Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G43620	Arabidopsis thaliana	0.0	1272	616	100.00
ATR_00040G00350	Amborella trichopoda	0.0	804	568	69.19
OS01G64750	Oryza sativa	0.0	727	525	68.00
OS04G04254	Oryza sativa	0.0	615	535	55.70
AT3G07020	Arabidopsis thaliana	0.0	608	498	56.63
PP00245G00310	Physcomitrella patens	0.0	610	509	57.56
PP00159G00310	Physcomitrella patens	0.0	595	577	54.07
PP00281G00140	Physcomitrella patens	0.0	601	497	59.36
PP00090G00650	Physcomitrella patens	0.0	598	489	56.44
ATR_00039G01530	Amborella trichopoda	0.0	579	495	56.77
OS07G23740	Oryza sativa	0.0	580	543	52.85
PP00110G00380	Physcomitrella patens	0.0	576	427	63.00
AC00G94040	Asterochloris sp. Cgr-DA1pho v2.0	2e-145	436	426	48.59
phs167020	Phytophtora sojae	5e-120	395	446	47.76
phs98350	Phytophtora sojae	3e-118	394	503	42.74
phs72690	Phytophtora sojae	3e-117	387	469	43.07
phs72670	Phytophtora sojae	8e-115	385	485	44.74
Naga_100022g16	Nannochloropsis gaditana	6e-111	369	460	42.61
OS04G04240	Oryza sativa	2e-106	332	271	55.72
AA0004G01710	Aureococcus anophagefferens	5e-100	320	450	41.56
PTI_17G01510	Phaeodactylum tricornutum	1e-96	322	438	41.32
FC004G08680	Fragilariopsis cylindrus	5e-96	311	457	39.17
phs99410	Phytophtora sojae	2e-90	307	438	38.13
phs99390	Phytophtora sojae	1e-89	294	350	44.86
DDB_G0288655	Dictyostelium discoideum	1e-75	270	461	33.84
phs166940	Phytophtora sojae	9e-75	268	405	40.00
YLR189C	Saccharomyces cerevisiae strain S288C	2e-69	249	432	33.10
phs08490	Phytophtora sojae	2e-60	210	249	46.18
AA0005G00200	Aureococcus anophagefferens	3e-50	181	287	38.33
CV00G63620	Coccomyxa subellipsoidea C-169	2e-47	170	191	47.12
emh763250	Emiliania huxleyi	2e-47	178	468	31.20
CR07G05220	Chlamydomonas reinhardtii	4e-41	162	393	32.57
FC001G15770	Fragilariopsis cylindrus	1e-27	114	161	39.13
AA0059G00270	Aureococcus anophagefferens	1e-25	111	185	35.14
emh330090	Emiliania huxleyi	6e-24	108	411	25.30
emh621080	Emiliania huxleyi	6e-23	102	220	28.64
emh620950	Emiliania huxleyi	6e-23	102	220	28.64
FC001G15590	Fragilariopsis cylindrus	6e-22	101	183	33.88
ccr112280	Chondrus crispus	7e-22	103	484	24.38
TP15G02210	Thalassiosira pseudonana	7e-22	100	115	40.87
Naga_100051g35	Nannochloropsis gaditana	1e-20	100	522	24.33
DDB_G0268544	Dictyostelium discoideum	7e-20	96.7	445	22.25
DDB_G0268540	Dictyostelium discoideum	1e-19	95.5	443	23.25
OS02G11940	Oryza sativa	5e-19	94.0	318	24.84
emh420080	Emiliania huxleyi	2e-18	90.1	170	34.12
AT5G24750	Arabidopsis thaliana	8e-18	90.9	506	21.15
CNC64A_006G03170	Chlorella sp NC64A	1e-17	90.5	117	43.59
VC00G90020	Volvox carteri	2e-16	83.6	76	47.37
ATR_00078G01500	Amborella trichopoda	1e-15	84.0	197	27.41
ccr80920	Chondrus crispus	3e-15	82.8	497	22.94
phs99370	Phytophtora sojae	7e-15	81.6	269	29.00
ccr05920	Chondrus crispus	2e-14	80.1	497	22.94
PP00131G00380	Physcomitrella patens	1e-13	78.2	112	37.50
ES0029G00120	Ectocarpus siliculosus	3e-12	73.9	233	27.47
MP09G01500	Micromonas pusilla strain CCMP1545	8e-12	72.4	498	23.90
AA0006G05280	Aureococcus anophagefferens	2e-11	71.2	113	37.17
emh190260	Emiliania huxleyi	2e-11	70.9	562	21.53
CR07G01230	Chlamydomonas reinhardtii	2e-09	64.7	59	47.46
phs166980	Phytophtora sojae	3e-09	63.2	243	26.34
AP00G02630	Auxenochlorella protothecoides	2e-08	60.8	250	24.80
phs217180	Phytophtora sojae	6e-08	58.5	152	31.58
emh600660	Emiliania huxleyi	3e-07	56.6	313	23.64
FBgn0027074	Drosophila melanogaster	8e-07	55.8	144	23.61

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment