FC002G07530' => array(
'gene_id' => 'FC002G07530',
'e_value' => '2e-34',
'bit_score' => '139',
'alignment_length' => '495',
'identity_percentage' => '26.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'emh506330' => array(
'gene_id' => 'emh506330',
'e_value' => '1e-33',
'bit_score' => '137',
'alignment_length' => '527',
'identity_percentage' => '26.76',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G05750' => array(
'gene_id' => 'CV00G05750',
'e_value' => '2e-33',
'bit_score' => '137',
'alignment_length' => '522',
'identity_percentage' => '26.05',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CM01G00440' => array(
'gene_id' => 'CM01G00440',
'e_value' => '2e-32',
'bit_score' => '135',
'alignment_length' => '532',
'identity_percentage' => '26.13',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'ccr195660' => array(
'gene_id' => 'ccr195660',
'e_value' => '4e-32',
'bit_score' => '136',
'alignment_length' => '240',
'identity_percentage' => '32.50',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'ccr184840' => array(
'gene_id' => 'ccr184840',
'e_value' => '4e-31',
'bit_score' => '131',
'alignment_length' => '519',
'identity_percentage' => '25.24',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'VC00G55680' => array(
'gene_id' => 'VC00G55680',
'e_value' => '4e-31',
'bit_score' => '127',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CM08G02740' => array(
'gene_id' => 'CM08G02740',
'e_value' => '6e-31',
'bit_score' => '131',
'alignment_length' => '243',
'identity_percentage' => '34.16',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'VC00G55630' => array(
'gene_id' => 'VC00G55630',
'e_value' => '2e-30',
'bit_score' => '130',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR02G01400' => array(
'gene_id' => 'CR02G01400',
'e_value' => '2e-30',
'bit_score' => '129',
'alignment_length' => '268',
'identity_percentage' => '30.22',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'emh580190' => array(
'gene_id' => 'emh580190',
'e_value' => '2e-30',
'bit_score' => '127',
'alignment_length' => '485',
'identity_percentage' => '26.80',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G01230' => array(
'gene_id' => 'ATR_00038G01230',
'e_value' => '1e-29',
'bit_score' => '125',
'alignment_length' => '328',
'identity_percentage' => '28.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00750' => array(
'gene_id' => 'CM13G00750',
'e_value' => '3e-29',
'bit_score' => '127',
'alignment_length' => '236',
'identity_percentage' => '32.20',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'TP06G01280' => array(
'gene_id' => 'TP06G01280',
'e_value' => '1e-28',
'bit_score' => '122',
'alignment_length' => '437',
'identity_percentage' => '26.77',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'OT_15G01070' => array(
'gene_id' => 'OT_15G01070',
'e_value' => '4e-28',
'bit_score' => '123',
'alignment_length' => '497',
'identity_percentage' => '25.96',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G04390' => array(
'gene_id' => 'PTI_05G04390',
'e_value' => '8e-28',
'bit_score' => '121',
'alignment_length' => '295',
'identity_percentage' => '32.20',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'MP05G02150' => array(
'gene_id' => 'MP05G02150',
'e_value' => '9e-28',
'bit_score' => '122',
'alignment_length' => '551',
'identity_percentage' => '25.23',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'CM17G04540' => array(
'gene_id' => 'CM17G04540',
'e_value' => '1e-27',
'bit_score' => '122',
'alignment_length' => '199',
'identity_percentage' => '33.67',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G52620' => array(
'gene_id' => 'AP00G52620',
'e_value' => '3e-27',
'bit_score' => '119',
'alignment_length' => '266',
'identity_percentage' => '30.45',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G04600' => array(
'gene_id' => 'MRCC299_08G04600',
'e_value' => '7e-27',
'bit_score' => '117',
'alignment_length' => '229',
'identity_percentage' => '32.75',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00025G01980' => array(
'gene_id' => 'ATR_00025G01980',
'e_value' => '1e-26',
'bit_score' => '117',
'alignment_length' => '476',
'identity_percentage' => '25.00',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CV00G20060' => array(
'gene_id' => 'CV00G20060',
'e_value' => '1e-26',
'bit_score' => '118',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.03g09720' => array(
'gene_id' => 'RCC4223.03g09720',
'e_value' => '3e-26',
'bit_score' => '116',
'alignment_length' => '492',
'identity_percentage' => '24.59',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87370' => array(
'gene_id' => 'CV00G87370',
'e_value' => '2e-24',
'bit_score' => '109',
'alignment_length' => '318',
'identity_percentage' => '29.87',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00170' => array(
'gene_id' => 'FC006G00170',
'e_value' => '4e-24',
'bit_score' => '102',
'alignment_length' => '91',
'identity_percentage' => '52.75',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03300' => array(
'gene_id' => 'PTI_09G03300',
'e_value' => '1e-23',
'bit_score' => '109',
'alignment_length' => '537',
'identity_percentage' => '22.91',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_07G02380' => array(
'gene_id' => 'MRCC299_07G02380',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '513',
'identity_percentage' => '25.73',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh604690' => array(
'gene_id' => 'emh604690',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AA0003G01490' => array(
'gene_id' => 'AA0003G01490',
'e_value' => '4e-23',
'bit_score' => '100',
'alignment_length' => '129',
'identity_percentage' => '41.09',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'gsu87130' => array(
'gene_id' => 'gsu87130',
'e_value' => '6e-23',
'bit_score' => '105',
'alignment_length' => '316',
'identity_percentage' => '30.06',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G49240' => array(
'gene_id' => 'CV00G49240',
'e_value' => '6e-23',
'bit_score' => '106',
'alignment_length' => '518',
'identity_percentage' => '25.10',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CM04G01210' => array(
'gene_id' => 'CM04G01210',
'e_value' => '2e-22',
'bit_score' => '103',
'alignment_length' => '334',
'identity_percentage' => '27.84',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu126640' => array(
'gene_id' => 'gsu126640',
'e_value' => '3e-22',
'bit_score' => '105',
'alignment_length' => '564',
'identity_percentage' => '23.23',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'FC001G10930' => array(
'gene_id' => 'FC001G10930',
'e_value' => '3e-22',
'bit_score' => '102',
'alignment_length' => '239',
'identity_percentage' => '29.29',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_06G00880' => array(
'gene_id' => 'PTI_06G00880',
'e_value' => '4e-22',
'bit_score' => '104',
'alignment_length' => '369',
'identity_percentage' => '27.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'OL14G01630' => array(
'gene_id' => 'OL14G01630',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL14G00970' => array(
'gene_id' => 'OL14G00970',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g03580' => array(
'gene_id' => 'RCC4223.05g03580',
'e_value' => '9e-22',
'bit_score' => '102',
'alignment_length' => '322',
'identity_percentage' => '30.12',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PI00G28390' => array(
'gene_id' => 'PI00G28390',
'e_value' => '6e-21',
'bit_score' => '100',
'alignment_length' => '498',
'identity_percentage' => '24.70',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'MP04G04070' => array(
'gene_id' => 'MP04G04070',
'e_value' => '8e-21',
'bit_score' => '100',
'alignment_length' => '545',
'identity_percentage' => '24.77',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ccr74060' => array(
'gene_id' => 'ccr74060',
'e_value' => '2e-19',
'bit_score' => '96.7',
'alignment_length' => '218',
'identity_percentage' => '28.90',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00039G02190' => array(
'gene_id' => 'ATR_00039G02190',
'e_value' => '2e-19',
'bit_score' => '95.1',
'alignment_length' => '321',
'identity_percentage' => '29.28',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'TP07G04330' => array(
'gene_id' => 'TP07G04330',
'e_value' => '6e-19',
'bit_score' => '94.4',
'alignment_length' => '545',
'identity_percentage' => '22.57',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'TP03G06670' => array(
'gene_id' => 'TP03G06670',
'e_value' => '8e-19',
'bit_score' => '92.8',
'alignment_length' => '280',
'identity_percentage' => '26.43',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'PP00255G00220' => array(
'gene_id' => 'PP00255G00220',
'e_value' => '1e-18',
'bit_score' => '92.4',
'alignment_length' => '391',
'identity_percentage' => '25.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PI00G06020' => array(
'gene_id' => 'PI00G06020',
'e_value' => '1e-18',
'bit_score' => '92.0',
'alignment_length' => '323',
'identity_percentage' => '29.41',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'CR01G06680' => array(
'gene_id' => 'CR01G06680',
'e_value' => '2e-18',
'bit_score' => '93.2',
'alignment_length' => '292',
'identity_percentage' => '27.40',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OS03G22330' => array(
'gene_id' => 'OS03G22330',
'e_value' => '1e-17',
'bit_score' => '89.4',
'alignment_length' => '327',
'identity_percentage' => '27.83',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'YOR386W' => array(
'gene_id' => 'YOR386W',
'e_value' => '1e-17',
'bit_score' => '90.1',
'alignment_length' => '502',
'identity_percentage' => '23.31',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'OM_05G00230' => array(
'gene_id' => 'OM_05G00230',
'e_value' => '4e-17',
'bit_score' => '89.4',
'alignment_length' => '262',
'identity_percentage' => '28.24',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'AT2G47590' => array(
'gene_id' => 'AT2G47590',
'e_value' => '5e-17',
'bit_score' => '87.8',
'alignment_length' => '313',
'identity_percentage' => '28.43',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CR12G11270' => array(
'gene_id' => 'CR12G11270',
'e_value' => '6e-17',
'bit_score' => '87.8',
'alignment_length' => '307',
'identity_percentage' => '28.99',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00110' => array(
'gene_id' => 'PP00043G00110',
'e_value' => '2e-15',
'bit_score' => '83.2',
'alignment_length' => '364',
'identity_percentage' => '27.75',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_015G01850' => array(
'gene_id' => 'CNC64A_015G01850',
'e_value' => '6e-15',
'bit_score' => '82.0',
'alignment_length' => '283',
'identity_percentage' => '23.32',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'VC00G18140' => array(
'gene_id' => 'VC00G18140',
'e_value' => '3e-14',
'bit_score' => '79.7',
'alignment_length' => '188',
'identity_percentage' => '29.79',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'ccr46120' => array(
'gene_id' => 'ccr46120',
'e_value' => '4e-14',
'bit_score' => '78.6',
'alignment_length' => '325',
'identity_percentage' => '23.69',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'FC004G07480' => array(
'gene_id' => 'FC004G07480',
'e_value' => '1e-12',
'bit_score' => '74.7',
'alignment_length' => '256',
'identity_percentage' => '26.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'AA0019G00040' => array(
'gene_id' => 'AA0019G00040',
'e_value' => '2e-09',
'bit_score' => '59.3',
'alignment_length' => '72',
'identity_percentage' => '45.83',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'PP00002G01950' => array(
'gene_id' => 'PP00002G01950',
'e_value' => '1e-08',
'bit_score' => '61.6',
'alignment_length' => '76',
'identity_percentage' => '31.58',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_02137G00010' => array(
'gene_id' => 'ATR_02137G00010',
'e_value' => '1e-08',
'bit_score' => '58.9',
'alignment_length' => '165',
'identity_percentage' => '29.70',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_733G00010' => array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
[maximum depth reached]
)
),
'PTI_24G00100' => array(
'gene_id' => 'PTI_24G00100',
'e_value' => '2e-07',
'bit_score' => '58.2',
'alignment_length' => '188',
'identity_percentage' => '27.66',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP08G00290' => array(
'gene_id' => 'TP08G00290',
'e_value' => '2e-07',
'bit_score' => '57.4',
'alignment_length' => '163',
'identity_percentage' => '30.06',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'AA0014G00030' => array(
'gene_id' => 'AA0014G00030',
'e_value' => '4e-07',
'bit_score' => '54.3',
'alignment_length' => '108',
'identity_percentage' => '37.04',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G03840' => array(
'gene_id' => 'CNC64A_002G03840',
'e_value' => '1e-06',
'bit_score' => '54.7',
'alignment_length' => '296',
'identity_percentage' => '25.68',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT3G15620',
(int) 1 => 'AT1G04400',
(int) 2 => 'AT5G24850',
(int) 3 => 'AT4G08920',
(int) 4 => 'AT2G47590'
),
'atr' => array(
(int) 0 => 'ATR_00042G00260',
(int) 1 => 'ATR_00148G00690',
(int) 2 => 'ATR_00038G01230',
(int) 3 => 'ATR_00025G01980',
(int) 4 => 'ATR_00039G02190',
(int) 5 => 'ATR_02137G00010'
),
'osa' => array(
(int) 0 => 'OS02G10990',
(int) 1 => 'OS02G41550',
(int) 2 => 'OS06G45100',
(int) 3 => 'OS04G37920',
(int) 4 => 'OS02G36380',
(int) 5 => 'OS03G22330'
),
'ppa' => array(
(int) 0 => 'PP00012G00840',
(int) 1 => 'PP00002G01920',
(int) 2 => 'PP00488G00050',
(int) 3 => 'PP00255G00220',
(int) 4 => 'PP00043G00110',
(int) 5 => 'PP00002G01950'
),
'cvu' => array(
(int) 0 => 'CV00G06480',
(int) 1 => 'CV00G08260',
(int) 2 => 'CV00G05750',
(int) 3 => 'CV00G20060',
(int) 4 => 'CV00G87370',
(int) 5 => 'CV00G49240'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.10g00560',
(int) 1 => 'RCC4223.07g00760',
(int) 2 => 'RCC4223.08g01600',
(int) 3 => 'RCC4223.03g09720',
(int) 4 => 'RCC4223.05g03580'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_031G00590',
(int) 1 => 'CNC64A_008G02490',
(int) 2 => 'CNC64A_015G01850',
(int) 3 => 'CNC64A_002G03840'
),
'pse3' => array(
(int) 0 => 'PI00G34380',
(int) 1 => 'PI00G04790',
(int) 2 => 'PI00G51840',
(int) 3 => 'PI00G28390',
(int) 4 => 'PI00G06020'
),
'cre' => array(
(int) 0 => 'CR06G08080',
(int) 1 => 'CR06G12190',
(int) 2 => 'CR02G01400',
(int) 3 => 'CR01G06680',
(int) 4 => 'CR12G11270'
),
'acg' => array(
(int) 0 => 'AC00G14670',
(int) 1 => 'AC00G11930',
(int) 2 => 'AC00G22630'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_10G03120',
(int) 1 => 'MRCC299_10G00130',
(int) 2 => 'MRCC299_08G04600',
(int) 3 => 'MRCC299_07G02380'
),
'vca' => array(
(int) 0 => 'VC00G69290',
(int) 1 => 'VC00G59430',
(int) 2 => 'VC00G55680',
(int) 3 => 'VC00G55630',
(int) 4 => 'VC00G18140'
),
'ome' => array(
(int) 0 => 'OM_03G00330',
(int) 1 => 'OM_01G00240',
(int) 2 => 'OM_05G00230'
),
'ota' => array(
(int) 0 => 'OT_05G00290',
(int) 1 => 'OT_01G06510',
(int) 2 => 'OT_15G01070'
),
'mpu' => array(
(int) 0 => 'MP09G02830',
(int) 1 => 'MP13G00590',
(int) 2 => 'MP05G02150',
(int) 3 => 'MP04G04070'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000020038',
(int) 1 => 'ENSMUSG00000068742'
),
'hom' => array(
(int) 0 => 'ENSG00000008405'
),
'olu' => array(
(int) 0 => 'OL05G00260',
(int) 1 => 'OL01G06630',
(int) 2 => 'OL14G01630',
(int) 3 => 'OL14G00970'
),
'drm' => array(
(int) 0 => 'FBgn0016054',
(int) 1 => 'FBgn0025680'
),
'orcc809' => array(
(int) 0 => 'ORCC809_05G00280',
(int) 1 => 'ORCC809_01G00210'
),
'nga' => array(
(int) 0 => 'Naga_100161g13',
(int) 1 => 'Naga_100190g4'
),
'gsu' => array(
(int) 0 => 'gsu79870',
(int) 1 => 'gsu109050',
(int) 2 => 'gsu129520',
(int) 3 => 'gsu87130',
(int) 4 => 'gsu126640'
),
'cme' => array(
(int) 0 => 'CM15G03480',
(int) 1 => 'CM10G01320',
(int) 2 => 'CM01G00440',
(int) 3 => 'CM08G02740',
(int) 4 => 'CM13G00750',
(int) 5 => 'CM17G04540',
(int) 6 => 'CM04G01210'
),
'emh' => array(
(int) 0 => 'emh83630',
(int) 1 => 'emh539160',
(int) 2 => 'emh159140',
(int) 3 => 'emh547370',
(int) 4 => 'emh295050',
(int) 5 => 'emh506330',
(int) 6 => 'emh580190',
(int) 7 => 'emh604690'
),
'esi' => array(
(int) 0 => 'ES0194G00110',
(int) 1 => 'ES0002G00990',
(int) 2 => 'ES0002G02030'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_03G00300',
(int) 1 => 'BPRRCC1105_14G00970'
),
'ptri' => array(
(int) 0 => 'PTI_08G03200',
(int) 1 => 'PTI_05G04390',
(int) 2 => 'PTI_09G03300',
(int) 3 => 'PTI_06G00880',
(int) 4 => 'PTI_24G00100'
),
'ccr' => array(
(int) 0 => 'ccr31740',
(int) 1 => 'ccr195660',
(int) 2 => 'ccr184840',
(int) 3 => 'ccr74060',
(int) 4 => 'ccr46120'
),
'phs' => array(
(int) 0 => 'phs372210',
(int) 1 => 'phs349220',
(int) 2 => 'phs349300'
),
'aan' => array(
(int) 0 => 'AA0003G05580',
(int) 1 => 'AA0004G04420',
(int) 2 => 'AA0003G01490',
(int) 3 => 'AA0019G00040',
(int) 4 => 'AA0014G00030'
),
'fcy' => array(
(int) 0 => 'FC007G01830',
(int) 1 => 'FC002G07530',
(int) 2 => 'FC006G00170',
(int) 3 => 'FC001G10930',
(int) 4 => 'FC004G07480'
),
'tps' => array(
(int) 0 => 'TP06G00790',
(int) 1 => 'TP06G01280',
(int) 2 => 'TP07G04330',
(int) 3 => 'TP03G06670',
(int) 4 => 'TP08G00290'
),
'apr' => array(
(int) 0 => 'AP00G52620'
),
'sac' => array(
(int) 0 => 'YOR386W'
)
),
'gene_id' => 'AT3G15620',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT3G15620',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'SPAC1F7.10',
'gf_placeholder' => 'HOM03P005297',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT3G15620' => array(
'gene_id' => 'AT3G15620',
'e_value' => '0.0',
'bit_score' => '1158',
'alignment_length' => '557',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ATR_00042G00260' => array(
'gene_id' => 'ATR_00042G00260',
'e_value' => '0.0',
'bit_score' => '780',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OS02G10990' => array(
'gene_id' => 'OS02G10990',
'e_value' => '0.0',
'bit_score' => '731',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PP00012G00840' => array(
'gene_id' => 'PP00012G00840',
'e_value' => '0.0',
'bit_score' => '690',
'alignment_length' => '514',
'identity_percentage' => '62.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CV00G06480' => array(
'gene_id' => 'CV00G06480',
'e_value' => '0.0',
'bit_score' => '587',
'alignment_length' => '484',
'identity_percentage' => '57.02',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'RCC4223.10g00560' => array(
'gene_id' => 'RCC4223.10g00560',
'e_value' => '0.0',
'bit_score' => '569',
'alignment_length' => '525',
'identity_percentage' => '53.52',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CNC64A_031G00590' => array(
'gene_id' => 'CNC64A_031G00590',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '504',
'identity_percentage' => '55.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PI00G34380' => array(
'gene_id' => 'PI00G34380',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '534',
'identity_percentage' => '53.56',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CR06G08080' => array(
'gene_id' => 'CR06G08080',
'e_value' => '0.0',
'bit_score' => '567',
'alignment_length' => '504',
'identity_percentage' => '53.77',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'AC00G14670' => array(
'gene_id' => 'AC00G14670',
'e_value' => '0.0',
'bit_score' => '558',
'alignment_length' => '505',
'identity_percentage' => '54.46',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'MRCC299_10G03120' => array(
'gene_id' => 'MRCC299_10G03120',
'e_value' => '0.0',
'bit_score' => '541',
'alignment_length' => '552',
'identity_percentage' => '49.09',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'VC00G69290' => array(
'gene_id' => 'VC00G69290',
'e_value' => '0.0',
'bit_score' => '540',
'alignment_length' => '503',
'identity_percentage' => '52.49',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OM_03G00330' => array(
'gene_id' => 'OM_03G00330',
'e_value' => '0.0',
'bit_score' => '530',
'alignment_length' => '556',
'identity_percentage' => '47.84',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OT_05G00290' => array(
'gene_id' => 'OT_05G00290',
'e_value' => '3e-179',
'bit_score' => '525',
'alignment_length' => '553',
'identity_percentage' => '47.02',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'MP09G02830' => array(
'gene_id' => 'MP09G02830',
'e_value' => '3e-177',
'bit_score' => '519',
'alignment_length' => '552',
'identity_percentage' => '49.64',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSMUSG00000020038' => array(
'gene_id' => 'ENSMUSG00000020038',
'e_value' => '6e-175',
'bit_score' => '515',
'alignment_length' => '501',
'identity_percentage' => '50.30',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSG00000008405' => array(
'gene_id' => 'ENSG00000008405',
'e_value' => '7e-175',
'bit_score' => '514',
'alignment_length' => '501',
'identity_percentage' => '50.50',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSMUSG00000068742' => array(
'gene_id' => 'ENSMUSG00000068742',
'e_value' => '1e-171',
'bit_score' => '506',
'alignment_length' => '502',
'identity_percentage' => '50.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OL05G00260' => array(
'gene_id' => 'OL05G00260',
'e_value' => '1e-170',
'bit_score' => '503',
'alignment_length' => '545',
'identity_percentage' => '46.42',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'FBgn0016054' => array(
'gene_id' => 'FBgn0016054',
'e_value' => '5e-168',
'bit_score' => '495',
'alignment_length' => '515',
'identity_percentage' => '47.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ORCC809_05G00280' => array(
'gene_id' => 'ORCC809_05G00280',
'e_value' => '9e-167',
'bit_score' => '523',
'alignment_length' => '557',
'identity_percentage' => '46.32',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'Naga_100161g13' => array(
'gene_id' => 'Naga_100161g13',
'e_value' => '5e-166',
'bit_score' => '492',
'alignment_length' => '533',
'identity_percentage' => '47.28',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'gsu79870' => array(
'gene_id' => 'gsu79870',
'e_value' => '2e-161',
'bit_score' => '479',
'alignment_length' => '517',
'identity_percentage' => '45.45',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CM15G03480' => array(
'gene_id' => 'CM15G03480',
'e_value' => '4e-160',
'bit_score' => '474',
'alignment_length' => '524',
'identity_percentage' => '46.37',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh83630' => array(
'gene_id' => 'emh83630',
'e_value' => '4e-158',
'bit_score' => '468',
'alignment_length' => '488',
'identity_percentage' => '47.95',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh539160' => array(
'gene_id' => 'emh539160',
'e_value' => '2e-155',
'bit_score' => '466',
'alignment_length' => '487',
'identity_percentage' => '47.84',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ES0194G00110' => array(
'gene_id' => 'ES0194G00110',
'e_value' => '9e-155',
'bit_score' => '461',
'alignment_length' => '501',
'identity_percentage' => '49.50',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'BPRRCC1105_03G00300' => array(
'gene_id' => 'BPRRCC1105_03G00300',
'e_value' => '9e-145',
'bit_score' => '437',
'alignment_length' => '580',
'identity_percentage' => '42.93',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PTI_08G03200' => array(
'gene_id' => 'PTI_08G03200',
'e_value' => '4e-139',
'bit_score' => '422',
'alignment_length' => '520',
'identity_percentage' => '44.04',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ccr31740' => array(
'gene_id' => 'ccr31740',
'e_value' => '8e-129',
'bit_score' => '395',
'alignment_length' => '521',
'identity_percentage' => '41.65',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs372210' => array(
'gene_id' => 'phs372210',
'e_value' => '7e-128',
'bit_score' => '391',
'alignment_length' => '546',
'identity_percentage' => '39.01',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs349220' => array(
'gene_id' => 'phs349220',
'e_value' => '5e-123',
'bit_score' => '378',
'alignment_length' => '523',
'identity_percentage' => '40.54',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs349300' => array(
'gene_id' => 'phs349300',
'e_value' => '1e-114',
'bit_score' => '363',
'alignment_length' => '559',
'identity_percentage' => '37.57',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'FBgn0025680' => array(
'gene_id' => 'FBgn0025680',
'e_value' => '1e-105',
'bit_score' => '335',
'alignment_length' => '533',
'identity_percentage' => '35.27',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P123142'
)
),
'AA0003G05580' => array(
'gene_id' => 'AA0003G05580',
'e_value' => '8e-92',
'bit_score' => '298',
'alignment_length' => '519',
'identity_percentage' => '37.96',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh159140' => array(
'gene_id' => 'emh159140',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P050945'
)
),
'emh547370' => array(
'gene_id' => 'emh547370',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P050945'
)
),
'RCC4223.07g00760' => array(
'gene_id' => 'RCC4223.07g00760',
'e_value' => '2e-52',
'bit_score' => '194',
'alignment_length' => '494',
'identity_percentage' => '30.16',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PI00G04790' => array(
'gene_id' => 'PI00G04790',
'e_value' => '5e-52',
'bit_score' => '193',
'alignment_length' => '494',
'identity_percentage' => '29.76',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS02G41550' => array(
'gene_id' => 'OS02G41550',
'e_value' => '6e-51',
'bit_score' => '190',
'alignment_length' => '548',
'identity_percentage' => '29.38',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MP13G00590' => array(
'gene_id' => 'MP13G00590',
'e_value' => '5e-50',
'bit_score' => '186',
'alignment_length' => '515',
'identity_percentage' => '29.71',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT1G04400' => array(
'gene_id' => 'AT1G04400',
'e_value' => '7e-50',
'bit_score' => '186',
'alignment_length' => '505',
'identity_percentage' => '30.69',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00148G00690' => array(
'gene_id' => 'ATR_00148G00690',
'e_value' => '1e-49',
'bit_score' => '186',
'alignment_length' => '542',
'identity_percentage' => '29.52',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'AC00G11930' => array(
'gene_id' => 'AC00G11930',
'e_value' => '7e-49',
'bit_score' => '182',
'alignment_length' => '485',
'identity_percentage' => '28.04',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OM_01G00240' => array(
'gene_id' => 'OM_01G00240',
'e_value' => '3e-47',
'bit_score' => '178',
'alignment_length' => '513',
'identity_percentage' => '30.02',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'PP00002G01920' => array(
'gene_id' => 'PP00002G01920',
'e_value' => '5e-47',
'bit_score' => '179',
'alignment_length' => '512',
'identity_percentage' => '27.73',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'FC007G01830' => array(
'gene_id' => 'FC007G01830',
'e_value' => '9e-47',
'bit_score' => '177',
'alignment_length' => '507',
'identity_percentage' => '29.98',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT5G24850' => array(
'gene_id' => 'AT5G24850',
'e_value' => '7e-46',
'bit_score' => '174',
'alignment_length' => '462',
'identity_percentage' => '29.44',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'PI00G51840' => array(
'gene_id' => 'PI00G51840',
'e_value' => '1e-45',
'bit_score' => '173',
'alignment_length' => '539',
'identity_percentage' => '28.94',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'VC00G59430' => array(
'gene_id' => 'VC00G59430',
'e_value' => '2e-45',
'bit_score' => '176',
'alignment_length' => '489',
'identity_percentage' => '28.02',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MRCC299_10G00130' => array(
'gene_id' => 'MRCC299_10G00130',
'e_value' => '4e-44',
'bit_score' => '168',
'alignment_length' => '510',
'identity_percentage' => '29.02',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'gsu109050' => array(
'gene_id' => 'gsu109050',
'e_value' => '5e-44',
'bit_score' => '172',
'alignment_length' => '517',
'identity_percentage' => '28.05',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS06G45100' => array(
'gene_id' => 'OS06G45100',
'e_value' => '7e-44',
'bit_score' => '169',
'alignment_length' => '468',
'identity_percentage' => '29.91',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'RCC4223.08g01600' => array(
'gene_id' => 'RCC4223.08g01600',
'e_value' => '7e-43',
'bit_score' => '166',
'alignment_length' => '530',
'identity_percentage' => '29.43',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ES0002G00990' => array(
'gene_id' => 'ES0002G00990',
'e_value' => '2e-42',
'bit_score' => '164',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OS04G37920' => array(
'gene_id' => 'OS04G37920',
'e_value' => '2e-42',
'bit_score' => '165',
'alignment_length' => '530',
'identity_percentage' => '29.06',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PP00488G00050' => array(
'gene_id' => 'PP00488G00050',
'e_value' => '3e-42',
'bit_score' => '164',
'alignment_length' => '498',
'identity_percentage' => '28.11',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CR06G12190' => array(
'gene_id' => 'CR06G12190',
'e_value' => '1e-41',
'bit_score' => '165',
'alignment_length' => '498',
'identity_percentage' => '27.11',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS02G36380' => array(
'gene_id' => 'OS02G36380',
'e_value' => '4e-41',
'bit_score' => '162',
'alignment_length' => '546',
'identity_percentage' => '28.94',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CNC64A_008G02490' => array(
'gene_id' => 'CNC64A_008G02490',
'e_value' => '6e-41',
'bit_score' => '163',
'alignment_length' => '518',
'identity_percentage' => '28.76',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P001769',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ES0002G02030' => array(
'gene_id' => 'ES0002G02030',
'e_value' => '2e-40',
'bit_score' => '158',
'alignment_length' => '508',
'identity_percentage' => '28.74',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AA0004G04420' => array(
'gene_id' => 'AA0004G04420',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '463',
'identity_percentage' => '27.43',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G08260' => array(
'gene_id' => 'CV00G08260',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '492',
'identity_percentage' => '27.24',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ORCC809_01G00210' => array(
'gene_id' => 'ORCC809_01G00210',
'e_value' => '9e-39',
'bit_score' => '155',
'alignment_length' => '515',
'identity_percentage' => '27.77',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AC00G22630' => array(
'gene_id' => 'AC00G22630',
'e_value' => '1e-38',
'bit_score' => '153',
'alignment_length' => '537',
'identity_percentage' => '26.07',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'TP06G00790' => array(
'gene_id' => 'TP06G00790',
'e_value' => '4e-38',
'bit_score' => '151',
'alignment_length' => '522',
'identity_percentage' => '28.54',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT4G08920' => array(
'gene_id' => 'AT4G08920',
'e_value' => '4e-38',
'bit_score' => '152',
'alignment_length' => '528',
'identity_percentage' => '27.84',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'emh295050' => array(
'gene_id' => 'emh295050',
'e_value' => '5e-38',
'bit_score' => '150',
'alignment_length' => '498',
'identity_percentage' => '27.31',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OT_01G06510' => array(
'gene_id' => 'OT_01G06510',
'e_value' => '5e-37',
'bit_score' => '148',
'alignment_length' => '517',
'identity_percentage' => '28.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'Naga_100190g4' => array(
'gene_id' => 'Naga_100190g4',
'e_value' => '5e-37',
'bit_score' => '149',
'alignment_length' => '510',
'identity_percentage' => '27.06',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'gsu129520' => array(
'gene_id' => 'gsu129520',
'e_value' => '8e-37',
'bit_score' => '147',
'alignment_length' => '525',
'identity_percentage' => '26.29',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM10G01320' => array(
'gene_id' => 'CM10G01320',
'e_value' => '1e-36',
'bit_score' => '148',
'alignment_length' => '544',
'identity_percentage' => '27.39',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'BPRRCC1105_14G00970' => array(
'gene_id' => 'BPRRCC1105_14G00970',
'e_value' => '1e-36',
'bit_score' => '147',
'alignment_length' => '500',
'identity_percentage' => '30.20',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OL01G06630' => array(
'gene_id' => 'OL01G06630',
'e_value' => '3e-36',
'bit_score' => '145',
'alignment_length' => '516',
'identity_percentage' => '27.13',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'FC002G07530' => array(
'gene_id' => 'FC002G07530',
'e_value' => '2e-34',
'bit_score' => '139',
'alignment_length' => '495',
'identity_percentage' => '26.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'emh506330' => array(
'gene_id' => 'emh506330',
'e_value' => '1e-33',
'bit_score' => '137',
'alignment_length' => '527',
'identity_percentage' => '26.76',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G05750' => array(
'gene_id' => 'CV00G05750',
'e_value' => '2e-33',
'bit_score' => '137',
'alignment_length' => '522',
'identity_percentage' => '26.05',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM01G00440' => array(
'gene_id' => 'CM01G00440',
'e_value' => '2e-32',
'bit_score' => '135',
'alignment_length' => '532',
'identity_percentage' => '26.13',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ccr195660' => array(
'gene_id' => 'ccr195660',
'e_value' => '4e-32',
'bit_score' => '136',
'alignment_length' => '240',
'identity_percentage' => '32.50',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ccr184840' => array(
'gene_id' => 'ccr184840',
'e_value' => '4e-31',
'bit_score' => '131',
'alignment_length' => '519',
'identity_percentage' => '25.24',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'VC00G55680' => array(
'gene_id' => 'VC00G55680',
'e_value' => '4e-31',
'bit_score' => '127',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM08G02740' => array(
'gene_id' => 'CM08G02740',
'e_value' => '6e-31',
'bit_score' => '131',
'alignment_length' => '243',
'identity_percentage' => '34.16',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'VC00G55630' => array(
'gene_id' => 'VC00G55630',
'e_value' => '2e-30',
'bit_score' => '130',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CR02G01400' => array(
'gene_id' => 'CR02G01400',
'e_value' => '2e-30',
'bit_score' => '129',
'alignment_length' => '268',
'identity_percentage' => '30.22',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'emh580190' => array(
'gene_id' => 'emh580190',
'e_value' => '2e-30',
'bit_score' => '127',
'alignment_length' => '485',
'identity_percentage' => '26.80',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ATR_00038G01230' => array(
'gene_id' => 'ATR_00038G01230',
'e_value' => '1e-29',
'bit_score' => '125',
'alignment_length' => '328',
'identity_percentage' => '28.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CM13G00750' => array(
'gene_id' => 'CM13G00750',
'e_value' => '3e-29',
'bit_score' => '127',
'alignment_length' => '236',
'identity_percentage' => '32.20',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'TP06G01280' => array(
'gene_id' => 'TP06G01280',
'e_value' => '1e-28',
'bit_score' => '122',
'alignment_length' => '437',
'identity_percentage' => '26.77',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OT_15G01070' => array(
'gene_id' => 'OT_15G01070',
'e_value' => '4e-28',
'bit_score' => '123',
'alignment_length' => '497',
'identity_percentage' => '25.96',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'PTI_05G04390' => array(
'gene_id' => 'PTI_05G04390',
'e_value' => '8e-28',
'bit_score' => '121',
'alignment_length' => '295',
'identity_percentage' => '32.20',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'MP05G02150' => array(
'gene_id' => 'MP05G02150',
'e_value' => '9e-28',
'bit_score' => '122',
'alignment_length' => '551',
'identity_percentage' => '25.23',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CM17G04540' => array(
'gene_id' => 'CM17G04540',
'e_value' => '1e-27',
'bit_score' => '122',
'alignment_length' => '199',
'identity_percentage' => '33.67',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'AP00G52620' => array(
'gene_id' => 'AP00G52620',
'e_value' => '3e-27',
'bit_score' => '119',
'alignment_length' => '266',
'identity_percentage' => '30.45',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MRCC299_08G04600' => array(
'gene_id' => 'MRCC299_08G04600',
'e_value' => '7e-27',
'bit_score' => '117',
'alignment_length' => '229',
'identity_percentage' => '32.75',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00025G01980' => array(
'gene_id' => 'ATR_00025G01980',
'e_value' => '1e-26',
'bit_score' => '117',
'alignment_length' => '476',
'identity_percentage' => '25.00',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G20060' => array(
'gene_id' => 'CV00G20060',
'e_value' => '1e-26',
'bit_score' => '118',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'RCC4223.03g09720' => array(
'gene_id' => 'RCC4223.03g09720',
'e_value' => '3e-26',
'bit_score' => '116',
'alignment_length' => '492',
'identity_percentage' => '24.59',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068139'
)
),
'CV00G87370' => array(
'gene_id' => 'CV00G87370',
'e_value' => '2e-24',
'bit_score' => '109',
'alignment_length' => '318',
'identity_percentage' => '29.87',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'FC006G00170' => array(
'gene_id' => 'FC006G00170',
'e_value' => '4e-24',
'bit_score' => '102',
'alignment_length' => '91',
'identity_percentage' => '52.75',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P118804'
)
),
'PTI_09G03300' => array(
'gene_id' => 'PTI_09G03300',
'e_value' => '1e-23',
'bit_score' => '109',
'alignment_length' => '537',
'identity_percentage' => '22.91',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068029'
)
),
'MRCC299_07G02380' => array(
'gene_id' => 'MRCC299_07G02380',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '513',
'identity_percentage' => '25.73',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'emh604690' => array(
'gene_id' => 'emh604690',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'AA0003G01490' => array(
'gene_id' => 'AA0003G01490',
'e_value' => '4e-23',
'bit_score' => '100',
'alignment_length' => '129',
'identity_percentage' => '41.09',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'gsu87130' => array(
'gene_id' => 'gsu87130',
'e_value' => '6e-23',
'bit_score' => '105',
'alignment_length' => '316',
'identity_percentage' => '30.06',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CV00G49240' => array(
'gene_id' => 'CV00G49240',
'e_value' => '6e-23',
'bit_score' => '106',
'alignment_length' => '518',
'identity_percentage' => '25.10',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P180839'
)
),
'CM04G01210' => array(
'gene_id' => 'CM04G01210',
'e_value' => '2e-22',
'bit_score' => '103',
'alignment_length' => '334',
'identity_percentage' => '27.84',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'gsu126640' => array(
'gene_id' => 'gsu126640',
'e_value' => '3e-22',
'bit_score' => '105',
'alignment_length' => '564',
'identity_percentage' => '23.23',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P160378'
)
),
'FC001G10930' => array(
'gene_id' => 'FC001G10930',
'e_value' => '3e-22',
'bit_score' => '102',
'alignment_length' => '239',
'identity_percentage' => '29.29',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'PTI_06G00880' => array(
'gene_id' => 'PTI_06G00880',
'e_value' => '4e-22',
'bit_score' => '104',
'alignment_length' => '369',
'identity_percentage' => '27.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'OL14G01630' => array(
'gene_id' => 'OL14G01630',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'OL14G00970' => array(
'gene_id' => 'OL14G00970',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'RCC4223.05g03580' => array(
'gene_id' => 'RCC4223.05g03580',
'e_value' => '9e-22',
'bit_score' => '102',
'alignment_length' => '322',
'identity_percentage' => '30.12',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PI00G28390' => array(
'gene_id' => 'PI00G28390',
'e_value' => '6e-21',
'bit_score' => '100',
'alignment_length' => '498',
'identity_percentage' => '24.70',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068139'
)
),
'MP04G04070' => array(
'gene_id' => 'MP04G04070',
'e_value' => '8e-21',
'bit_score' => '100',
'alignment_length' => '545',
'identity_percentage' => '24.77',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'ccr74060' => array(
'gene_id' => 'ccr74060',
'e_value' => '2e-19',
'bit_score' => '96.7',
'alignment_length' => '218',
'identity_percentage' => '28.90',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00039G02190' => array(
'gene_id' => 'ATR_00039G02190',
'e_value' => '2e-19',
'bit_score' => '95.1',
'alignment_length' => '321',
'identity_percentage' => '29.28',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'TP07G04330' => array(
'gene_id' => 'TP07G04330',
'e_value' => '6e-19',
'bit_score' => '94.4',
'alignment_length' => '545',
'identity_percentage' => '22.57',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'TP03G06670' => array(
'gene_id' => 'TP03G06670',
'e_value' => '8e-19',
'bit_score' => '92.8',
'alignment_length' => '280',
'identity_percentage' => '26.43',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068029'
)
),
'PP00255G00220' => array(
'gene_id' => 'PP00255G00220',
'e_value' => '1e-18',
'bit_score' => '92.4',
'alignment_length' => '391',
'identity_percentage' => '25.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PI00G06020' => array(
'gene_id' => 'PI00G06020',
'e_value' => '1e-18',
'bit_score' => '92.0',
'alignment_length' => '323',
'identity_percentage' => '29.41',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CR01G06680' => array(
'gene_id' => 'CR01G06680',
'e_value' => '2e-18',
'bit_score' => '93.2',
'alignment_length' => '292',
'identity_percentage' => '27.40',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P074290'
)
),
'OS03G22330' => array(
'gene_id' => 'OS03G22330',
'e_value' => '1e-17',
'bit_score' => '89.4',
'alignment_length' => '327',
'identity_percentage' => '27.83',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'YOR386W' => array(
'gene_id' => 'YOR386W',
'e_value' => '1e-17',
'bit_score' => '90.1',
'alignment_length' => '502',
'identity_percentage' => '23.31',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OM_05G00230' => array(
'gene_id' => 'OM_05G00230',
'e_value' => '4e-17',
'bit_score' => '89.4',
'alignment_length' => '262',
'identity_percentage' => '28.24',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'AT2G47590' => array(
'gene_id' => 'AT2G47590',
'e_value' => '5e-17',
'bit_score' => '87.8',
'alignment_length' => '313',
'identity_percentage' => '28.43',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CR12G11270' => array(
'gene_id' => 'CR12G11270',
'e_value' => '6e-17',
'bit_score' => '87.8',
'alignment_length' => '307',
'identity_percentage' => '28.99',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PP00043G00110' => array(
'gene_id' => 'PP00043G00110',
'e_value' => '2e-15',
'bit_score' => '83.2',
'alignment_length' => '364',
'identity_percentage' => '27.75',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CNC64A_015G01850' => array(
'gene_id' => 'CNC64A_015G01850',
'e_value' => '6e-15',
'bit_score' => '82.0',
'alignment_length' => '283',
'identity_percentage' => '23.32',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P119728'
)
),
'VC00G18140' => array(
'gene_id' => 'VC00G18140',
'e_value' => '3e-14',
'bit_score' => '79.7',
'alignment_length' => '188',
'identity_percentage' => '29.79',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P074290'
)
),
'ccr46120' => array(
'gene_id' => 'ccr46120',
'e_value' => '4e-14',
'bit_score' => '78.6',
'alignment_length' => '325',
'identity_percentage' => '23.69',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'FC004G07480' => array(
'gene_id' => 'FC004G07480',
'e_value' => '1e-12',
'bit_score' => '74.7',
'alignment_length' => '256',
'identity_percentage' => '26.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'AA0019G00040' => array(
'gene_id' => 'AA0019G00040',
'e_value' => '2e-09',
'bit_score' => '59.3',
'alignment_length' => '72',
'identity_percentage' => '45.83',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P211836'
)
),
'PP00002G01950' => array(
'gene_id' => 'PP00002G01950',
'e_value' => '1e-08',
'bit_score' => '61.6',
'alignment_length' => '76',
'identity_percentage' => '31.58',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_02137G00010' => array(
'gene_id' => 'ATR_02137G00010',
'e_value' => '1e-08',
'bit_score' => '58.9',
'alignment_length' => '165',
'identity_percentage' => '29.70',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P085436'
)
),
'CNC64A_733G00010' => array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PTI_24G00100' => array(
'gene_id' => 'PTI_24G00100',
'e_value' => '2e-07',
'bit_score' => '58.2',
'alignment_length' => '188',
'identity_percentage' => '27.66',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'TP08G00290' => array(
'gene_id' => 'TP08G00290',
'e_value' => '2e-07',
'bit_score' => '57.4',
'alignment_length' => '163',
'identity_percentage' => '30.06',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'AA0014G00030' => array(
'gene_id' => 'AA0014G00030',
'e_value' => '4e-07',
'bit_score' => '54.3',
'alignment_length' => '108',
'identity_percentage' => '37.04',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'CNC64A_002G03840' => array(
'gene_id' => 'CNC64A_002G03840',
'e_value' => '1e-06',
'bit_score' => '54.7',
'alignment_length' => '296',
'identity_percentage' => '25.68',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT3G15620',
(int) 1 => 'AT1G04400',
(int) 2 => 'AT5G24850',
(int) 3 => 'AT4G08920',
(int) 4 => 'AT2G47590'
),
'atr' => array(
(int) 0 => 'ATR_00042G00260',
(int) 1 => 'ATR_00148G00690',
(int) 2 => 'ATR_00038G01230',
(int) 3 => 'ATR_00025G01980',
(int) 4 => 'ATR_00039G02190',
(int) 5 => 'ATR_02137G00010'
),
'osa' => array(
(int) 0 => 'OS02G10990',
(int) 1 => 'OS02G41550',
(int) 2 => 'OS06G45100',
(int) 3 => 'OS04G37920',
(int) 4 => 'OS02G36380',
(int) 5 => 'OS03G22330'
),
'ppa' => array(
(int) 0 => 'PP00012G00840',
(int) 1 => 'PP00002G01920',
(int) 2 => 'PP00488G00050',
(int) 3 => 'PP00255G00220',
(int) 4 => 'PP00043G00110',
(int) 5 => 'PP00002G01950'
),
'cvu' => array(
(int) 0 => 'CV00G06480',
(int) 1 => 'CV00G08260',
(int) 2 => 'CV00G05750',
(int) 3 => 'CV00G20060',
(int) 4 => 'CV00G87370',
(int) 5 => 'CV00G49240'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.10g00560',
(int) 1 => 'RCC4223.07g00760',
(int) 2 => 'RCC4223.08g01600',
(int) 3 => 'RCC4223.03g09720',
(int) 4 => 'RCC4223.05g03580'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_031G00590',
(int) 1 => 'CNC64A_008G02490',
(int) 2 => 'CNC64A_015G01850',
(int) 3 => 'CNC64A_002G03840'
),
'pse3' => array(
(int) 0 => 'PI00G34380',
(int) 1 => 'PI00G04790',
(int) 2 => 'PI00G51840',
(int) 3 => 'PI00G28390',
(int) 4 => 'PI00G06020'
),
'cre' => array(
(int) 0 => 'CR06G08080',
(int) 1 => 'CR06G12190',
(int) 2 => 'CR02G01400',
(int) 3 => 'CR01G06680',
(int) 4 => 'CR12G11270'
),
'acg' => array(
(int) 0 => 'AC00G14670',
(int) 1 => 'AC00G11930',
(int) 2 => 'AC00G22630'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_10G03120',
(int) 1 => 'MRCC299_10G00130',
(int) 2 => 'MRCC299_08G04600',
(int) 3 => 'MRCC299_07G02380'
),
'vca' => array(
(int) 0 => 'VC00G69290',
(int) 1 => 'VC00G59430',
(int) 2 => 'VC00G55680',
(int) 3 => 'VC00G55630',
(int) 4 => 'VC00G18140'
),
'ome' => array(
(int) 0 => 'OM_03G00330',
(int) 1 => 'OM_01G00240',
(int) 2 => 'OM_05G00230'
),
'ota' => array(
(int) 0 => 'OT_05G00290',
(int) 1 => 'OT_01G06510',
(int) 2 => 'OT_15G01070'
),
'mpu' => array(
(int) 0 => 'MP09G02830',
(int) 1 => 'MP13G00590',
(int) 2 => 'MP05G02150',
(int) 3 => 'MP04G04070'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000020038',
(int) 1 => 'ENSMUSG00000068742'
),
'hom' => array(
(int) 0 => 'ENSG00000008405'
),
'olu' => array(
(int) 0 => 'OL05G00260',
(int) 1 => 'OL01G06630',
(int) 2 => 'OL14G01630',
(int) 3 => 'OL14G00970'
),
'drm' => array(
(int) 0 => 'FBgn0016054',
(int) 1 => 'FBgn0025680'
),
'orcc809' => array(
(int) 0 => 'ORCC809_05G00280',
(int) 1 => 'ORCC809_01G00210'
),
'nga' => array(
(int) 0 => 'Naga_100161g13',
(int) 1 => 'Naga_100190g4'
),
'gsu' => array(
(int) 0 => 'gsu79870',
(int) 1 => 'gsu109050',
(int) 2 => 'gsu129520',
(int) 3 => 'gsu87130',
(int) 4 => 'gsu126640'
),
'cme' => array(
(int) 0 => 'CM15G03480',
(int) 1 => 'CM10G01320',
(int) 2 => 'CM01G00440',
(int) 3 => 'CM08G02740',
(int) 4 => 'CM13G00750',
(int) 5 => 'CM17G04540',
(int) 6 => 'CM04G01210'
),
'emh' => array(
(int) 0 => 'emh83630',
(int) 1 => 'emh539160',
(int) 2 => 'emh159140',
(int) 3 => 'emh547370',
(int) 4 => 'emh295050',
(int) 5 => 'emh506330',
(int) 6 => 'emh580190',
(int) 7 => 'emh604690'
),
'esi' => array(
(int) 0 => 'ES0194G00110',
(int) 1 => 'ES0002G00990',
(int) 2 => 'ES0002G02030'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_03G00300',
(int) 1 => 'BPRRCC1105_14G00970'
),
'ptri' => array(
(int) 0 => 'PTI_08G03200',
(int) 1 => 'PTI_05G04390',
(int) 2 => 'PTI_09G03300',
(int) 3 => 'PTI_06G00880',
(int) 4 => 'PTI_24G00100'
),
'ccr' => array(
(int) 0 => 'ccr31740',
(int) 1 => 'ccr195660',
(int) 2 => 'ccr184840',
(int) 3 => 'ccr74060',
(int) 4 => 'ccr46120'
),
'phs' => array(
(int) 0 => 'phs372210',
(int) 1 => 'phs349220',
(int) 2 => 'phs349300'
),
'aan' => array(
(int) 0 => 'AA0003G05580',
(int) 1 => 'AA0004G04420',
(int) 2 => 'AA0003G01490',
(int) 3 => 'AA0019G00040',
(int) 4 => 'AA0014G00030'
),
'fcy' => array(
(int) 0 => 'FC007G01830',
(int) 1 => 'FC002G07530',
(int) 2 => 'FC006G00170',
(int) 3 => 'FC001G10930',
(int) 4 => 'FC004G07480'
),
'tps' => array(
(int) 0 => 'TP06G00790',
(int) 1 => 'TP06G01280',
(int) 2 => 'TP07G04330',
(int) 3 => 'TP03G06670',
(int) 4 => 'TP08G00290'
),
'apr' => array(
(int) 0 => 'AP00G52620'
),
'sac' => array(
(int) 0 => 'YOR386W'
)
)
$gene_id = 'AT3G15620'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT3G15620'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'SPAC1F7.10'
$gf_placeholder = 'HOM03P005297'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_733G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
Notice (8): Undefined index: common_name [APP/View/Analysis/custom_tree_creation.ctp, line 169]Code Context echo "<td><input type='checkbox' name='selected_genes[]' value='".$similarity_hit['gene_id']."' ".$checked." /></td>\n";
echo "<td>".$this->Html->link($similarity_hit_gene,array("controller"=>"genes","action"=>"view",$similarity_hit_gene),array("target"=>"_blank"))."</td>\n";
echo "<td>".$this->Html->link($similarity_hit['common_name'],array("controller"=>"organism","action"=>"view",urlencode($similarity_hit['common_name'])))."</td>\n";
$viewFile = '/xtras/group/biocomp/plaza/versions/plaza_pico_03/app/View/Analysis/custom_tree_creation.ctp'
$dataForView = array(
'allowed_extra_sequences_types' => array(
'aa' => 'Protein',
'dna' => 'DNA'
),
'allowed_editing_methods' => array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
),
'allowed_tree_programs' => array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
),
'allowed_msa_programs' => array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
),
'allowed_number_blasthits' => array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
),
'similarity_hits_genes' => array(
'AT3G15620' => array(
'gene_id' => 'AT3G15620',
'e_value' => '0.0',
'bit_score' => '1158',
'alignment_length' => '557',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00042G00260' => array(
'gene_id' => 'ATR_00042G00260',
'e_value' => '0.0',
'bit_score' => '780',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'OS02G10990' => array(
'gene_id' => 'OS02G10990',
'e_value' => '0.0',
'bit_score' => '731',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00012G00840' => array(
'gene_id' => 'PP00012G00840',
'e_value' => '0.0',
'bit_score' => '690',
'alignment_length' => '514',
'identity_percentage' => '62.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G06480' => array(
'gene_id' => 'CV00G06480',
'e_value' => '0.0',
'bit_score' => '587',
'alignment_length' => '484',
'identity_percentage' => '57.02',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.10g00560' => array(
'gene_id' => 'RCC4223.10g00560',
'e_value' => '0.0',
'bit_score' => '569',
'alignment_length' => '525',
'identity_percentage' => '53.52',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_031G00590' => array(
'gene_id' => 'CNC64A_031G00590',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '504',
'identity_percentage' => '55.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'PI00G34380' => array(
'gene_id' => 'PI00G34380',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '534',
'identity_percentage' => '53.56',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'CR06G08080' => array(
'gene_id' => 'CR06G08080',
'e_value' => '0.0',
'bit_score' => '567',
'alignment_length' => '504',
'identity_percentage' => '53.77',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'AC00G14670' => array(
'gene_id' => 'AC00G14670',
'e_value' => '0.0',
'bit_score' => '558',
'alignment_length' => '505',
'identity_percentage' => '54.46',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G03120' => array(
'gene_id' => 'MRCC299_10G03120',
'e_value' => '0.0',
'bit_score' => '541',
'alignment_length' => '552',
'identity_percentage' => '49.09',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'VC00G69290' => array(
'gene_id' => 'VC00G69290',
'e_value' => '0.0',
'bit_score' => '540',
'alignment_length' => '503',
'identity_percentage' => '52.49',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'OM_03G00330' => array(
'gene_id' => 'OM_03G00330',
'e_value' => '0.0',
'bit_score' => '530',
'alignment_length' => '556',
'identity_percentage' => '47.84',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'OT_05G00290' => array(
'gene_id' => 'OT_05G00290',
'e_value' => '3e-179',
'bit_score' => '525',
'alignment_length' => '553',
'identity_percentage' => '47.02',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'MP09G02830' => array(
'gene_id' => 'MP09G02830',
'e_value' => '3e-177',
'bit_score' => '519',
'alignment_length' => '552',
'identity_percentage' => '49.64',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000020038' => array(
'gene_id' => 'ENSMUSG00000020038',
'e_value' => '6e-175',
'bit_score' => '515',
'alignment_length' => '501',
'identity_percentage' => '50.30',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'ENSG00000008405' => array(
'gene_id' => 'ENSG00000008405',
'e_value' => '7e-175',
'bit_score' => '514',
'alignment_length' => '501',
'identity_percentage' => '50.50',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
[maximum depth reached]
)
),
'ENSMUSG00000068742' => array(
'gene_id' => 'ENSMUSG00000068742',
'e_value' => '1e-171',
'bit_score' => '506',
'alignment_length' => '502',
'identity_percentage' => '50.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
[maximum depth reached]
)
),
'OL05G00260' => array(
'gene_id' => 'OL05G00260',
'e_value' => '1e-170',
'bit_score' => '503',
'alignment_length' => '545',
'identity_percentage' => '46.42',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0016054' => array(
'gene_id' => 'FBgn0016054',
'e_value' => '5e-168',
'bit_score' => '495',
'alignment_length' => '515',
'identity_percentage' => '47.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_05G00280' => array(
'gene_id' => 'ORCC809_05G00280',
'e_value' => '9e-167',
'bit_score' => '523',
'alignment_length' => '557',
'identity_percentage' => '46.32',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100161g13' => array(
'gene_id' => 'Naga_100161g13',
'e_value' => '5e-166',
'bit_score' => '492',
'alignment_length' => '533',
'identity_percentage' => '47.28',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'gsu79870' => array(
'gene_id' => 'gsu79870',
'e_value' => '2e-161',
'bit_score' => '479',
'alignment_length' => '517',
'identity_percentage' => '45.45',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM15G03480' => array(
'gene_id' => 'CM15G03480',
'e_value' => '4e-160',
'bit_score' => '474',
'alignment_length' => '524',
'identity_percentage' => '46.37',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'emh83630' => array(
'gene_id' => 'emh83630',
'e_value' => '4e-158',
'bit_score' => '468',
'alignment_length' => '488',
'identity_percentage' => '47.95',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh539160' => array(
'gene_id' => 'emh539160',
'e_value' => '2e-155',
'bit_score' => '466',
'alignment_length' => '487',
'identity_percentage' => '47.84',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ES0194G00110' => array(
'gene_id' => 'ES0194G00110',
'e_value' => '9e-155',
'bit_score' => '461',
'alignment_length' => '501',
'identity_percentage' => '49.50',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_03G00300' => array(
'gene_id' => 'BPRRCC1105_03G00300',
'e_value' => '9e-145',
'bit_score' => '437',
'alignment_length' => '580',
'identity_percentage' => '42.93',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'PTI_08G03200' => array(
'gene_id' => 'PTI_08G03200',
'e_value' => '4e-139',
'bit_score' => '422',
'alignment_length' => '520',
'identity_percentage' => '44.04',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'ccr31740' => array(
'gene_id' => 'ccr31740',
'e_value' => '8e-129',
'bit_score' => '395',
'alignment_length' => '521',
'identity_percentage' => '41.65',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'phs372210' => array(
'gene_id' => 'phs372210',
'e_value' => '7e-128',
'bit_score' => '391',
'alignment_length' => '546',
'identity_percentage' => '39.01',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'phs349220' => array(
'gene_id' => 'phs349220',
'e_value' => '5e-123',
'bit_score' => '378',
'alignment_length' => '523',
'identity_percentage' => '40.54',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'phs349300' => array(
'gene_id' => 'phs349300',
'e_value' => '1e-114',
'bit_score' => '363',
'alignment_length' => '559',
'identity_percentage' => '37.57',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
[maximum depth reached]
)
),
'FBgn0025680' => array(
'gene_id' => 'FBgn0025680',
'e_value' => '1e-105',
'bit_score' => '335',
'alignment_length' => '533',
'identity_percentage' => '35.27',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
[maximum depth reached]
)
),
'AA0003G05580' => array(
'gene_id' => 'AA0003G05580',
'e_value' => '8e-92',
'bit_score' => '298',
'alignment_length' => '519',
'identity_percentage' => '37.96',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'emh159140' => array(
'gene_id' => 'emh159140',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'emh547370' => array(
'gene_id' => 'emh547370',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.07g00760' => array(
'gene_id' => 'RCC4223.07g00760',
'e_value' => '2e-52',
'bit_score' => '194',
'alignment_length' => '494',
'identity_percentage' => '30.16',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PI00G04790' => array(
'gene_id' => 'PI00G04790',
'e_value' => '5e-52',
'bit_score' => '193',
'alignment_length' => '494',
'identity_percentage' => '29.76',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'OS02G41550' => array(
'gene_id' => 'OS02G41550',
'e_value' => '6e-51',
'bit_score' => '190',
'alignment_length' => '548',
'identity_percentage' => '29.38',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'MP13G00590' => array(
'gene_id' => 'MP13G00590',
'e_value' => '5e-50',
'bit_score' => '186',
'alignment_length' => '515',
'identity_percentage' => '29.71',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'AT1G04400' => array(
'gene_id' => 'AT1G04400',
'e_value' => '7e-50',
'bit_score' => '186',
'alignment_length' => '505',
'identity_percentage' => '30.69',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00148G00690' => array(
'gene_id' => 'ATR_00148G00690',
'e_value' => '1e-49',
'bit_score' => '186',
'alignment_length' => '542',
'identity_percentage' => '29.52',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'AC00G11930' => array(
'gene_id' => 'AC00G11930',
'e_value' => '7e-49',
'bit_score' => '182',
'alignment_length' => '485',
'identity_percentage' => '28.04',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'OM_01G00240' => array(
'gene_id' => 'OM_01G00240',
'e_value' => '3e-47',
'bit_score' => '178',
'alignment_length' => '513',
'identity_percentage' => '30.02',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'PP00002G01920' => array(
'gene_id' => 'PP00002G01920',
'e_value' => '5e-47',
'bit_score' => '179',
'alignment_length' => '512',
'identity_percentage' => '27.73',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'FC007G01830' => array(
'gene_id' => 'FC007G01830',
'e_value' => '9e-47',
'bit_score' => '177',
'alignment_length' => '507',
'identity_percentage' => '29.98',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'AT5G24850' => array(
'gene_id' => 'AT5G24850',
'e_value' => '7e-46',
'bit_score' => '174',
'alignment_length' => '462',
'identity_percentage' => '29.44',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'PI00G51840' => array(
'gene_id' => 'PI00G51840',
'e_value' => '1e-45',
'bit_score' => '173',
'alignment_length' => '539',
'identity_percentage' => '28.94',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'VC00G59430' => array(
'gene_id' => 'VC00G59430',
'e_value' => '2e-45',
'bit_score' => '176',
'alignment_length' => '489',
'identity_percentage' => '28.02',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_10G00130' => array(
'gene_id' => 'MRCC299_10G00130',
'e_value' => '4e-44',
'bit_score' => '168',
'alignment_length' => '510',
'identity_percentage' => '29.02',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'gsu109050' => array(
'gene_id' => 'gsu109050',
'e_value' => '5e-44',
'bit_score' => '172',
'alignment_length' => '517',
'identity_percentage' => '28.05',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'OS06G45100' => array(
'gene_id' => 'OS06G45100',
'e_value' => '7e-44',
'bit_score' => '169',
'alignment_length' => '468',
'identity_percentage' => '29.91',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.08g01600' => array(
'gene_id' => 'RCC4223.08g01600',
'e_value' => '7e-43',
'bit_score' => '166',
'alignment_length' => '530',
'identity_percentage' => '29.43',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'ES0002G00990' => array(
'gene_id' => 'ES0002G00990',
'e_value' => '2e-42',
'bit_score' => '164',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'OS04G37920' => array(
'gene_id' => 'OS04G37920',
'e_value' => '2e-42',
'bit_score' => '165',
'alignment_length' => '530',
'identity_percentage' => '29.06',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'PP00488G00050' => array(
'gene_id' => 'PP00488G00050',
'e_value' => '3e-42',
'bit_score' => '164',
'alignment_length' => '498',
'identity_percentage' => '28.11',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CR06G12190' => array(
'gene_id' => 'CR06G12190',
'e_value' => '1e-41',
'bit_score' => '165',
'alignment_length' => '498',
'identity_percentage' => '27.11',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OS02G36380' => array(
'gene_id' => 'OS02G36380',
'e_value' => '4e-41',
'bit_score' => '162',
'alignment_length' => '546',
'identity_percentage' => '28.94',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_008G02490' => array(
'gene_id' => 'CNC64A_008G02490',
'e_value' => '6e-41',
'bit_score' => '163',
'alignment_length' => '518',
'identity_percentage' => '28.76',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'ES0002G02030' => array(
'gene_id' => 'ES0002G02030',
'e_value' => '2e-40',
'bit_score' => '158',
'alignment_length' => '508',
'identity_percentage' => '28.74',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
[maximum depth reached]
)
),
'AA0004G04420' => array(
'gene_id' => 'AA0004G04420',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '463',
'identity_percentage' => '27.43',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'CV00G08260' => array(
'gene_id' => 'CV00G08260',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '492',
'identity_percentage' => '27.24',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'ORCC809_01G00210' => array(
'gene_id' => 'ORCC809_01G00210',
'e_value' => '9e-39',
'bit_score' => '155',
'alignment_length' => '515',
'identity_percentage' => '27.77',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
[maximum depth reached]
)
),
'AC00G22630' => array(
'gene_id' => 'AC00G22630',
'e_value' => '1e-38',
'bit_score' => '153',
'alignment_length' => '537',
'identity_percentage' => '26.07',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
[maximum depth reached]
)
),
'TP06G00790' => array(
'gene_id' => 'TP06G00790',
'e_value' => '4e-38',
'bit_score' => '151',
'alignment_length' => '522',
'identity_percentage' => '28.54',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'AT4G08920' => array(
'gene_id' => 'AT4G08920',
'e_value' => '4e-38',
'bit_score' => '152',
'alignment_length' => '528',
'identity_percentage' => '27.84',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'emh295050' => array(
'gene_id' => 'emh295050',
'e_value' => '5e-38',
'bit_score' => '150',
'alignment_length' => '498',
'identity_percentage' => '27.31',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'OT_01G06510' => array(
'gene_id' => 'OT_01G06510',
'e_value' => '5e-37',
'bit_score' => '148',
'alignment_length' => '517',
'identity_percentage' => '28.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'Naga_100190g4' => array(
'gene_id' => 'Naga_100190g4',
'e_value' => '5e-37',
'bit_score' => '149',
'alignment_length' => '510',
'identity_percentage' => '27.06',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
[maximum depth reached]
)
),
'gsu129520' => array(
'gene_id' => 'gsu129520',
'e_value' => '8e-37',
'bit_score' => '147',
'alignment_length' => '525',
'identity_percentage' => '26.29',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CM10G01320' => array(
'gene_id' => 'CM10G01320',
'e_value' => '1e-36',
'bit_score' => '148',
'alignment_length' => '544',
'identity_percentage' => '27.39',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'BPRRCC1105_14G00970' => array(
'gene_id' => 'BPRRCC1105_14G00970',
'e_value' => '1e-36',
'bit_score' => '147',
'alignment_length' => '500',
'identity_percentage' => '30.20',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
[maximum depth reached]
)
),
'OL01G06630' => array(
'gene_id' => 'OL01G06630',
'e_value' => '3e-36',
'bit_score' => '145',
'alignment_length' => '516',
'identity_percentage' => '27.13',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'FC002G07530' => array(
'gene_id' => 'FC002G07530',
'e_value' => '2e-34',
'bit_score' => '139',
'alignment_length' => '495',
'identity_percentage' => '26.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'emh506330' => array(
'gene_id' => 'emh506330',
'e_value' => '1e-33',
'bit_score' => '137',
'alignment_length' => '527',
'identity_percentage' => '26.76',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'CV00G05750' => array(
'gene_id' => 'CV00G05750',
'e_value' => '2e-33',
'bit_score' => '137',
'alignment_length' => '522',
'identity_percentage' => '26.05',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CM01G00440' => array(
'gene_id' => 'CM01G00440',
'e_value' => '2e-32',
'bit_score' => '135',
'alignment_length' => '532',
'identity_percentage' => '26.13',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'ccr195660' => array(
'gene_id' => 'ccr195660',
'e_value' => '4e-32',
'bit_score' => '136',
'alignment_length' => '240',
'identity_percentage' => '32.50',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'ccr184840' => array(
'gene_id' => 'ccr184840',
'e_value' => '4e-31',
'bit_score' => '131',
'alignment_length' => '519',
'identity_percentage' => '25.24',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'VC00G55680' => array(
'gene_id' => 'VC00G55680',
'e_value' => '4e-31',
'bit_score' => '127',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CM08G02740' => array(
'gene_id' => 'CM08G02740',
'e_value' => '6e-31',
'bit_score' => '131',
'alignment_length' => '243',
'identity_percentage' => '34.16',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'VC00G55630' => array(
'gene_id' => 'VC00G55630',
'e_value' => '2e-30',
'bit_score' => '130',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'CR02G01400' => array(
'gene_id' => 'CR02G01400',
'e_value' => '2e-30',
'bit_score' => '129',
'alignment_length' => '268',
'identity_percentage' => '30.22',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'emh580190' => array(
'gene_id' => 'emh580190',
'e_value' => '2e-30',
'bit_score' => '127',
'alignment_length' => '485',
'identity_percentage' => '26.80',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00038G01230' => array(
'gene_id' => 'ATR_00038G01230',
'e_value' => '1e-29',
'bit_score' => '125',
'alignment_length' => '328',
'identity_percentage' => '28.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CM13G00750' => array(
'gene_id' => 'CM13G00750',
'e_value' => '3e-29',
'bit_score' => '127',
'alignment_length' => '236',
'identity_percentage' => '32.20',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'TP06G01280' => array(
'gene_id' => 'TP06G01280',
'e_value' => '1e-28',
'bit_score' => '122',
'alignment_length' => '437',
'identity_percentage' => '26.77',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'OT_15G01070' => array(
'gene_id' => 'OT_15G01070',
'e_value' => '4e-28',
'bit_score' => '123',
'alignment_length' => '497',
'identity_percentage' => '25.96',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
[maximum depth reached]
)
),
'PTI_05G04390' => array(
'gene_id' => 'PTI_05G04390',
'e_value' => '8e-28',
'bit_score' => '121',
'alignment_length' => '295',
'identity_percentage' => '32.20',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'MP05G02150' => array(
'gene_id' => 'MP05G02150',
'e_value' => '9e-28',
'bit_score' => '122',
'alignment_length' => '551',
'identity_percentage' => '25.23',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'CM17G04540' => array(
'gene_id' => 'CM17G04540',
'e_value' => '1e-27',
'bit_score' => '122',
'alignment_length' => '199',
'identity_percentage' => '33.67',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'AP00G52620' => array(
'gene_id' => 'AP00G52620',
'e_value' => '3e-27',
'bit_score' => '119',
'alignment_length' => '266',
'identity_percentage' => '30.45',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_08G04600' => array(
'gene_id' => 'MRCC299_08G04600',
'e_value' => '7e-27',
'bit_score' => '117',
'alignment_length' => '229',
'identity_percentage' => '32.75',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00025G01980' => array(
'gene_id' => 'ATR_00025G01980',
'e_value' => '1e-26',
'bit_score' => '117',
'alignment_length' => '476',
'identity_percentage' => '25.00',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CV00G20060' => array(
'gene_id' => 'CV00G20060',
'e_value' => '1e-26',
'bit_score' => '118',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.03g09720' => array(
'gene_id' => 'RCC4223.03g09720',
'e_value' => '3e-26',
'bit_score' => '116',
'alignment_length' => '492',
'identity_percentage' => '24.59',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'CV00G87370' => array(
'gene_id' => 'CV00G87370',
'e_value' => '2e-24',
'bit_score' => '109',
'alignment_length' => '318',
'identity_percentage' => '29.87',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'FC006G00170' => array(
'gene_id' => 'FC006G00170',
'e_value' => '4e-24',
'bit_score' => '102',
'alignment_length' => '91',
'identity_percentage' => '52.75',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_09G03300' => array(
'gene_id' => 'PTI_09G03300',
'e_value' => '1e-23',
'bit_score' => '109',
'alignment_length' => '537',
'identity_percentage' => '22.91',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'MRCC299_07G02380' => array(
'gene_id' => 'MRCC299_07G02380',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '513',
'identity_percentage' => '25.73',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
[maximum depth reached]
)
),
'emh604690' => array(
'gene_id' => 'emh604690',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
[maximum depth reached]
)
),
'AA0003G01490' => array(
'gene_id' => 'AA0003G01490',
'e_value' => '4e-23',
'bit_score' => '100',
'alignment_length' => '129',
'identity_percentage' => '41.09',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'gsu87130' => array(
'gene_id' => 'gsu87130',
'e_value' => '6e-23',
'bit_score' => '105',
'alignment_length' => '316',
'identity_percentage' => '30.06',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'CV00G49240' => array(
'gene_id' => 'CV00G49240',
'e_value' => '6e-23',
'bit_score' => '106',
'alignment_length' => '518',
'identity_percentage' => '25.10',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
[maximum depth reached]
)
),
'CM04G01210' => array(
'gene_id' => 'CM04G01210',
'e_value' => '2e-22',
'bit_score' => '103',
'alignment_length' => '334',
'identity_percentage' => '27.84',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
[maximum depth reached]
)
),
'gsu126640' => array(
'gene_id' => 'gsu126640',
'e_value' => '3e-22',
'bit_score' => '105',
'alignment_length' => '564',
'identity_percentage' => '23.23',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
[maximum depth reached]
)
),
'FC001G10930' => array(
'gene_id' => 'FC001G10930',
'e_value' => '3e-22',
'bit_score' => '102',
'alignment_length' => '239',
'identity_percentage' => '29.29',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'PTI_06G00880' => array(
'gene_id' => 'PTI_06G00880',
'e_value' => '4e-22',
'bit_score' => '104',
'alignment_length' => '369',
'identity_percentage' => '27.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'OL14G01630' => array(
'gene_id' => 'OL14G01630',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'OL14G00970' => array(
'gene_id' => 'OL14G00970',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
[maximum depth reached]
)
),
'RCC4223.05g03580' => array(
'gene_id' => 'RCC4223.05g03580',
'e_value' => '9e-22',
'bit_score' => '102',
'alignment_length' => '322',
'identity_percentage' => '30.12',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
[maximum depth reached]
)
),
'PI00G28390' => array(
'gene_id' => 'PI00G28390',
'e_value' => '6e-21',
'bit_score' => '100',
'alignment_length' => '498',
'identity_percentage' => '24.70',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'MP04G04070' => array(
'gene_id' => 'MP04G04070',
'e_value' => '8e-21',
'bit_score' => '100',
'alignment_length' => '545',
'identity_percentage' => '24.77',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
[maximum depth reached]
)
),
'ccr74060' => array(
'gene_id' => 'ccr74060',
'e_value' => '2e-19',
'bit_score' => '96.7',
'alignment_length' => '218',
'identity_percentage' => '28.90',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'ATR_00039G02190' => array(
'gene_id' => 'ATR_00039G02190',
'e_value' => '2e-19',
'bit_score' => '95.1',
'alignment_length' => '321',
'identity_percentage' => '29.28',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'TP07G04330' => array(
'gene_id' => 'TP07G04330',
'e_value' => '6e-19',
'bit_score' => '94.4',
'alignment_length' => '545',
'identity_percentage' => '22.57',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'TP03G06670' => array(
'gene_id' => 'TP03G06670',
'e_value' => '8e-19',
'bit_score' => '92.8',
'alignment_length' => '280',
'identity_percentage' => '26.43',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'PP00255G00220' => array(
'gene_id' => 'PP00255G00220',
'e_value' => '1e-18',
'bit_score' => '92.4',
'alignment_length' => '391',
'identity_percentage' => '25.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'PI00G06020' => array(
'gene_id' => 'PI00G06020',
'e_value' => '1e-18',
'bit_score' => '92.0',
'alignment_length' => '323',
'identity_percentage' => '29.41',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
[maximum depth reached]
)
),
'CR01G06680' => array(
'gene_id' => 'CR01G06680',
'e_value' => '2e-18',
'bit_score' => '93.2',
'alignment_length' => '292',
'identity_percentage' => '27.40',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'OS03G22330' => array(
'gene_id' => 'OS03G22330',
'e_value' => '1e-17',
'bit_score' => '89.4',
'alignment_length' => '327',
'identity_percentage' => '27.83',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
[maximum depth reached]
)
),
'YOR386W' => array(
'gene_id' => 'YOR386W',
'e_value' => '1e-17',
'bit_score' => '90.1',
'alignment_length' => '502',
'identity_percentage' => '23.31',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
[maximum depth reached]
)
),
'OM_05G00230' => array(
'gene_id' => 'OM_05G00230',
'e_value' => '4e-17',
'bit_score' => '89.4',
'alignment_length' => '262',
'identity_percentage' => '28.24',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
[maximum depth reached]
)
),
'AT2G47590' => array(
'gene_id' => 'AT2G47590',
'e_value' => '5e-17',
'bit_score' => '87.8',
'alignment_length' => '313',
'identity_percentage' => '28.43',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
[maximum depth reached]
)
),
'CR12G11270' => array(
'gene_id' => 'CR12G11270',
'e_value' => '6e-17',
'bit_score' => '87.8',
'alignment_length' => '307',
'identity_percentage' => '28.99',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
[maximum depth reached]
)
),
'PP00043G00110' => array(
'gene_id' => 'PP00043G00110',
'e_value' => '2e-15',
'bit_score' => '83.2',
'alignment_length' => '364',
'identity_percentage' => '27.75',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_015G01850' => array(
'gene_id' => 'CNC64A_015G01850',
'e_value' => '6e-15',
'bit_score' => '82.0',
'alignment_length' => '283',
'identity_percentage' => '23.32',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
),
'VC00G18140' => array(
'gene_id' => 'VC00G18140',
'e_value' => '3e-14',
'bit_score' => '79.7',
'alignment_length' => '188',
'identity_percentage' => '29.79',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
[maximum depth reached]
)
),
'ccr46120' => array(
'gene_id' => 'ccr46120',
'e_value' => '4e-14',
'bit_score' => '78.6',
'alignment_length' => '325',
'identity_percentage' => '23.69',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
[maximum depth reached]
)
),
'FC004G07480' => array(
'gene_id' => 'FC004G07480',
'e_value' => '1e-12',
'bit_score' => '74.7',
'alignment_length' => '256',
'identity_percentage' => '26.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
[maximum depth reached]
)
),
'AA0019G00040' => array(
'gene_id' => 'AA0019G00040',
'e_value' => '2e-09',
'bit_score' => '59.3',
'alignment_length' => '72',
'identity_percentage' => '45.83',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'PP00002G01950' => array(
'gene_id' => 'PP00002G01950',
'e_value' => '1e-08',
'bit_score' => '61.6',
'alignment_length' => '76',
'identity_percentage' => '31.58',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
[maximum depth reached]
)
),
'ATR_02137G00010' => array(
'gene_id' => 'ATR_02137G00010',
'e_value' => '1e-08',
'bit_score' => '58.9',
'alignment_length' => '165',
'identity_percentage' => '29.70',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_733G00010' => array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
[maximum depth reached]
)
),
'PTI_24G00100' => array(
'gene_id' => 'PTI_24G00100',
'e_value' => '2e-07',
'bit_score' => '58.2',
'alignment_length' => '188',
'identity_percentage' => '27.66',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
[maximum depth reached]
)
),
'TP08G00290' => array(
'gene_id' => 'TP08G00290',
'e_value' => '2e-07',
'bit_score' => '57.4',
'alignment_length' => '163',
'identity_percentage' => '30.06',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
[maximum depth reached]
)
),
'AA0014G00030' => array(
'gene_id' => 'AA0014G00030',
'e_value' => '4e-07',
'bit_score' => '54.3',
'alignment_length' => '108',
'identity_percentage' => '37.04',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
[maximum depth reached]
)
),
'CNC64A_002G03840' => array(
'gene_id' => 'CNC64A_002G03840',
'e_value' => '1e-06',
'bit_score' => '54.7',
'alignment_length' => '296',
'identity_percentage' => '25.68',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
[maximum depth reached]
)
)
),
'similarity_hits_species' => array(
'ath' => array(
(int) 0 => 'AT3G15620',
(int) 1 => 'AT1G04400',
(int) 2 => 'AT5G24850',
(int) 3 => 'AT4G08920',
(int) 4 => 'AT2G47590'
),
'atr' => array(
(int) 0 => 'ATR_00042G00260',
(int) 1 => 'ATR_00148G00690',
(int) 2 => 'ATR_00038G01230',
(int) 3 => 'ATR_00025G01980',
(int) 4 => 'ATR_00039G02190',
(int) 5 => 'ATR_02137G00010'
),
'osa' => array(
(int) 0 => 'OS02G10990',
(int) 1 => 'OS02G41550',
(int) 2 => 'OS06G45100',
(int) 3 => 'OS04G37920',
(int) 4 => 'OS02G36380',
(int) 5 => 'OS03G22330'
),
'ppa' => array(
(int) 0 => 'PP00012G00840',
(int) 1 => 'PP00002G01920',
(int) 2 => 'PP00488G00050',
(int) 3 => 'PP00255G00220',
(int) 4 => 'PP00043G00110',
(int) 5 => 'PP00002G01950'
),
'cvu' => array(
(int) 0 => 'CV00G06480',
(int) 1 => 'CV00G08260',
(int) 2 => 'CV00G05750',
(int) 3 => 'CV00G20060',
(int) 4 => 'CV00G87370',
(int) 5 => 'CV00G49240'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.10g00560',
(int) 1 => 'RCC4223.07g00760',
(int) 2 => 'RCC4223.08g01600',
(int) 3 => 'RCC4223.03g09720',
(int) 4 => 'RCC4223.05g03580'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_031G00590',
(int) 1 => 'CNC64A_008G02490',
(int) 2 => 'CNC64A_015G01850',
(int) 3 => 'CNC64A_002G03840'
),
'pse3' => array(
(int) 0 => 'PI00G34380',
(int) 1 => 'PI00G04790',
(int) 2 => 'PI00G51840',
(int) 3 => 'PI00G28390',
(int) 4 => 'PI00G06020'
),
'cre' => array(
(int) 0 => 'CR06G08080',
(int) 1 => 'CR06G12190',
(int) 2 => 'CR02G01400',
(int) 3 => 'CR01G06680',
(int) 4 => 'CR12G11270'
),
'acg' => array(
(int) 0 => 'AC00G14670',
(int) 1 => 'AC00G11930',
(int) 2 => 'AC00G22630'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_10G03120',
(int) 1 => 'MRCC299_10G00130',
(int) 2 => 'MRCC299_08G04600',
(int) 3 => 'MRCC299_07G02380'
),
'vca' => array(
(int) 0 => 'VC00G69290',
(int) 1 => 'VC00G59430',
(int) 2 => 'VC00G55680',
(int) 3 => 'VC00G55630',
(int) 4 => 'VC00G18140'
),
'ome' => array(
(int) 0 => 'OM_03G00330',
(int) 1 => 'OM_01G00240',
(int) 2 => 'OM_05G00230'
),
'ota' => array(
(int) 0 => 'OT_05G00290',
(int) 1 => 'OT_01G06510',
(int) 2 => 'OT_15G01070'
),
'mpu' => array(
(int) 0 => 'MP09G02830',
(int) 1 => 'MP13G00590',
(int) 2 => 'MP05G02150',
(int) 3 => 'MP04G04070'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000020038',
(int) 1 => 'ENSMUSG00000068742'
),
'hom' => array(
(int) 0 => 'ENSG00000008405'
),
'olu' => array(
(int) 0 => 'OL05G00260',
(int) 1 => 'OL01G06630',
(int) 2 => 'OL14G01630',
(int) 3 => 'OL14G00970'
),
'drm' => array(
(int) 0 => 'FBgn0016054',
(int) 1 => 'FBgn0025680'
),
'orcc809' => array(
(int) 0 => 'ORCC809_05G00280',
(int) 1 => 'ORCC809_01G00210'
),
'nga' => array(
(int) 0 => 'Naga_100161g13',
(int) 1 => 'Naga_100190g4'
),
'gsu' => array(
(int) 0 => 'gsu79870',
(int) 1 => 'gsu109050',
(int) 2 => 'gsu129520',
(int) 3 => 'gsu87130',
(int) 4 => 'gsu126640'
),
'cme' => array(
(int) 0 => 'CM15G03480',
(int) 1 => 'CM10G01320',
(int) 2 => 'CM01G00440',
(int) 3 => 'CM08G02740',
(int) 4 => 'CM13G00750',
(int) 5 => 'CM17G04540',
(int) 6 => 'CM04G01210'
),
'emh' => array(
(int) 0 => 'emh83630',
(int) 1 => 'emh539160',
(int) 2 => 'emh159140',
(int) 3 => 'emh547370',
(int) 4 => 'emh295050',
(int) 5 => 'emh506330',
(int) 6 => 'emh580190',
(int) 7 => 'emh604690'
),
'esi' => array(
(int) 0 => 'ES0194G00110',
(int) 1 => 'ES0002G00990',
(int) 2 => 'ES0002G02030'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_03G00300',
(int) 1 => 'BPRRCC1105_14G00970'
),
'ptri' => array(
(int) 0 => 'PTI_08G03200',
(int) 1 => 'PTI_05G04390',
(int) 2 => 'PTI_09G03300',
(int) 3 => 'PTI_06G00880',
(int) 4 => 'PTI_24G00100'
),
'ccr' => array(
(int) 0 => 'ccr31740',
(int) 1 => 'ccr195660',
(int) 2 => 'ccr184840',
(int) 3 => 'ccr74060',
(int) 4 => 'ccr46120'
),
'phs' => array(
(int) 0 => 'phs372210',
(int) 1 => 'phs349220',
(int) 2 => 'phs349300'
),
'aan' => array(
(int) 0 => 'AA0003G05580',
(int) 1 => 'AA0004G04420',
(int) 2 => 'AA0003G01490',
(int) 3 => 'AA0019G00040',
(int) 4 => 'AA0014G00030'
),
'fcy' => array(
(int) 0 => 'FC007G01830',
(int) 1 => 'FC002G07530',
(int) 2 => 'FC006G00170',
(int) 3 => 'FC001G10930',
(int) 4 => 'FC004G07480'
),
'tps' => array(
(int) 0 => 'TP06G00790',
(int) 1 => 'TP06G01280',
(int) 2 => 'TP07G04330',
(int) 3 => 'TP03G06670',
(int) 4 => 'TP08G00290'
),
'apr' => array(
(int) 0 => 'AP00G52620'
),
'sac' => array(
(int) 0 => 'YOR386W'
)
),
'gene_id' => 'AT3G15620',
'all_species_index' => array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'all_species' => array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
),
'gene_family_types_information' => array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
),
'gene_family_types_configuration' => array(),
'data_identifier' => 'AT3G15620',
'data_type' => 'gene_id',
'allow_async_use' => true,
'gene_placeholder' => 'SPAC1F7.10',
'gf_placeholder' => 'HOM03P005297',
'title_for_layout' => 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
)
$allowed_extra_sequences_types = array(
'aa' => 'Protein',
'dna' => 'DNA'
)
$allowed_editing_methods = array(
'column' => 'Positions only',
'row' => 'Genes only',
'column_row' => 'Positions and Genes',
'none' => 'No editing'
)
$allowed_tree_programs = array(
'fasttree' => 'FastTree',
'iqtree' => 'IQ-TREE (includes model testing)',
'raxml' => 'RAxML',
'phyml' => 'PhyML'
)
$allowed_msa_programs = array(
'muscle' => 'MUSCLE',
'mafft' => 'MAFFT'
)
$allowed_number_blasthits = array(
(int) 0 => 'all',
(int) 1 => (int) 20,
(int) 2 => (int) 10,
(int) 3 => (int) 5,
(int) 4 => (int) 1
)
$similarity_hits_genes = array(
'AT3G15620' => array(
'gene_id' => 'AT3G15620',
'e_value' => '0.0',
'bit_score' => '1158',
'alignment_length' => '557',
'identity_percentage' => '100.00',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ATR_00042G00260' => array(
'gene_id' => 'ATR_00042G00260',
'e_value' => '0.0',
'bit_score' => '780',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OS02G10990' => array(
'gene_id' => 'OS02G10990',
'e_value' => '0.0',
'bit_score' => '731',
'alignment_length' => '528',
'identity_percentage' => '67.61',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PP00012G00840' => array(
'gene_id' => 'PP00012G00840',
'e_value' => '0.0',
'bit_score' => '690',
'alignment_length' => '514',
'identity_percentage' => '62.26',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CV00G06480' => array(
'gene_id' => 'CV00G06480',
'e_value' => '0.0',
'bit_score' => '587',
'alignment_length' => '484',
'identity_percentage' => '57.02',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'RCC4223.10g00560' => array(
'gene_id' => 'RCC4223.10g00560',
'e_value' => '0.0',
'bit_score' => '569',
'alignment_length' => '525',
'identity_percentage' => '53.52',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CNC64A_031G00590' => array(
'gene_id' => 'CNC64A_031G00590',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '504',
'identity_percentage' => '55.16',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PI00G34380' => array(
'gene_id' => 'PI00G34380',
'e_value' => '0.0',
'bit_score' => '566',
'alignment_length' => '534',
'identity_percentage' => '53.56',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CR06G08080' => array(
'gene_id' => 'CR06G08080',
'e_value' => '0.0',
'bit_score' => '567',
'alignment_length' => '504',
'identity_percentage' => '53.77',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'AC00G14670' => array(
'gene_id' => 'AC00G14670',
'e_value' => '0.0',
'bit_score' => '558',
'alignment_length' => '505',
'identity_percentage' => '54.46',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'MRCC299_10G03120' => array(
'gene_id' => 'MRCC299_10G03120',
'e_value' => '0.0',
'bit_score' => '541',
'alignment_length' => '552',
'identity_percentage' => '49.09',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'VC00G69290' => array(
'gene_id' => 'VC00G69290',
'e_value' => '0.0',
'bit_score' => '540',
'alignment_length' => '503',
'identity_percentage' => '52.49',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OM_03G00330' => array(
'gene_id' => 'OM_03G00330',
'e_value' => '0.0',
'bit_score' => '530',
'alignment_length' => '556',
'identity_percentage' => '47.84',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OT_05G00290' => array(
'gene_id' => 'OT_05G00290',
'e_value' => '3e-179',
'bit_score' => '525',
'alignment_length' => '553',
'identity_percentage' => '47.02',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'MP09G02830' => array(
'gene_id' => 'MP09G02830',
'e_value' => '3e-177',
'bit_score' => '519',
'alignment_length' => '552',
'identity_percentage' => '49.64',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSMUSG00000020038' => array(
'gene_id' => 'ENSMUSG00000020038',
'e_value' => '6e-175',
'bit_score' => '515',
'alignment_length' => '501',
'identity_percentage' => '50.30',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSG00000008405' => array(
'gene_id' => 'ENSG00000008405',
'e_value' => '7e-175',
'bit_score' => '514',
'alignment_length' => '501',
'identity_percentage' => '50.50',
'species' => 'hom',
'common_name' => 'Homo sapiens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ENSMUSG00000068742' => array(
'gene_id' => 'ENSMUSG00000068742',
'e_value' => '1e-171',
'bit_score' => '506',
'alignment_length' => '502',
'identity_percentage' => '50.00',
'species' => 'mus',
'common_name' => 'Mus musculus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'OL05G00260' => array(
'gene_id' => 'OL05G00260',
'e_value' => '1e-170',
'bit_score' => '503',
'alignment_length' => '545',
'identity_percentage' => '46.42',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'FBgn0016054' => array(
'gene_id' => 'FBgn0016054',
'e_value' => '5e-168',
'bit_score' => '495',
'alignment_length' => '515',
'identity_percentage' => '47.96',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ORCC809_05G00280' => array(
'gene_id' => 'ORCC809_05G00280',
'e_value' => '9e-167',
'bit_score' => '523',
'alignment_length' => '557',
'identity_percentage' => '46.32',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'Naga_100161g13' => array(
'gene_id' => 'Naga_100161g13',
'e_value' => '5e-166',
'bit_score' => '492',
'alignment_length' => '533',
'identity_percentage' => '47.28',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'gsu79870' => array(
'gene_id' => 'gsu79870',
'e_value' => '2e-161',
'bit_score' => '479',
'alignment_length' => '517',
'identity_percentage' => '45.45',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'CM15G03480' => array(
'gene_id' => 'CM15G03480',
'e_value' => '4e-160',
'bit_score' => '474',
'alignment_length' => '524',
'identity_percentage' => '46.37',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh83630' => array(
'gene_id' => 'emh83630',
'e_value' => '4e-158',
'bit_score' => '468',
'alignment_length' => '488',
'identity_percentage' => '47.95',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh539160' => array(
'gene_id' => 'emh539160',
'e_value' => '2e-155',
'bit_score' => '466',
'alignment_length' => '487',
'identity_percentage' => '47.84',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ES0194G00110' => array(
'gene_id' => 'ES0194G00110',
'e_value' => '9e-155',
'bit_score' => '461',
'alignment_length' => '501',
'identity_percentage' => '49.50',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'BPRRCC1105_03G00300' => array(
'gene_id' => 'BPRRCC1105_03G00300',
'e_value' => '9e-145',
'bit_score' => '437',
'alignment_length' => '580',
'identity_percentage' => '42.93',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'PTI_08G03200' => array(
'gene_id' => 'PTI_08G03200',
'e_value' => '4e-139',
'bit_score' => '422',
'alignment_length' => '520',
'identity_percentage' => '44.04',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'ccr31740' => array(
'gene_id' => 'ccr31740',
'e_value' => '8e-129',
'bit_score' => '395',
'alignment_length' => '521',
'identity_percentage' => '41.65',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs372210' => array(
'gene_id' => 'phs372210',
'e_value' => '7e-128',
'bit_score' => '391',
'alignment_length' => '546',
'identity_percentage' => '39.01',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs349220' => array(
'gene_id' => 'phs349220',
'e_value' => '5e-123',
'bit_score' => '378',
'alignment_length' => '523',
'identity_percentage' => '40.54',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'phs349300' => array(
'gene_id' => 'phs349300',
'e_value' => '1e-114',
'bit_score' => '363',
'alignment_length' => '559',
'identity_percentage' => '37.57',
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'FBgn0025680' => array(
'gene_id' => 'FBgn0025680',
'e_value' => '1e-105',
'bit_score' => '335',
'alignment_length' => '533',
'identity_percentage' => '35.27',
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P123142'
)
),
'AA0003G05580' => array(
'gene_id' => 'AA0003G05580',
'e_value' => '8e-92',
'bit_score' => '298',
'alignment_length' => '519',
'identity_percentage' => '37.96',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001895'
)
),
'emh159140' => array(
'gene_id' => 'emh159140',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P050945'
)
),
'emh547370' => array(
'gene_id' => 'emh547370',
'e_value' => '6e-70',
'bit_score' => '234',
'alignment_length' => '308',
'identity_percentage' => '40.58',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P050945'
)
),
'RCC4223.07g00760' => array(
'gene_id' => 'RCC4223.07g00760',
'e_value' => '2e-52',
'bit_score' => '194',
'alignment_length' => '494',
'identity_percentage' => '30.16',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PI00G04790' => array(
'gene_id' => 'PI00G04790',
'e_value' => '5e-52',
'bit_score' => '193',
'alignment_length' => '494',
'identity_percentage' => '29.76',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS02G41550' => array(
'gene_id' => 'OS02G41550',
'e_value' => '6e-51',
'bit_score' => '190',
'alignment_length' => '548',
'identity_percentage' => '29.38',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MP13G00590' => array(
'gene_id' => 'MP13G00590',
'e_value' => '5e-50',
'bit_score' => '186',
'alignment_length' => '515',
'identity_percentage' => '29.71',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT1G04400' => array(
'gene_id' => 'AT1G04400',
'e_value' => '7e-50',
'bit_score' => '186',
'alignment_length' => '505',
'identity_percentage' => '30.69',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00148G00690' => array(
'gene_id' => 'ATR_00148G00690',
'e_value' => '1e-49',
'bit_score' => '186',
'alignment_length' => '542',
'identity_percentage' => '29.52',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'AC00G11930' => array(
'gene_id' => 'AC00G11930',
'e_value' => '7e-49',
'bit_score' => '182',
'alignment_length' => '485',
'identity_percentage' => '28.04',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OM_01G00240' => array(
'gene_id' => 'OM_01G00240',
'e_value' => '3e-47',
'bit_score' => '178',
'alignment_length' => '513',
'identity_percentage' => '30.02',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'PP00002G01920' => array(
'gene_id' => 'PP00002G01920',
'e_value' => '5e-47',
'bit_score' => '179',
'alignment_length' => '512',
'identity_percentage' => '27.73',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'FC007G01830' => array(
'gene_id' => 'FC007G01830',
'e_value' => '9e-47',
'bit_score' => '177',
'alignment_length' => '507',
'identity_percentage' => '29.98',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT5G24850' => array(
'gene_id' => 'AT5G24850',
'e_value' => '7e-46',
'bit_score' => '174',
'alignment_length' => '462',
'identity_percentage' => '29.44',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'PI00G51840' => array(
'gene_id' => 'PI00G51840',
'e_value' => '1e-45',
'bit_score' => '173',
'alignment_length' => '539',
'identity_percentage' => '28.94',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'VC00G59430' => array(
'gene_id' => 'VC00G59430',
'e_value' => '2e-45',
'bit_score' => '176',
'alignment_length' => '489',
'identity_percentage' => '28.02',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MRCC299_10G00130' => array(
'gene_id' => 'MRCC299_10G00130',
'e_value' => '4e-44',
'bit_score' => '168',
'alignment_length' => '510',
'identity_percentage' => '29.02',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'gsu109050' => array(
'gene_id' => 'gsu109050',
'e_value' => '5e-44',
'bit_score' => '172',
'alignment_length' => '517',
'identity_percentage' => '28.05',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS06G45100' => array(
'gene_id' => 'OS06G45100',
'e_value' => '7e-44',
'bit_score' => '169',
'alignment_length' => '468',
'identity_percentage' => '29.91',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'RCC4223.08g01600' => array(
'gene_id' => 'RCC4223.08g01600',
'e_value' => '7e-43',
'bit_score' => '166',
'alignment_length' => '530',
'identity_percentage' => '29.43',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ES0002G00990' => array(
'gene_id' => 'ES0002G00990',
'e_value' => '2e-42',
'bit_score' => '164',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OS04G37920' => array(
'gene_id' => 'OS04G37920',
'e_value' => '2e-42',
'bit_score' => '165',
'alignment_length' => '530',
'identity_percentage' => '29.06',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PP00488G00050' => array(
'gene_id' => 'PP00488G00050',
'e_value' => '3e-42',
'bit_score' => '164',
'alignment_length' => '498',
'identity_percentage' => '28.11',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CR06G12190' => array(
'gene_id' => 'CR06G12190',
'e_value' => '1e-41',
'bit_score' => '165',
'alignment_length' => '498',
'identity_percentage' => '27.11',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OS02G36380' => array(
'gene_id' => 'OS02G36380',
'e_value' => '4e-41',
'bit_score' => '162',
'alignment_length' => '546',
'identity_percentage' => '28.94',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CNC64A_008G02490' => array(
'gene_id' => 'CNC64A_008G02490',
'e_value' => '6e-41',
'bit_score' => '163',
'alignment_length' => '518',
'identity_percentage' => '28.76',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P001769',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ES0002G02030' => array(
'gene_id' => 'ES0002G02030',
'e_value' => '2e-40',
'bit_score' => '158',
'alignment_length' => '508',
'identity_percentage' => '28.74',
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AA0004G04420' => array(
'gene_id' => 'AA0004G04420',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '463',
'identity_percentage' => '27.43',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G08260' => array(
'gene_id' => 'CV00G08260',
'e_value' => '1e-39',
'bit_score' => '155',
'alignment_length' => '492',
'identity_percentage' => '27.24',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ORCC809_01G00210' => array(
'gene_id' => 'ORCC809_01G00210',
'e_value' => '9e-39',
'bit_score' => '155',
'alignment_length' => '515',
'identity_percentage' => '27.77',
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AC00G22630' => array(
'gene_id' => 'AC00G22630',
'e_value' => '1e-38',
'bit_score' => '153',
'alignment_length' => '537',
'identity_percentage' => '26.07',
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'TP06G00790' => array(
'gene_id' => 'TP06G00790',
'e_value' => '4e-38',
'bit_score' => '151',
'alignment_length' => '522',
'identity_percentage' => '28.54',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'AT4G08920' => array(
'gene_id' => 'AT4G08920',
'e_value' => '4e-38',
'bit_score' => '152',
'alignment_length' => '528',
'identity_percentage' => '27.84',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'emh295050' => array(
'gene_id' => 'emh295050',
'e_value' => '5e-38',
'bit_score' => '150',
'alignment_length' => '498',
'identity_percentage' => '27.31',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OT_01G06510' => array(
'gene_id' => 'OT_01G06510',
'e_value' => '5e-37',
'bit_score' => '148',
'alignment_length' => '517',
'identity_percentage' => '28.63',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'Naga_100190g4' => array(
'gene_id' => 'Naga_100190g4',
'e_value' => '5e-37',
'bit_score' => '149',
'alignment_length' => '510',
'identity_percentage' => '27.06',
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'gsu129520' => array(
'gene_id' => 'gsu129520',
'e_value' => '8e-37',
'bit_score' => '147',
'alignment_length' => '525',
'identity_percentage' => '26.29',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM10G01320' => array(
'gene_id' => 'CM10G01320',
'e_value' => '1e-36',
'bit_score' => '148',
'alignment_length' => '544',
'identity_percentage' => '27.39',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'BPRRCC1105_14G00970' => array(
'gene_id' => 'BPRRCC1105_14G00970',
'e_value' => '1e-36',
'bit_score' => '147',
'alignment_length' => '500',
'identity_percentage' => '30.20',
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OL01G06630' => array(
'gene_id' => 'OL01G06630',
'e_value' => '3e-36',
'bit_score' => '145',
'alignment_length' => '516',
'identity_percentage' => '27.13',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'FC002G07530' => array(
'gene_id' => 'FC002G07530',
'e_value' => '2e-34',
'bit_score' => '139',
'alignment_length' => '495',
'identity_percentage' => '26.67',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'emh506330' => array(
'gene_id' => 'emh506330',
'e_value' => '1e-33',
'bit_score' => '137',
'alignment_length' => '527',
'identity_percentage' => '26.76',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G05750' => array(
'gene_id' => 'CV00G05750',
'e_value' => '2e-33',
'bit_score' => '137',
'alignment_length' => '522',
'identity_percentage' => '26.05',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM01G00440' => array(
'gene_id' => 'CM01G00440',
'e_value' => '2e-32',
'bit_score' => '135',
'alignment_length' => '532',
'identity_percentage' => '26.13',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ccr195660' => array(
'gene_id' => 'ccr195660',
'e_value' => '4e-32',
'bit_score' => '136',
'alignment_length' => '240',
'identity_percentage' => '32.50',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ccr184840' => array(
'gene_id' => 'ccr184840',
'e_value' => '4e-31',
'bit_score' => '131',
'alignment_length' => '519',
'identity_percentage' => '25.24',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'VC00G55680' => array(
'gene_id' => 'VC00G55680',
'e_value' => '4e-31',
'bit_score' => '127',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CM08G02740' => array(
'gene_id' => 'CM08G02740',
'e_value' => '6e-31',
'bit_score' => '131',
'alignment_length' => '243',
'identity_percentage' => '34.16',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'VC00G55630' => array(
'gene_id' => 'VC00G55630',
'e_value' => '2e-30',
'bit_score' => '130',
'alignment_length' => '272',
'identity_percentage' => '30.88',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CR02G01400' => array(
'gene_id' => 'CR02G01400',
'e_value' => '2e-30',
'bit_score' => '129',
'alignment_length' => '268',
'identity_percentage' => '30.22',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'emh580190' => array(
'gene_id' => 'emh580190',
'e_value' => '2e-30',
'bit_score' => '127',
'alignment_length' => '485',
'identity_percentage' => '26.80',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'ATR_00038G01230' => array(
'gene_id' => 'ATR_00038G01230',
'e_value' => '1e-29',
'bit_score' => '125',
'alignment_length' => '328',
'identity_percentage' => '28.96',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CM13G00750' => array(
'gene_id' => 'CM13G00750',
'e_value' => '3e-29',
'bit_score' => '127',
'alignment_length' => '236',
'identity_percentage' => '32.20',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'TP06G01280' => array(
'gene_id' => 'TP06G01280',
'e_value' => '1e-28',
'bit_score' => '122',
'alignment_length' => '437',
'identity_percentage' => '26.77',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'OT_15G01070' => array(
'gene_id' => 'OT_15G01070',
'e_value' => '4e-28',
'bit_score' => '123',
'alignment_length' => '497',
'identity_percentage' => '25.96',
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'PTI_05G04390' => array(
'gene_id' => 'PTI_05G04390',
'e_value' => '8e-28',
'bit_score' => '121',
'alignment_length' => '295',
'identity_percentage' => '32.20',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'MP05G02150' => array(
'gene_id' => 'MP05G02150',
'e_value' => '9e-28',
'bit_score' => '122',
'alignment_length' => '551',
'identity_percentage' => '25.23',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'CM17G04540' => array(
'gene_id' => 'CM17G04540',
'e_value' => '1e-27',
'bit_score' => '122',
'alignment_length' => '199',
'identity_percentage' => '33.67',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'AP00G52620' => array(
'gene_id' => 'AP00G52620',
'e_value' => '3e-27',
'bit_score' => '119',
'alignment_length' => '266',
'identity_percentage' => '30.45',
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'MRCC299_08G04600' => array(
'gene_id' => 'MRCC299_08G04600',
'e_value' => '7e-27',
'bit_score' => '117',
'alignment_length' => '229',
'identity_percentage' => '32.75',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00025G01980' => array(
'gene_id' => 'ATR_00025G01980',
'e_value' => '1e-26',
'bit_score' => '117',
'alignment_length' => '476',
'identity_percentage' => '25.00',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P001857'
)
),
'CV00G20060' => array(
'gene_id' => 'CV00G20060',
'e_value' => '1e-26',
'bit_score' => '118',
'alignment_length' => '527',
'identity_percentage' => '27.32',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'RCC4223.03g09720' => array(
'gene_id' => 'RCC4223.03g09720',
'e_value' => '3e-26',
'bit_score' => '116',
'alignment_length' => '492',
'identity_percentage' => '24.59',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068139'
)
),
'CV00G87370' => array(
'gene_id' => 'CV00G87370',
'e_value' => '2e-24',
'bit_score' => '109',
'alignment_length' => '318',
'identity_percentage' => '29.87',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'FC006G00170' => array(
'gene_id' => 'FC006G00170',
'e_value' => '4e-24',
'bit_score' => '102',
'alignment_length' => '91',
'identity_percentage' => '52.75',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P118804'
)
),
'PTI_09G03300' => array(
'gene_id' => 'PTI_09G03300',
'e_value' => '1e-23',
'bit_score' => '109',
'alignment_length' => '537',
'identity_percentage' => '22.91',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068029'
)
),
'MRCC299_07G02380' => array(
'gene_id' => 'MRCC299_07G02380',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '513',
'identity_percentage' => '25.73',
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'emh604690' => array(
'gene_id' => 'emh604690',
'e_value' => '2e-23',
'bit_score' => '108',
'alignment_length' => '406',
'identity_percentage' => '25.12',
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'AA0003G01490' => array(
'gene_id' => 'AA0003G01490',
'e_value' => '4e-23',
'bit_score' => '100',
'alignment_length' => '129',
'identity_percentage' => '41.09',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'gsu87130' => array(
'gene_id' => 'gsu87130',
'e_value' => '6e-23',
'bit_score' => '105',
'alignment_length' => '316',
'identity_percentage' => '30.06',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CV00G49240' => array(
'gene_id' => 'CV00G49240',
'e_value' => '6e-23',
'bit_score' => '106',
'alignment_length' => '518',
'identity_percentage' => '25.10',
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P180839'
)
),
'CM04G01210' => array(
'gene_id' => 'CM04G01210',
'e_value' => '2e-22',
'bit_score' => '103',
'alignment_length' => '334',
'identity_percentage' => '27.84',
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'gsu126640' => array(
'gene_id' => 'gsu126640',
'e_value' => '3e-22',
'bit_score' => '105',
'alignment_length' => '564',
'identity_percentage' => '23.23',
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P160378'
)
),
'FC001G10930' => array(
'gene_id' => 'FC001G10930',
'e_value' => '3e-22',
'bit_score' => '102',
'alignment_length' => '239',
'identity_percentage' => '29.29',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'PTI_06G00880' => array(
'gene_id' => 'PTI_06G00880',
'e_value' => '4e-22',
'bit_score' => '104',
'alignment_length' => '369',
'identity_percentage' => '27.64',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'OL14G01630' => array(
'gene_id' => 'OL14G01630',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'OL14G00970' => array(
'gene_id' => 'OL14G00970',
'e_value' => '5e-22',
'bit_score' => '103',
'alignment_length' => '337',
'identity_percentage' => '28.19',
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'RCC4223.05g03580' => array(
'gene_id' => 'RCC4223.05g03580',
'e_value' => '9e-22',
'bit_score' => '102',
'alignment_length' => '322',
'identity_percentage' => '30.12',
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PI00G28390' => array(
'gene_id' => 'PI00G28390',
'e_value' => '6e-21',
'bit_score' => '100',
'alignment_length' => '498',
'identity_percentage' => '24.70',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068139'
)
),
'MP04G04070' => array(
'gene_id' => 'MP04G04070',
'e_value' => '8e-21',
'bit_score' => '100',
'alignment_length' => '545',
'identity_percentage' => '24.77',
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'ccr74060' => array(
'gene_id' => 'ccr74060',
'e_value' => '2e-19',
'bit_score' => '96.7',
'alignment_length' => '218',
'identity_percentage' => '28.90',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_00039G02190' => array(
'gene_id' => 'ATR_00039G02190',
'e_value' => '2e-19',
'bit_score' => '95.1',
'alignment_length' => '321',
'identity_percentage' => '29.28',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'TP07G04330' => array(
'gene_id' => 'TP07G04330',
'e_value' => '6e-19',
'bit_score' => '94.4',
'alignment_length' => '545',
'identity_percentage' => '22.57',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'TP03G06670' => array(
'gene_id' => 'TP03G06670',
'e_value' => '8e-19',
'bit_score' => '92.8',
'alignment_length' => '280',
'identity_percentage' => '26.43',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P068029'
)
),
'PP00255G00220' => array(
'gene_id' => 'PP00255G00220',
'e_value' => '1e-18',
'bit_score' => '92.4',
'alignment_length' => '391',
'identity_percentage' => '25.32',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PI00G06020' => array(
'gene_id' => 'PI00G06020',
'e_value' => '1e-18',
'bit_score' => '92.0',
'alignment_length' => '323',
'identity_percentage' => '29.41',
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CR01G06680' => array(
'gene_id' => 'CR01G06680',
'e_value' => '2e-18',
'bit_score' => '93.2',
'alignment_length' => '292',
'identity_percentage' => '27.40',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P074290'
)
),
'OS03G22330' => array(
'gene_id' => 'OS03G22330',
'e_value' => '1e-17',
'bit_score' => '89.4',
'alignment_length' => '327',
'identity_percentage' => '27.83',
'species' => 'osa',
'common_name' => 'Oryza sativa',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'YOR386W' => array(
'gene_id' => 'YOR386W',
'e_value' => '1e-17',
'bit_score' => '90.1',
'alignment_length' => '502',
'identity_percentage' => '23.31',
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'OM_05G00230' => array(
'gene_id' => 'OM_05G00230',
'e_value' => '4e-17',
'bit_score' => '89.4',
'alignment_length' => '262',
'identity_percentage' => '28.24',
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'AT2G47590' => array(
'gene_id' => 'AT2G47590',
'e_value' => '5e-17',
'bit_score' => '87.8',
'alignment_length' => '313',
'identity_percentage' => '28.43',
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CR12G11270' => array(
'gene_id' => 'CR12G11270',
'e_value' => '6e-17',
'bit_score' => '87.8',
'alignment_length' => '307',
'identity_percentage' => '28.99',
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'PP00043G00110' => array(
'gene_id' => 'PP00043G00110',
'e_value' => '2e-15',
'bit_score' => '83.2',
'alignment_length' => '364',
'identity_percentage' => '27.75',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'CNC64A_015G01850' => array(
'gene_id' => 'CNC64A_015G01850',
'e_value' => '6e-15',
'bit_score' => '82.0',
'alignment_length' => '283',
'identity_percentage' => '23.32',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P119728'
)
),
'VC00G18140' => array(
'gene_id' => 'VC00G18140',
'e_value' => '3e-14',
'bit_score' => '79.7',
'alignment_length' => '188',
'identity_percentage' => '29.79',
'species' => 'vca',
'common_name' => 'Volvox carteri',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P074290'
)
),
'ccr46120' => array(
'gene_id' => 'ccr46120',
'e_value' => '4e-14',
'bit_score' => '78.6',
'alignment_length' => '325',
'identity_percentage' => '23.69',
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
),
'FC004G07480' => array(
'gene_id' => 'FC004G07480',
'e_value' => '1e-12',
'bit_score' => '74.7',
'alignment_length' => '256',
'identity_percentage' => '26.56',
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'AA0019G00040' => array(
'gene_id' => 'AA0019G00040',
'e_value' => '2e-09',
'bit_score' => '59.3',
'alignment_length' => '72',
'identity_percentage' => '45.83',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P211836'
)
),
'PP00002G01950' => array(
'gene_id' => 'PP00002G01950',
'e_value' => '1e-08',
'bit_score' => '61.6',
'alignment_length' => '76',
'identity_percentage' => '31.58',
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'ATR_02137G00010' => array(
'gene_id' => 'ATR_02137G00010',
'e_value' => '1e-08',
'bit_score' => '58.9',
'alignment_length' => '165',
'identity_percentage' => '29.70',
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P085436'
)
),
'CNC64A_733G00010' => array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
),
'PTI_24G00100' => array(
'gene_id' => 'PTI_24G00100',
'e_value' => '2e-07',
'bit_score' => '58.2',
'alignment_length' => '188',
'identity_percentage' => '27.66',
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P039228'
)
),
'TP08G00290' => array(
'gene_id' => 'TP08G00290',
'e_value' => '2e-07',
'bit_score' => '57.4',
'alignment_length' => '163',
'identity_percentage' => '30.06',
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P012506'
)
),
'AA0014G00030' => array(
'gene_id' => 'AA0014G00030',
'e_value' => '4e-07',
'bit_score' => '54.3',
'alignment_length' => '108',
'identity_percentage' => '37.04',
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P016103'
)
),
'CNC64A_002G03840' => array(
'gene_id' => 'CNC64A_002G03840',
'e_value' => '1e-06',
'bit_score' => '54.7',
'alignment_length' => '296',
'identity_percentage' => '25.68',
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P006503'
)
)
)
$similarity_hits_species = array(
'ath' => array(
(int) 0 => 'AT3G15620',
(int) 1 => 'AT1G04400',
(int) 2 => 'AT5G24850',
(int) 3 => 'AT4G08920',
(int) 4 => 'AT2G47590'
),
'atr' => array(
(int) 0 => 'ATR_00042G00260',
(int) 1 => 'ATR_00148G00690',
(int) 2 => 'ATR_00038G01230',
(int) 3 => 'ATR_00025G01980',
(int) 4 => 'ATR_00039G02190',
(int) 5 => 'ATR_02137G00010'
),
'osa' => array(
(int) 0 => 'OS02G10990',
(int) 1 => 'OS02G41550',
(int) 2 => 'OS06G45100',
(int) 3 => 'OS04G37920',
(int) 4 => 'OS02G36380',
(int) 5 => 'OS03G22330'
),
'ppa' => array(
(int) 0 => 'PP00012G00840',
(int) 1 => 'PP00002G01920',
(int) 2 => 'PP00488G00050',
(int) 3 => 'PP00255G00220',
(int) 4 => 'PP00043G00110',
(int) 5 => 'PP00002G01950'
),
'cvu' => array(
(int) 0 => 'CV00G06480',
(int) 1 => 'CV00G08260',
(int) 2 => 'CV00G05750',
(int) 3 => 'CV00G20060',
(int) 4 => 'CV00G87370',
(int) 5 => 'CV00G49240'
),
'prcc4223' => array(
(int) 0 => 'RCC4223.10g00560',
(int) 1 => 'RCC4223.07g00760',
(int) 2 => 'RCC4223.08g01600',
(int) 3 => 'RCC4223.03g09720',
(int) 4 => 'RCC4223.05g03580'
),
'cnc64a' => array(
(int) 0 => 'CNC64A_031G00590',
(int) 1 => 'CNC64A_008G02490',
(int) 2 => 'CNC64A_015G01850',
(int) 3 => 'CNC64A_002G03840'
),
'pse3' => array(
(int) 0 => 'PI00G34380',
(int) 1 => 'PI00G04790',
(int) 2 => 'PI00G51840',
(int) 3 => 'PI00G28390',
(int) 4 => 'PI00G06020'
),
'cre' => array(
(int) 0 => 'CR06G08080',
(int) 1 => 'CR06G12190',
(int) 2 => 'CR02G01400',
(int) 3 => 'CR01G06680',
(int) 4 => 'CR12G11270'
),
'acg' => array(
(int) 0 => 'AC00G14670',
(int) 1 => 'AC00G11930',
(int) 2 => 'AC00G22630'
),
'mrcc299' => array(
(int) 0 => 'MRCC299_10G03120',
(int) 1 => 'MRCC299_10G00130',
(int) 2 => 'MRCC299_08G04600',
(int) 3 => 'MRCC299_07G02380'
),
'vca' => array(
(int) 0 => 'VC00G69290',
(int) 1 => 'VC00G59430',
(int) 2 => 'VC00G55680',
(int) 3 => 'VC00G55630',
(int) 4 => 'VC00G18140'
),
'ome' => array(
(int) 0 => 'OM_03G00330',
(int) 1 => 'OM_01G00240',
(int) 2 => 'OM_05G00230'
),
'ota' => array(
(int) 0 => 'OT_05G00290',
(int) 1 => 'OT_01G06510',
(int) 2 => 'OT_15G01070'
),
'mpu' => array(
(int) 0 => 'MP09G02830',
(int) 1 => 'MP13G00590',
(int) 2 => 'MP05G02150',
(int) 3 => 'MP04G04070'
),
'mus' => array(
(int) 0 => 'ENSMUSG00000020038',
(int) 1 => 'ENSMUSG00000068742'
),
'hom' => array(
(int) 0 => 'ENSG00000008405'
),
'olu' => array(
(int) 0 => 'OL05G00260',
(int) 1 => 'OL01G06630',
(int) 2 => 'OL14G01630',
(int) 3 => 'OL14G00970'
),
'drm' => array(
(int) 0 => 'FBgn0016054',
(int) 1 => 'FBgn0025680'
),
'orcc809' => array(
(int) 0 => 'ORCC809_05G00280',
(int) 1 => 'ORCC809_01G00210'
),
'nga' => array(
(int) 0 => 'Naga_100161g13',
(int) 1 => 'Naga_100190g4'
),
'gsu' => array(
(int) 0 => 'gsu79870',
(int) 1 => 'gsu109050',
(int) 2 => 'gsu129520',
(int) 3 => 'gsu87130',
(int) 4 => 'gsu126640'
),
'cme' => array(
(int) 0 => 'CM15G03480',
(int) 1 => 'CM10G01320',
(int) 2 => 'CM01G00440',
(int) 3 => 'CM08G02740',
(int) 4 => 'CM13G00750',
(int) 5 => 'CM17G04540',
(int) 6 => 'CM04G01210'
),
'emh' => array(
(int) 0 => 'emh83630',
(int) 1 => 'emh539160',
(int) 2 => 'emh159140',
(int) 3 => 'emh547370',
(int) 4 => 'emh295050',
(int) 5 => 'emh506330',
(int) 6 => 'emh580190',
(int) 7 => 'emh604690'
),
'esi' => array(
(int) 0 => 'ES0194G00110',
(int) 1 => 'ES0002G00990',
(int) 2 => 'ES0002G02030'
),
'bprrcc1105' => array(
(int) 0 => 'BPRRCC1105_03G00300',
(int) 1 => 'BPRRCC1105_14G00970'
),
'ptri' => array(
(int) 0 => 'PTI_08G03200',
(int) 1 => 'PTI_05G04390',
(int) 2 => 'PTI_09G03300',
(int) 3 => 'PTI_06G00880',
(int) 4 => 'PTI_24G00100'
),
'ccr' => array(
(int) 0 => 'ccr31740',
(int) 1 => 'ccr195660',
(int) 2 => 'ccr184840',
(int) 3 => 'ccr74060',
(int) 4 => 'ccr46120'
),
'phs' => array(
(int) 0 => 'phs372210',
(int) 1 => 'phs349220',
(int) 2 => 'phs349300'
),
'aan' => array(
(int) 0 => 'AA0003G05580',
(int) 1 => 'AA0004G04420',
(int) 2 => 'AA0003G01490',
(int) 3 => 'AA0019G00040',
(int) 4 => 'AA0014G00030'
),
'fcy' => array(
(int) 0 => 'FC007G01830',
(int) 1 => 'FC002G07530',
(int) 2 => 'FC006G00170',
(int) 3 => 'FC001G10930',
(int) 4 => 'FC004G07480'
),
'tps' => array(
(int) 0 => 'TP06G00790',
(int) 1 => 'TP06G01280',
(int) 2 => 'TP07G04330',
(int) 3 => 'TP03G06670',
(int) 4 => 'TP08G00290'
),
'apr' => array(
(int) 0 => 'AP00G52620'
),
'sac' => array(
(int) 0 => 'YOR386W'
)
)
$gene_id = 'AT3G15620'
$all_species_index = array(
(int) 0 => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
(int) 1 => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
(int) 2 => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
(int) 3 => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
(int) 4 => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
(int) 5 => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
(int) 6 => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
(int) 7 => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
(int) 8 => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
(int) 9 => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
(int) 10 => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
(int) 11 => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
(int) 12 => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
(int) 13 => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
(int) 14 => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
(int) 15 => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
(int) 16 => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
(int) 17 => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
(int) 18 => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
(int) 19 => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
(int) 20 => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
(int) 21 => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
(int) 22 => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
(int) 23 => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
(int) 24 => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
(int) 25 => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
(int) 26 => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
(int) 27 => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
(int) 28 => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
(int) 29 => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
(int) 30 => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
(int) 31 => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
(int) 32 => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
(int) 33 => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
(int) 34 => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
(int) 35 => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
(int) 36 => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
(int) 37 => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
(int) 38 => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$all_species = array(
'atr' => array(
'species' => 'atr',
'common_name' => 'Amborella trichopoda',
'tax_id' => '13333'
),
'ath' => array(
'species' => 'ath',
'common_name' => 'Arabidopsis thaliana',
'tax_id' => '3702'
),
'acg' => array(
'species' => 'acg',
'common_name' => 'Asterochloris sp. Cgr-DA1pho v2.0',
'tax_id' => '763042'
),
'aan' => array(
'species' => 'aan',
'common_name' => 'Aureococcus anophagefferens',
'tax_id' => '44056'
),
'apr' => array(
'species' => 'apr',
'common_name' => 'Auxenochlorella protothecoides',
'tax_id' => '3075'
),
'bprrcc1105' => array(
'species' => 'bprrcc1105',
'common_name' => 'Bathycoccus prasinos',
'tax_id' => '41875'
),
'cel' => array(
'species' => 'cel',
'common_name' => 'Caenorhabditis elegans',
'tax_id' => '6239'
),
'cre' => array(
'species' => 'cre',
'common_name' => 'Chlamydomonas reinhardtii',
'tax_id' => '3055'
),
'cnc64a' => array(
'species' => 'cnc64a',
'common_name' => 'Chlorella sp NC64A',
'tax_id' => '310507'
),
'ccr' => array(
'species' => 'ccr',
'common_name' => 'Chondrus crispus',
'tax_id' => '2769'
),
'cvu' => array(
'species' => 'cvu',
'common_name' => 'Coccomyxa subellipsoidea C-169',
'tax_id' => '574566'
),
'cme' => array(
'species' => 'cme',
'common_name' => 'Cyanidioschyzon merolae',
'tax_id' => '45157'
),
'ddi' => array(
'species' => 'ddi',
'common_name' => 'Dictyostelium discoideum',
'tax_id' => '44689'
),
'drm' => array(
'species' => 'drm',
'common_name' => 'Drosophila melanogaster',
'tax_id' => '7227'
),
'esi' => array(
'species' => 'esi',
'common_name' => 'Ectocarpus siliculosus',
'tax_id' => '2880'
),
'emh' => array(
'species' => 'emh',
'common_name' => 'Emiliania huxleyi',
'tax_id' => '280463'
),
'fcy' => array(
'species' => 'fcy',
'common_name' => 'Fragilariopsis cylindrus',
'tax_id' => '186039'
),
'gsu' => array(
'species' => 'gsu',
'common_name' => 'Galdieria sulphuraria',
'tax_id' => '130081'
),
'hsp' => array(
'species' => 'hsp',
'common_name' => 'Helicosporidium sp. ',
'tax_id' => '145475'
),
'hom' => array(
'species' => 'hom',
'common_name' => 'Homo sapiens',
'tax_id' => '9606'
),
'mpu' => array(
'species' => 'mpu',
'common_name' => 'Micromonas pusilla strain CCMP1545',
'tax_id' => '564608'
),
'mrcc299' => array(
'species' => 'mrcc299',
'common_name' => 'Micromonas sp RCC299',
'tax_id' => '296587'
),
'mus' => array(
'species' => 'mus',
'common_name' => 'Mus musculus',
'tax_id' => '10090'
),
'nga' => array(
'species' => 'nga',
'common_name' => 'Nannochloropsis gaditana',
'tax_id' => '72520'
),
'osa' => array(
'species' => 'osa',
'common_name' => 'Oryza sativa',
'tax_id' => '4530'
),
'olu' => array(
'species' => 'olu',
'common_name' => 'Ostreococcus lucimarinus',
'tax_id' => '242159'
),
'ome' => array(
'species' => 'ome',
'common_name' => 'Ostreococcus mediterraneus',
'tax_id' => '1486918'
),
'orcc809' => array(
'species' => 'orcc809',
'common_name' => 'Ostreococcus sp RCC809',
'tax_id' => '385169'
),
'ota' => array(
'species' => 'ota',
'common_name' => 'Ostreococcus tauri',
'tax_id' => '70448'
),
'pte' => array(
'species' => 'pte',
'common_name' => 'Paramecium tetraurelia',
'tax_id' => '5888'
),
'ptri' => array(
'species' => 'ptri',
'common_name' => 'Phaeodactylum tricornutum',
'tax_id' => '2850'
),
'ppa' => array(
'species' => 'ppa',
'common_name' => 'Physcomitrella patens',
'tax_id' => '3218'
),
'phs' => array(
'species' => 'phs',
'common_name' => 'Phytophtora sojae',
'tax_id' => '67593'
),
'pse3' => array(
'species' => 'pse3',
'common_name' => 'Picochlorum sp. SENEW3 (SE3)',
'tax_id' => '1470871'
),
'prcc4223' => array(
'species' => 'prcc4223',
'common_name' => 'Picochlorum_RCC4223',
'tax_id' => '249344'
),
'sac' => array(
'species' => 'sac',
'common_name' => 'Saccharomyces cerevisiae strain S288C',
'tax_id' => '4932'
),
'scp' => array(
'species' => 'scp',
'common_name' => 'Schizosaccharomyces pombe',
'tax_id' => '4896'
),
'tps' => array(
'species' => 'tps',
'common_name' => 'Thalassiosira pseudonana',
'tax_id' => '35128'
),
'vca' => array(
'species' => 'vca',
'common_name' => 'Volvox carteri',
'tax_id' => '3067'
)
)
$gene_family_types_information = array(
'HOMFAM' => array(
'id' => 'HOMFAM',
'name' => 'Homologous gene family',
'prefix' => 'HOM',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'homology',
'parent_id' => ''
),
'ORTHOFAM' => array(
'id' => 'ORTHOFAM',
'name' => 'Orthologous gene family',
'prefix' => 'ORTH',
'gene_type' => 'coding',
'method' => '{}',
'ancestry' => 'orthology',
'parent_id' => 'HOMFAM'
)
)
$gene_family_types_configuration = array()
$data_identifier = 'AT3G15620'
$data_type = 'gene_id'
$allow_async_use = true
$gene_placeholder = 'SPAC1F7.10'
$gf_placeholder = 'HOM03P005297'
$title_for_layout = 'Pico-PLAZA 3.0 : Interactive Phylogenetics Module'
$collapse1 = ''
$collapse2 = 'collapse in'
$similarity_hit = array(
'gene_id' => 'CNC64A_733G00010',
'e_value' => '1e-08',
'bit_score' => '57.4',
'alignment_length' => '63',
'identity_percentage' => '38.10',
'gf' => array(
'HOMFAM' => 'HOM03P000246',
'ORTHOFAM' => 'ORTHO03P002930'
)
)
$checked = null
$similarity_hit_gene = 'CNC64A_733G00010'
include - APP/View/Analysis/custom_tree_creation.ctp, line 169
View::_evaluate() - CORE/Cake/View/View.php, line 971
View::_render() - CORE/Cake/View/View.php, line 933
View::render() - CORE/Cake/View/View.php, line 473
Controller::render() - CORE/Cake/Controller/Controller.php, line 963
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167
[main] - APP/webroot/index.php, line 146
|
1e-08 |
57.4 |
63 |
38.10 |