Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G27280	Arabidopsis thaliana	2e-166	465	226	100.00
AT1G24230	Arabidopsis thaliana	1e-51	174	205	46.34
AT1G27260	Arabidopsis thaliana	2e-44	154	213	42.25
AT1G23810	Arabidopsis thaliana	5e-36	133	217	38.71
AT1G24250	Arabidopsis thaliana	2e-35	131	225	37.33
AT1G27270	Arabidopsis thaliana	3e-30	117	219	39.27
PP00212G00120	Physcomitrella patens	2e-26	112	150	40.00
AT1G27240	Arabidopsis thaliana	7e-26	104	159	43.40
AT1G24190	Arabidopsis thaliana	1e-25	110	137	41.61
ATR_00090G01090	Amborella trichopoda	7e-25	108	154	38.96
AT1G70060	Arabidopsis thaliana	4e-24	105	142	41.55
AT1G24200	Arabidopsis thaliana	4e-24	100	137	40.88
PP00178G00660	Physcomitrella patens	6e-24	101	150	40.67
PP00101G00880	Physcomitrella patens	1e-23	104	137	40.15
AT1G24210	Arabidopsis thaliana	4e-23	96.7	139	41.01
PP00403G00290	Physcomitrella patens	4e-23	102	152	36.84
PP00363G00060	Physcomitrella patens	1e-21	99.0	137	38.69
AT3G01320	Arabidopsis thaliana	2e-21	98.2	160	35.62
AT5G15020	Arabidopsis thaliana	3e-20	94.7	137	39.42
AT1G10450	Arabidopsis thaliana	1e-19	92.8	134	36.57
OS05G01020	Oryza sativa	1e-19	92.8	141	39.72
VC00G147530	Volvox carteri	2e-19	92.0	165	33.94
AT1G59890	Arabidopsis thaliana	1e-18	89.4	134	35.82
CV00G13480	Coccomyxa subellipsoidea C-169	7e-18	87.0	149	34.23
CR03G08780	Chlamydomonas reinhardtii	9e-18	86.7	141	35.46
BPRRCC1105_01G03950	Bathycoccus prasinos	3e-16	82.0	165	31.52
AT1G24220	Arabidopsis thaliana	1e-15	79.7	97	47.42
ORCC809_01G02570	Ostreococcus sp RCC809	2e-15	79.3	153	31.37
OM_01G02760	Ostreococcus mediterraneus	2e-15	79.3	156	33.33
MP02G03020	Micromonas pusilla strain CCMP1545	5e-15	78.2	175	29.71
AT1G70030	Arabidopsis thaliana	1e-14	72.8	137	34.31
RCC4223.04g02910	Picochlorum_RCC4223	2e-14	76.3	141	29.79
AT1G27220	Arabidopsis thaliana	3e-14	72.0	76	43.42
PP00122G00540	Physcomitrella patens	4e-14	75.9	159	33.33
PI00G68970	Picochlorum sp. SENEW3 (SE3)	4e-14	75.5	141	29.79
OL01G04190	Ostreococcus lucimarinus	4e-14	75.5	143	32.87
HE0000G60260	Helicosporidium sp.	8e-14	70.9	152	29.61
ATR_00036G01080	Amborella trichopoda	2e-13	68.9	96	37.50
AP00G33310	Auxenochlorella protothecoides	2e-12	67.0	120	35.83
MRCC299_01G02440	Micromonas sp RCC299	2e-12	70.5	170	29.41
CNC64A_032G00370	Chlorella sp NC64A	4e-12	65.9	133	31.58
OT_01G04000	Ostreococcus tauri	8e-12	68.6	168	29.76
TP03G03670	Thalassiosira pseudonana	1e-11	63.9	136	30.88
AT1G27250	Arabidopsis thaliana	3e-11	62.8	69	42.03
OS01G01960	Oryza sativa	3e-11	66.6	106	36.79
gsu57580	Galdieria sulphuraria	9e-11	65.1	66	40.91
FC008G06010	Fragilariopsis cylindrus	3e-10	63.2	140	29.29
AC00G27900	Asterochloris sp. Cgr-DA1pho v2.0	7e-10	62.4	116	33.62
OL05G01930	Ostreococcus lucimarinus	7e-10	62.0	147	25.85
AT5G15030	Arabidopsis thaliana	2e-09	60.1	66	39.39
ENSMUSG00000031622	Mus musculus	5e-09	59.7	158	29.75
ENSMUSG00000042557	Mus musculus	5e-09	59.7	66	37.88
ENSG00000169375	Homo sapiens	5e-09	59.7	66	37.88
FBgn0022764	Drosophila melanogaster	7e-09	59.3	80	33.75
ENSG00000127511	Homo sapiens	1e-08	58.9	159	28.93
phs105200	Phytophtora sojae	2e-08	58.2	66	37.88
AA0039G00150	Aureococcus anophagefferens	6e-08	56.6	180	24.44
SPBC12C2.10c	Schizosaccharomyces pombe	9e-08	55.8	66	39.39
AA0018G00030	Aureococcus anophagefferens	3e-07	50.8	65	36.92
AT4G12020	Arabidopsis thaliana	1e-06	52.8	70	35.71
AT5G35610	Arabidopsis thaliana	2e-06	50.1	150	28.00
AA0022G00920	Aureococcus anophagefferens	2e-06	48.5	65	35.38
CM17G01250	Cyanidioschyzon merolae	2e-06	52.0	89	31.46
ccr54500	Chondrus crispus	3e-06	51.2	66	33.33
BPRRCC1105_03G02470	Bathycoccus prasinos	5e-06	50.4	160	25.00
OM_03G02080	Ostreococcus mediterraneus	6e-06	50.1	107	28.97

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment