Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G75040	Arabidopsis thaliana	3e-175	489	240	100.00
AT1G75050	Arabidopsis thaliana	7e-128	369	243	74.90
AT1G75030	Arabidopsis thaliana	8e-121	351	243	71.60
AT1G19320	Arabidopsis thaliana	2e-102	304	246	63.01
ATR_00059G01310	Amborella trichopoda	3e-87	265	238	57.56
OS03G13070	Oryza sativa	2e-83	256	249	56.63
OS08G43510	Oryza sativa	5e-82	255	239	55.23
ATR_00010G00640	Amborella trichopoda	2e-81	251	221	59.73
PP00113G00370	Physcomitrella patens	2e-81	251	241	53.94
PP00412G00060	Physcomitrella patens	2e-81	253	217	58.06
AT4G38660	Arabidopsis thaliana	7e-81	253	239	54.81
ATR_00041G01130	Amborella trichopoda	4e-78	245	236	54.24
PP00081G00070	Physcomitrella patens	1e-77	241	239	55.23
AT1G73620	Arabidopsis thaliana	1e-77	241	222	58.11
ATR_00022G02950	Amborella trichopoda	2e-77	240	236	55.08
AT1G18250	Arabidopsis thaliana	2e-76	238	225	56.89
OS10G05660	Oryza sativa	3e-76	240	249	53.01
OS04G59370	Oryza sativa	1e-75	237	217	56.22
AT1G75800	Arabidopsis thaliana	1e-75	239	244	52.46
AT5G24620	Arabidopsis thaliana	2e-75	241	251	52.59
OS06G47600	Oryza sativa	2e-75	236	239	53.97
ATR_00017G01220	Amborella trichopoda	3e-75	238	242	51.24
AT4G24180	Arabidopsis thaliana	4e-75	235	253	51.78
ATR_00025G01950	Amborella trichopoda	5e-75	234	220	56.36
AT1G20030	Arabidopsis thaliana	1e-74	236	229	55.90
AT1G77700	Arabidopsis thaliana	2e-74	236	217	52.53
AT2G17860	Arabidopsis thaliana	9e-74	231	250	51.60
OS09G36580	Oryza sativa	2e-73	232	242	52.89
OS09G32280	Oryza sativa	3e-72	230	222	56.76
AT4G36010	Arabidopsis thaliana	3e-72	229	231	55.41
OS03G14050	Oryza sativa	4e-72	229	241	55.19
ATR_00017G01200	Amborella trichopoda	7e-72	225	219	54.34
AT4G38670	Arabidopsis thaliana	4e-68	218	242	50.83
OS09G36560	Oryza sativa	8e-68	218	248	52.82
OS03G14030	Oryza sativa	8e-67	216	251	51.79
OS10G05600	Oryza sativa	6e-65	213	259	49.03
ATR_00041G01140	Amborella trichopoda	7e-65	209	195	60.00
WBGene00009215	Caenorhabditis elegans	7e-63	202	218	53.67
WBGene00021999	Caenorhabditis elegans	8e-63	202	238	49.16
WBGene00009858	Caenorhabditis elegans	8e-62	200	235	49.79
WBGene00009213	Caenorhabditis elegans	2e-61	199	218	52.75
AT5G38280	Arabidopsis thaliana	5e-61	208	247	46.15
OS06G50240	Oryza sativa	2e-60	199	245	49.39
AT5G40020	Arabidopsis thaliana	4e-60	196	247	43.32
OS08G40600	Oryza sativa	5e-59	197	262	49.24
OS07G23470	Oryza sativa	2e-58	192	229	48.91
ATR_00012G02540	Amborella trichopoda	3e-58	191	238	43.28
OS11G47944	Oryza sativa	1e-57	190	241	45.64
AT4G11650	Arabidopsis thaliana	1e-56	187	241	44.81
OS03G46070	Oryza sativa	5e-56	185	220	48.64
AT5G02140	Arabidopsis thaliana	1e-55	186	237	43.46
OS07G23730	Oryza sativa	3e-55	184	263	44.49
AT2G28790	Arabidopsis thaliana	1e-54	182	240	43.33
ATR_00002G02940	Amborella trichopoda	2e-54	180	198	47.98
OS10G27280	Oryza sativa	9e-54	181	237	45.99
OS03G45960	Oryza sativa	2e-53	178	245	43.67
OS12G43490	Oryza sativa	7e-53	178	223	47.98
ATR_00032G00180	Amborella trichopoda	1e-51	174	227	45.81
OS12G43450	Oryza sativa	1e-51	174	227	45.81
ATR_00012G00940	Amborella trichopoda	2e-51	173	219	43.84
OS01G62260	Oryza sativa	4e-49	168	219	43.84
AT4G36000	Arabidopsis thaliana	4e-48	164	144	57.64
AT1G70250	Arabidopsis thaliana	2e-46	169	229	39.74
WBGene00021992	Caenorhabditis elegans	4e-46	159	240	38.33
OS01G02310	Oryza sativa	1e-43	160	223	46.19
AT4G18250	Arabidopsis thaliana	5e-41	154	222	40.54
ATR_00124G00200	Amborella trichopoda	7e-37	135	223	37.22
OS03G46060	Oryza sativa	6e-36	132	222	40.99
ATR_00032G00190	Amborella trichopoda	4e-35	130	245	37.55
ATR_00032G00170	Amborella trichopoda	8e-31	119	148	43.24
AT2G24810	Arabidopsis thaliana	8e-28	110	78	66.67
OS02G02200	Oryza sativa	2e-26	107	107	57.94
OS12G43440	Oryza sativa	4e-26	105	124	51.61
OS12G43380	Oryza sativa	4e-25	102	150	44.00
OS12G43430	Oryza sativa	4e-25	102	150	44.00
OS12G43390	Oryza sativa	6e-25	102	154	44.16
OS12G38120	Oryza sativa	3e-20	90.9	217	32.72
OS11G47680	Oryza sativa	5e-20	89.4	220	33.64
ATR_00051G01020	Amborella trichopoda	2e-17	79.7	90	47.78
OS07G04730	Oryza sativa	2e-16	82.4	100	49.00
PP00026G00760	Physcomitrella patens	2e-14	73.6	140	37.86
OS11G47670	Oryza sativa	2e-13	70.5	177	32.20
OS12G38170	Oryza sativa	2e-13	70.5	164	34.76
OS12G43410	Oryza sativa	2e-11	63.5	169	32.54
OS12G38150	Oryza sativa	2e-11	64.7	146	35.62
CR02G07660	Chlamydomonas reinhardtii	5e-10	61.2	142	35.21
PP00302G00170	Physcomitrella patens	2e-09	58.9	186	32.80
OS06G19250	Oryza sativa	9e-08	55.1	57	50.88
OS08G29320	Oryza sativa	1e-07	52.8	42	54.76
ES0212G00280	Ectocarpus siliculosus	7e-07	53.5	106	37.74
OS01G12150	Oryza sativa	2e-06	50.1	48	56.25
OS10G38100	Oryza sativa	5e-06	49.7	73	49.32

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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