Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G07330	Arabidopsis thaliana	0.0	1406	683	100.00
ATR_00013G02120	Amborella trichopoda	0.0	934	653	73.66
ATR_00019G01680	Amborella trichopoda	0.0	862	688	63.08
ATR_00065G00270	Amborella trichopoda	0.0	853	708	61.72
PP00162G00740	Physcomitrella patens	0.0	846	704	60.51
AT2G24630	Arabidopsis thaliana	0.0	841	688	61.19
AT4G31590	Arabidopsis thaliana	0.0	839	690	62.03
PP00019G01110	Physcomitrella patens	0.0	834	698	60.74
PP00373G00150	Physcomitrella patens	0.0	831	696	60.34
AT3G28180	Arabidopsis thaliana	0.0	816	678	61.06
PP00015G00680	Physcomitrella patens	0.0	807	699	58.23
PP00224G00220	Physcomitrella patens	0.0	805	694	57.20
AT4G07960	Arabidopsis thaliana	0.0	802	699	60.66
PP00164G00010	Physcomitrella patens	0.0	801	693	58.44
OS01G56130	Oryza sativa	0.0	798	594	68.86
OS05G43530	Oryza sativa	0.0	797	601	68.22
PP00089G01080	Physcomitrella patens	0.0	792	697	57.39
OS08G15420	Oryza sativa	0.0	792	751	56.59
OS09G25900	Oryza sativa	0.0	786	588	68.03
OS07G03260	Oryza sativa	0.0	781	590	66.78
OS03G56060	Oryza sativa	0.0	701	463	73.65
PP00065G00990	Physcomitrella patens	6e-146	443	528	42.99
PP00036G01070	Physcomitrella patens	7e-142	432	545	40.92
PP00036G00370	Physcomitrella patens	1e-141	432	541	41.22
ATR_00040G02570	Amborella trichopoda	3e-137	421	529	41.97
AT5G03760	Arabidopsis thaliana	2e-136	418	531	41.81
AT1G23480	Arabidopsis thaliana	2e-136	419	462	45.67
OS02G09930	Oryza sativa	3e-135	415	531	41.05
AT5G22740	Arabidopsis thaliana	1e-134	414	530	40.38
AT1G24070	Arabidopsis thaliana	7e-132	407	544	38.97
OS06G42020	Oryza sativa	2e-130	402	551	39.02
AT4G13410	Arabidopsis thaliana	2e-129	400	527	37.76
OS02G51060	Oryza sativa	2e-128	397	546	39.74
AT2G35650	Arabidopsis thaliana	3e-128	398	439	45.33
OS08G33740	Oryza sativa	1e-126	395	489	41.51
OS07G43710	Oryza sativa	4e-126	393	547	39.12
AT3G56000	Arabidopsis thaliana	8e-126	391	534	40.26
OS03G26044	Oryza sativa	4e-124	388	545	40.55
AT5G16190	Arabidopsis thaliana	1e-123	382	462	41.99
OS03G07350	Oryza sativa	2e-120	377	460	40.65
MRCC299_10G04230	Micromonas sp RCC299	3e-118	369	494	38.87
MP16G01280	Micromonas pusilla strain CCMP1545	7e-116	363	500	40.20
OM_17G00960	Ostreococcus mediterraneus	9e-116	367	529	37.05
OS10G26630	Oryza sativa	2e-114	361	373	46.11
BPRRCC1105_06G01240	Bathycoccus prasinos	3e-112	358	545	37.61
PI00G51280	Picochlorum sp. SENEW3 (SE3)	1e-111	357	424	40.80
CV00G12800	Coccomyxa subellipsoidea C-169	1e-110	352	519	37.38
HE0000G41170	Helicosporidium sp.	4e-110	353	527	36.81
OT_17G00830	Ostreococcus tauri	2e-109	348	433	40.18
RCC4223.04g03450	Picochlorum_RCC4223	3e-109	351	530	35.85
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	2e-108	345	459	38.78
OS06G12460	Oryza sativa	2e-107	345	520	37.50
AP00G21430	Auxenochlorella protothecoides	7e-107	344	459	39.22
ATR_00072G01360	Amborella trichopoda	5e-105	330	309	50.16
CV00G12810	Coccomyxa subellipsoidea C-169	1e-103	330	368	44.29
AT4G16590	Arabidopsis thaliana	7e-103	327	420	40.24
OL16G00900	Ostreococcus lucimarinus	1e-99	322	428	39.02
ORCC809_16G01780	Ostreococcus sp RCC809	2e-94	310	426	38.73
CNC64A_025G01180	Chlorella sp NC64A	9e-87	291	521	33.40
VC00G68920	Volvox carteri	1e-76	263	361	39.89
CR06G04470	Chlamydomonas reinhardtii	5e-75	260	365	40.27
OS09G26770	Oryza sativa	1e-53	197	319	35.74
emh181270	Emiliania huxleyi	9e-49	179	248	43.15
emh488170	Emiliania huxleyi	9e-49	179	248	43.15
OM_13G00450	Ostreococcus mediterraneus	3e-28	125	248	32.26
ATR_00067G00360	Amborella trichopoda	3e-28	115	123	60.16
ORCC809_20G02860	Ostreococcus sp RCC809	5e-28	124	248	32.26
OT_14G02980	Ostreococcus tauri	1e-26	120	304	28.95
OL20G02910	Ostreococcus lucimarinus	4e-26	118	250	33.20
DDB_G0269124	Dictyostelium discoideum	7e-19	95.5	264	30.68
Naga_100049g27	Nannochloropsis gaditana	3e-17	90.1	267	27.72
ES0097G00300	Ectocarpus siliculosus	3e-16	87.0	333	28.53
ES0097G00210	Ectocarpus siliculosus	3e-16	87.0	292	29.79
Naga_100079g22	Nannochloropsis gaditana	2e-15	83.6	258	28.29
OS11G13650	Oryza sativa	5e-15	79.3	140	40.00
ES0185G00090	Ectocarpus siliculosus	1e-14	82.0	329	28.27
ES0200G00060	Ectocarpus siliculosus	2e-14	80.9	273	28.21
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	3e-13	77.0	267	28.84
PI00G46760	Picochlorum sp. SENEW3 (SE3)	3e-12	74.3	219	26.94
OS10G25740	Oryza sativa	1e-11	67.4	81	45.68
RCC4223.10g01020	Picochlorum_RCC4223	2e-11	71.6	219	26.94
PP00372G00370	Physcomitrella patens	3e-11	70.9	251	25.50
emh647580	Emiliania huxleyi	1e-10	68.9	277	26.35
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	1e-09	65.5	196	27.04
CV00G83580	Coccomyxa subellipsoidea C-169	1e-09	65.5	185	29.19
ES0097G00120	Ectocarpus siliculosus	2e-09	65.1	196	32.14
RCC4223.10g00870	Picochlorum_RCC4223	5e-09	63.9	277	24.91
PI00G34600	Picochlorum sp. SENEW3 (SE3)	1e-08	62.4	277	23.47
AP00G07320	Auxenochlorella protothecoides	2e-08	62.4	224	25.00
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	8e-08	60.1	171	27.49
CV00G13860	Coccomyxa subellipsoidea C-169	1e-06	56.2	196	26.02
CV00G28250	Coccomyxa subellipsoidea C-169	1e-06	55.8	198	25.76
AC00G61190	Asterochloris sp. Cgr-DA1pho v2.0	4e-06	54.3	208	24.52
CV00G01670	Coccomyxa subellipsoidea C-169	4e-06	54.3	184	25.54
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	1e-05	53.1	224	24.11

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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