Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G26630	Arabidopsis thaliana	2e-113	325	160	100.00
AT1G69410	Arabidopsis thaliana	2e-98	288	156	87.18
AT1G13950	Arabidopsis thaliana	6e-93	273	156	82.05
OS12G32240	Oryza sativa	8e-90	266	158	80.38
OS07G40580	Oryza sativa	6e-89	263	158	79.75
ATR_00065G01940	Amborella trichopoda	2e-88	262	157	78.98
OS07G02210	Oryza sativa	2e-87	260	160	78.75
ATR_00058G00530	Amborella trichopoda	7e-87	258	157	78.34
OS03G55150	Oryza sativa	5e-86	256	171	73.68
PI00G30390	Picochlorum sp. SENEW3 (SE3)	5e-74	226	167	67.07
RCC4223.03g07220	Picochlorum_RCC4223	1e-72	222	167	66.47
AC00G08040	Asterochloris sp. Cgr-DA1pho v2.0	1e-70	217	156	66.67
AP00G54330	Auxenochlorella protothecoides	9e-70	215	160	63.75
CNC64A_005G04600	Chlorella sp NC64A	1e-69	214	154	64.94
AC00G08050	Asterochloris sp. Cgr-DA1pho v2.0	4e-64	200	139	69.06
MP02G04120	Micromonas pusilla strain CCMP1545	2e-63	199	160	58.13
OT_01G03210	Ostreococcus tauri	2e-62	196	167	56.89
HE0000G49730	Helicosporidium sp.	3e-62	199	178	58.43
MRCC299_01G01380	Micromonas sp RCC299	3e-62	196	161	58.39
CV00G23450	Coccomyxa subellipsoidea C-169	4e-61	192	147	64.63
OL01G03490	Ostreococcus lucimarinus	6e-60	190	162	58.02
ORCC809_01G03300	Ostreococcus sp RCC809	6e-60	190	162	56.79
OM_01G03510	Ostreococcus mediterraneus	1e-58	186	162	56.79
phs343450	Phytophtora sojae	8e-58	184	158	57.59
YJR047C	Saccharomyces cerevisiae strain S288C	8e-58	184	155	56.77
YEL034W	Saccharomyces cerevisiae strain S288C	1e-57	184	156	56.41
ES0000G01220	Ectocarpus siliculosus	1e-57	185	155	58.06
CR02G06630	Chlamydomonas reinhardtii	1e-55	179	161	54.66
VC00G106670	Volvox carteri	3e-55	177	164	54.88
Naga_100009g63	Nannochloropsis gaditana	6e-55	177	152	56.58
FBgn0034967	Drosophila melanogaster	1e-54	176	153	53.59
AA0001G01460	Aureococcus anophagefferens	1e-54	176	152	55.92
pte383960	Paramecium tetraurelia	1e-53	174	158	52.53
pte713330	Paramecium tetraurelia	1e-53	174	158	52.53
pte593660	Paramecium tetraurelia	1e-53	174	158	52.53
pte250510	Paramecium tetraurelia	2e-53	173	158	52.53
SPAC26H5.10c	Schizosaccharomyces pombe	2e-53	173	155	52.90
BPRRCC1105_08G01760	Bathycoccus prasinos	5e-53	172	163	51.53
emh396390	Emiliania huxleyi	1e-52	171	162	52.47
SPBC336.10c	Schizosaccharomyces pombe	1e-52	171	155	52.90
ENSMUSG00000078812	Mus musculus	6e-51	166	153	52.29
ENSG00000163577	Homo sapiens	1e-50	166	150	54.67
ENSMUSG00000050192	Mus musculus	1e-50	166	150	54.67
TP03G09040	Thalassiosira pseudonana	5e-49	162	157	49.04
ENSG00000253626	Homo sapiens	9e-49	160	153	50.98
PTI_01G11440	Phaeodactylum tricornutum	2e-47	157	157	50.32
WBGene00002064	Caenorhabditis elegans	1e-46	156	152	55.26
ccr188020	Chondrus crispus	2e-46	154	148	50.68
gsu103810	Galdieria sulphuraria	2e-44	150	157	47.77
WBGene00002065	Caenorhabditis elegans	1e-43	147	145	55.86
DDB_G0284861	Dictyostelium discoideum	2e-43	147	157	49.04
CM19G03510	Cyanidioschyzon merolae	1e-41	142	156	46.79
FC009G08450	Fragilariopsis cylindrus	4e-40	139	158	47.47
PP00462G00080	Physcomitrella patens	4e-22	90.1	81	48.15
OS07G13230	Oryza sativa	1e-21	91.7	66	66.67
pte713690	Paramecium tetraurelia	7e-20	85.9	134	29.10
MRCC299_11G03660	Micromonas sp RCC299	3e-13	67.4	135	32.59
MP08G00930	Micromonas pusilla strain CCMP1545	5e-13	67.8	160	31.25

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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