Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT2G32610	Arabidopsis thaliana	0.0	1568	758	100.00
AT2G32530	Arabidopsis thaliana	0.0	1193	758	76.39
AT2G32620	Arabidopsis thaliana	0.0	1183	758	78.36
AT2G32540	Arabidopsis thaliana	0.0	1123	758	73.75
AT4G15290	Arabidopsis thaliana	0.0	1117	757	74.37
AT4G15320	Arabidopsis thaliana	0.0	956	811	62.15
ATR_00017G00080	Amborella trichopoda	3e-170	513	700	40.86
OS10G20090	Oryza sativa	6e-170	515	734	40.05
ATR_00017G01730	Amborella trichopoda	9e-159	486	777	39.12
OS04G35020	Oryza sativa	4e-129	409	738	35.37
ATR_00081G00760	Amborella trichopoda	4e-121	396	803	32.50
AT2G25540	Arabidopsis thaliana	5e-121	395	802	31.92
OS05G08370	Oryza sativa	2e-120	394	798	32.21
AT4G32410	Arabidopsis thaliana	2e-119	391	809	32.01
OS03G59340	Oryza sativa	7e-119	390	784	31.89
AT5G05170	Arabidopsis thaliana	4e-118	387	830	31.45
OS07G10770	Oryza sativa	6e-118	387	806	31.89
OS01G54620	Oryza sativa	2e-117	384	804	31.72
OS09G25490	Oryza sativa	8e-117	384	793	31.90
ATR_00103G00760	Amborella trichopoda	2e-115	381	832	30.41
AT5G17420	Arabidopsis thaliana	1e-113	375	796	31.28
AT4G18780	Arabidopsis thaliana	2e-113	374	815	31.66
AT5G09870	Arabidopsis thaliana	8e-113	374	812	31.90
ATR_00170G00010	Amborella trichopoda	8e-112	367	816	31.25
AT4G39350	Arabidopsis thaliana	1e-110	368	806	31.64
ATR_00137G00140	Amborella trichopoda	1e-110	367	816	31.00
AT2G21770	Arabidopsis thaliana	1e-110	368	805	31.93
ATR_00045G01550	Amborella trichopoda	2e-110	367	793	31.02
ATR_00061G02350	Amborella trichopoda	4e-109	355	786	31.17
PP00030G00170	Physcomitrella patens	3e-108	361	822	30.90
PP00213G00010	Physcomitrella patens	7e-108	358	816	30.88
OS09G30130	Oryza sativa	4e-105	345	736	31.39
OS09G30120	Oryza sativa	5e-105	345	739	30.45
AT1G55850	Arabidopsis thaliana	1e-104	343	642	35.83
ATR_00017G02090	Amborella trichopoda	3e-104	350	809	30.16
ATR_00002G02960	Amborella trichopoda	4e-101	333	627	32.38
PP00269G00120	Physcomitrella patens	1e-100	342	889	30.60
PP00111G00250	Physcomitrella patens	8e-100	340	891	30.53
PP00243G00010	Physcomitrella patens	3e-98	335	893	30.91
PP00068G00840	Physcomitrella patens	4e-98	335	876	30.37
AT4G38190	Arabidopsis thaliana	6e-98	333	854	30.21
PP00057G00480	Physcomitrella patens	6e-97	332	884	30.32
OS06G02180	Oryza sativa	6e-96	329	858	30.89
PP00310G00070	Physcomitrella patens	2e-95	327	886	30.02
ATR_00048G00590	Amborella trichopoda	1e-94	325	876	30.02
PP00243G00060	Physcomitrella patens	1e-93	322	864	30.56
PP00111G00180	Physcomitrella patens	2e-93	322	865	30.52
OS10G42750	Oryza sativa	2e-92	318	873	29.55
AT3G03050	Arabidopsis thaliana	3e-92	318	858	30.19
AT5G16910	Arabidopsis thaliana	5e-92	318	855	30.53
AT1G32180	Arabidopsis thaliana	1e-91	314	870	30.11
AT4G23990	Arabidopsis thaliana	2e-90	306	647	31.99
ATR_00022G01210	Amborella trichopoda	3e-90	313	846	30.14
AT4G24000	Arabidopsis thaliana	4e-88	299	677	30.87
AT1G02730	Arabidopsis thaliana	4e-88	306	869	28.88
AT2G33100	Arabidopsis thaliana	1e-87	303	864	28.36
OS02G49332	Oryza sativa	6e-87	296	730	29.59
OS10G20260	Oryza sativa	6e-87	298	606	32.51
AT4G24010	Arabidopsis thaliana	1e-86	296	675	30.52
OS08G25710	Oryza sativa	7e-86	300	708	30.65
ATR_00021G02120	Amborella trichopoda	8e-86	293	646	33.59
OS07G36610	Oryza sativa	3e-85	295	791	28.45
OS07G36700	Oryza sativa	2e-84	292	698	29.66
OS07G36630	Oryza sativa	3e-84	292	770	27.79
ATR_00019G03800	Amborella trichopoda	1e-83	293	864	28.82
OS07G36690	Oryza sativa	2e-83	290	681	30.25
OS06G22980	Oryza sativa	2e-83	291	879	28.21
OS07G36740	Oryza sativa	7e-83	288	694	30.40
OS07G36750	Oryza sativa	7e-79	277	799	27.91
OS08G06380	Oryza sativa	6e-76	270	718	27.99
AT5G44030	Arabidopsis thaliana	1e-74	267	368	38.86
ATR_00022G00640	Amborella trichopoda	2e-74	266	368	38.86
OS07G24190	Oryza sativa	7e-74	265	368	39.40
OS07G14850	Oryza sativa	7e-74	265	368	39.13
OS03G62090	Oryza sativa	1e-73	264	368	39.40
ATR_00067G02090	Amborella trichopoda	4e-73	262	368	38.86
PP00112G00250	Physcomitrella patens	3e-72	260	373	38.34
PP00090G01250	Physcomitrella patens	8e-72	259	370	37.84
AT5G64740	Arabidopsis thaliana	1e-71	258	374	38.77
PP00008G00780	Physcomitrella patens	1e-71	255	373	38.07
OS10G32980	Oryza sativa	2e-71	257	379	37.47
PP00029G01150	Physcomitrella patens	5e-70	253	370	37.03
ATR_00017G00110	Amborella trichopoda	2e-69	244	261	45.98
PP00189G00480	Physcomitrella patens	9e-63	226	583	29.33
PP00189G00510	Physcomitrella patens	9e-63	226	583	29.33
OS04G35030	Oryza sativa	2e-60	215	233	47.21
OS06G39970	Oryza sativa	5e-58	216	384	34.90
ATR_00061G02330	Amborella trichopoda	3e-57	209	423	33.10
ATR_00057G00940	Amborella trichopoda	2e-55	206	581	28.57
OS12G36890	Oryza sativa	1e-53	205	456	31.36
PP00059G01570	Physcomitrella patens	5e-40	159	475	28.00
ATR_00057G00930	Amborella trichopoda	9e-28	122	184	40.22
ATR_00061G02320	Amborella trichopoda	1e-16	81.6	65	53.85
OS12G29300	Oryza sativa	1e-15	82.0	144	31.94
PP00059G01580	Physcomitrella patens	1e-15	81.6	134	33.58
PP00015G00170	Physcomitrella patens	1e-14	76.6	89	42.70
OS09G30105	Oryza sativa	2e-14	79.0	125	36.00
PP00120G00840	Physcomitrella patens	2e-12	70.1	91	35.16
ATR_00067G02080	Amborella trichopoda	8e-08	56.6	49	48.98
Naga_100079g22	Nannochloropsis gaditana	3e-07	57.8	196	26.02

External Sequences (optional)

External Sequences Type

Program Settings

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