Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT2G47710	Arabidopsis thaliana	4e-115	330	163	100.00
ATR_00045G03170	Amborella trichopoda	3e-66	206	156	62.18
OS12G36640	Oryza sativa	1e-65	204	160	63.75
OS07G47620	Oryza sativa	1e-61	194	158	62.66
OS12G36630	Oryza sativa	3e-60	191	154	61.04
ATR_00016G03410	Amborella trichopoda	6e-60	190	153	57.52
AT5G49050	Arabidopsis thaliana	2e-32	119	119	48.74
ATR_00079G00520	Amborella trichopoda	9e-32	117	162	38.89
ATR_00003G00120	Amborella trichopoda	4e-31	115	153	40.52
OS10G30150	Oryza sativa	2e-26	103	165	39.39
AT3G11930	Arabidopsis thaliana	1e-24	100	189	33.33
OS03G53900	Oryza sativa	7e-23	94.7	165	38.18
AT3G58450	Arabidopsis thaliana	1e-22	94.7	162	33.33
AT1G09740	Arabidopsis thaliana	4e-22	92.4	160	36.88
OS01G19820	Oryza sativa	1e-21	91.3	154	38.31
AT3G62550	Arabidopsis thaliana	2e-21	90.5	160	38.75
OS05G28740	Oryza sativa	1e-20	89.0	157	35.67
OS01G32780	Oryza sativa	7e-20	86.3	167	33.53
OS03G19270	Oryza sativa	1e-19	86.7	176	34.66
ATR_00003G00130	Amborella trichopoda	2e-19	83.6	90	48.89
OS02G52314	Oryza sativa	3e-19	84.7	167	33.53
OS03G22390	Oryza sativa	1e-18	82.8	151	40.40
ATR_00135G00050	Amborella trichopoda	3e-18	82.4	155	36.13
AT1G68300	Arabidopsis thaliana	1e-15	74.7	158	32.28
ATR_00105G00370	Amborella trichopoda	6e-15	72.4	137	30.66
PP00007G02290	Physcomitrella patens	8e-14	70.1	158	27.85
ATR_00165G00230	Amborella trichopoda	1e-13	68.9	161	31.06
OS02G53320	Oryza sativa	3e-13	67.8	164	28.66
PP00098G01150	Physcomitrella patens	4e-12	65.5	166	27.11
PP00336G00330	Physcomitrella patens	7e-12	65.9	159	29.56
ATR_00045G01790	Amborella trichopoda	7e-11	61.2	156	27.56
ATR_00058G02030	Amborella trichopoda	7e-11	61.2	144	29.17
PP00001G01620	Physcomitrella patens	7e-11	61.2	155	28.39
OS05G06500	Oryza sativa	1e-10	60.5	152	30.26
PP00034G01480	Physcomitrella patens	1e-10	63.5	164	26.22
AT1G11360	Arabidopsis thaliana	3e-10	60.1	164	26.83
PP00171G00550	Physcomitrella patens	5e-10	59.3	162	27.16
CR12G16810	Chlamydomonas reinhardtii	1e-09	57.4	160	32.50
ATR_00085G00590	Amborella trichopoda	1e-09	57.4	70	40.00
AT3G01520	Arabidopsis thaliana	2e-09	57.0	144	26.39
PP00304G00100	Physcomitrella patens	6e-09	56.2	144	26.39
PP00062G00920	Physcomitrella patens	7e-09	55.5	170	29.41
OS01G63010	Oryza sativa	8e-09	55.1	166	26.51
PP00400G00060	Physcomitrella patens	1e-08	54.7	165	26.67
PP00447G00080	Physcomitrella patens	1e-08	55.1	144	26.39
CV00G92270	Coccomyxa subellipsoidea C-169	2e-08	53.5	169	23.08
OS02G47840	Oryza sativa	3e-08	53.9	55	36.36
VC00G96740	Volvox carteri	3e-08	53.1	163	25.15
AT3G53990	Arabidopsis thaliana	7e-08	52.4	155	25.81
CR16G01750	Chlamydomonas reinhardtii	2e-07	50.8	163	25.15
AT5G14680	Arabidopsis thaliana	5e-07	50.4	147	25.85
OS05G07810	Oryza sativa	6e-07	50.8	167	28.74
AC00G12530	Asterochloris sp. Cgr-DA1pho v2.0	6e-07	49.7	138	24.64
CNC64A_017G01310	Chlorella sp NC64A	9e-07	50.4	159	25.79
CV00G47340	Coccomyxa subellipsoidea C-169	1e-06	49.3	151	26.49
VC00G35010	Volvox carteri	3e-06	49.3	170	29.41
AT3G17020	Arabidopsis thaliana	3e-06	48.1	59	33.90
MP03G02550	Micromonas pusilla strain CCMP1545	5e-06	48.1	166	23.49
AT4G27320	Arabidopsis thaliana	8e-06	48.1	159	28.30

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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