Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G73370	Arabidopsis thaliana	0.0	1960	943	100.00
ATR_00044G00210	Amborella trichopoda	0.0	1211	809	67.99
OS04G24430	Oryza sativa	0.0	1189	811	66.83
OS02G58480	Oryza sativa	0.0	1159	844	64.81
AT5G37180	Arabidopsis thaliana	0.0	1144	806	67.25
OS04G17650	Oryza sativa	0.0	1124	780	67.18
ATR_00106G00050	Amborella trichopoda	0.0	993	807	57.62
AT4G02280	Arabidopsis thaliana	0.0	957	799	56.45
OS03G22120	Oryza sativa	0.0	949	805	55.40
OS06G09450	Oryza sativa	0.0	939	806	55.71
AT5G49190	Arabidopsis thaliana	0.0	932	803	54.79
OS03G28330	Oryza sativa	0.0	918	807	54.28
AT5G20830	Arabidopsis thaliana	0.0	912	812	55.05
AT3G43190	Arabidopsis thaliana	0.0	912	812	54.31
OS07G42490	Oryza sativa	0.0	899	808	53.22
PP00028G02030	Physcomitrella patens	0.0	896	813	51.54
PP00093G00500	Physcomitrella patens	0.0	888	810	52.47
PP00303G00240	Physcomitrella patens	0.0	887	810	51.98
PP00120G00370	Physcomitrella patens	0.0	883	797	52.07
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	791	729	51.99
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	785	825	47.27
RCC4223.04g06590	Picochlorum_RCC4223	0.0	772	825	46.91
HE0000G56330	Helicosporidium sp.	0.0	752	806	48.14
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	642	775	43.35
CNC64A_002G04500	Chlorella sp NC64A	0.0	638	735	45.17
AP00G37470	Auxenochlorella protothecoides	0.0	559	509	52.85
AP00G37480	Auxenochlorella protothecoides	2e-88	296	401	40.15
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	3e-40	162	525	27.81
OS01G69030	Oryza sativa	3e-39	162	526	29.28
PP00066G01210	Physcomitrella patens	3e-38	158	534	26.78
OS08G20660	Oryza sativa	5e-38	158	535	27.10
PP00131G00600	Physcomitrella patens	2e-37	156	533	26.64
ATR_00033G01740	Amborella trichopoda	2e-37	156	530	29.06
OS02G09170	Oryza sativa	1e-36	154	545	26.06
ATR_00099G00850	Amborella trichopoda	1e-36	154	520	27.12
PI00G14670	Picochlorum sp. SENEW3 (SE3)	1e-36	154	578	26.82
AT4G10120	Arabidopsis thaliana	2e-36	153	527	26.94
AT5G11110	Arabidopsis thaliana	3e-36	152	547	26.69
OS06G43630	Oryza sativa	3e-35	149	538	26.95
AT5G20280	Arabidopsis thaliana	4e-35	149	543	26.52
AT1G04920	Arabidopsis thaliana	7e-35	148	578	25.61
gsu138950	Galdieria sulphuraria	3e-34	145	497	26.36
OS11G12810	Oryza sativa	6e-32	139	530	25.85
AP00G64190	Auxenochlorella protothecoides	4e-28	126	570	23.86
CNC64A_014G03230	Chlorella sp NC64A	1e-26	120	200	36.00
RCC4223.05g02250	Picochlorum_RCC4223	4e-26	120	274	32.12
HE0000G57540	Helicosporidium sp.	2e-22	106	197	32.49
CR12G08850	Chlamydomonas reinhardtii	3e-22	107	202	33.17
CV00G68630	Coccomyxa subellipsoidea C-169	1e-20	102	335	28.36
CM20G01680	Cyanidioschyzon merolae	4e-11	70.5	236	22.88
CV00G77080	Coccomyxa subellipsoidea C-169	1e-08	62.4	149	30.20
DDB_G0272730	Dictyostelium discoideum	3e-08	61.2	157	25.48
CNC64A_003G02590	Chlorella sp NC64A	9e-08	59.7	148	27.70
RCC4223.03g02920	Picochlorum_RCC4223	4e-07	57.4	112	33.04
gsu17350	Galdieria sulphuraria	5e-07	57.0	184	26.63
CR02G06020	Chlamydomonas reinhardtii	1e-06	55.8	108	35.19
PI00G54090	Picochlorum sp. SENEW3 (SE3)	6e-06	53.9	145	29.66

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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