Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT2G29890	Arabidopsis thaliana	0.0	1937	934	100.00
ATR_00029G03990	Amborella trichopoda	0.0	941	945	51.22
ATR_00019G03480	Amborella trichopoda	0.0	831	978	46.01
AT5G57320	Arabidopsis thaliana	0.0	793	963	42.89
AT4G30160	Arabidopsis thaliana	0.0	791	989	44.19
OS04G51440	Oryza sativa	0.0	775	955	43.66
OS05G06110	Oryza sativa	0.0	753	737	49.12
OS06G44890	Oryza sativa	0.0	749	821	47.14
ATR_00025G04050	Amborella trichopoda	0.0	622	965	36.99
AT3G57410	Arabidopsis thaliana	0.0	615	758	42.74
AT2G41740	Arabidopsis thaliana	0.0	602	898	38.98
OS08G14230	Oryza sativa	0.0	581	643	47.59
PP00100G00130	Physcomitrella patens	0.0	587	962	35.03
PP00299G00050	Physcomitrella patens	0.0	580	1001	34.67
PP00020G00410	Physcomitrella patens	0.0	557	945	34.60
OS03G24220	Oryza sativa	2e-161	494	638	40.60
phs187620	Phytophtora sojae	3e-119	392	966	29.50
emh397080	Emiliania huxleyi	1e-98	335	743	29.74
ENSG00000135407	Homo sapiens	5e-97	330	737	30.53
ENSG00000148180	Homo sapiens	2e-94	322	740	29.73
ENSMUSG00000002565	Mus musculus	4e-94	319	731	29.27
ENSG00000006747	Homo sapiens	2e-92	315	731	29.27
ENSMUSG00000026879	Mus musculus	5e-92	315	737	28.90
ENSMUSG00000025432	Mus musculus	2e-89	308	761	29.17
ENSG00000127831	Homo sapiens	2e-87	303	835	28.38
MRCC299_16G00860	Micromonas sp RCC299	2e-82	292	773	28.72
ES0234G00020	Ectocarpus siliculosus	2e-82	288	769	28.87
Naga_100078g6	Nannochloropsis gaditana	9e-79	281	800	28.62
ENSG00000136059	Homo sapiens	2e-77	276	741	27.80
FBgn0010225	Drosophila melanogaster	6e-75	268	743	28.94
DDB_G0276453	Dictyostelium discoideum	9e-64	236	806	27.42
DDB_G0288557	Dictyostelium discoideum	2e-52	204	611	26.35
DDB_G0282725	Dictyostelium discoideum	1e-51	201	623	27.61
CR12G13840	Chlamydomonas reinhardtii	8e-45	178	781	26.38
DDB_G0289327	Dictyostelium discoideum	5e-44	168	340	31.76
DDB_G0271058	Dictyostelium discoideum	5e-40	165	634	25.55
WBGene00010593	Caenorhabditis elegans	1e-37	152	494	25.91
TP06G01190	Thalassiosira pseudonana	2e-34	140	352	29.55
VC00G19130	Volvox carteri	4e-34	145	758	23.88
FBgn0000709	Drosophila melanogaster	5e-34	145	741	22.27
emh704000	Emiliania huxleyi	1e-31	133	348	26.44
emh154230	Emiliania huxleyi	1e-31	133	348	26.44
PTI_04G04220	Phaeodactylum tricornutum	1e-31	133	356	26.12
emh403020	Emiliania huxleyi	1e-30	130	363	25.34
emh184940	Emiliania huxleyi	1e-30	130	363	25.34
emh363800	Emiliania huxleyi	4e-30	127	339	30.09
ENSG00000042493	Homo sapiens	5e-30	127	351	26.78
CV00G92530	Coccomyxa subellipsoidea C-169	2e-29	123	231	33.33
FBgn0003187	Drosophila melanogaster	8e-26	118	637	22.45
PTI_01G05030	Phaeodactylum tricornutum	5e-25	113	391	24.55
WBGene00001443	Caenorhabditis elegans	6e-24	113	733	23.19
ccr125580	Chondrus crispus	3e-23	107	306	29.74
FC022G02270	Fragilariopsis cylindrus	1e-20	99.0	371	24.26
MP09G04410	Micromonas pusilla strain CCMP1545	3e-17	90.9	255	27.45
AA0001G05200	Aureococcus anophagefferens	6e-17	86.3	191	29.84
AA0258G00030	Aureococcus anophagefferens	6e-17	86.3	191	29.84
ENSMUSG00000024236	Mus musculus	3e-16	88.6	704	23.58
DDB_G0291536	Dictyostelium discoideum	3e-14	81.6	724	20.86
ENSG00000197321	Homo sapiens	3e-14	81.6	703	22.62
PP00105G00200	Physcomitrella patens	2e-12	71.6	60	53.33
FBgn0266696	Drosophila melanogaster	1e-07	60.5	655	20.46
emh23860	Emiliania huxleyi	1e-07	56.2	63	33.33

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment