Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G24220	Arabidopsis thaliana	0.0	1507	745	100.00
AT1G27240	Arabidopsis thaliana	1e-31	127	240	35.42
AT1G24230	Arabidopsis thaliana	8e-30	124	278	34.53
AT1G27260	Arabidopsis thaliana	9e-27	114	227	33.92
AT1G23810	Arabidopsis thaliana	1e-26	114	105	59.05
AT1G24250	Arabidopsis thaliana	2e-24	108	115	52.17
AT1G27270	Arabidopsis thaliana	4e-19	92.4	240	31.25
AT1G24210	Arabidopsis thaliana	1e-18	89.4	62	64.52
AT1G27280	Arabidopsis thaliana	2e-18	90.1	97	47.42
AT5G15030	Arabidopsis thaliana	2e-13	75.5	270	27.04
PP00212G00120	Physcomitrella patens	4e-12	73.9	74	47.30
AT1G27220	Arabidopsis thaliana	6e-12	69.7	75	41.33
gsu57580	Galdieria sulphuraria	1e-11	72.8	73	41.10
ATR_00036G01080	Amborella trichopoda	2e-11	67.0	82	42.68
PP00101G00880	Physcomitrella patens	1e-10	69.3	78	42.31
PP00403G00290	Physcomitrella patens	2e-10	68.9	78	43.59
AT1G27250	Arabidopsis thaliana	5e-10	63.2	65	41.54
AT1G24200	Arabidopsis thaliana	7e-10	63.5	75	41.33
PP00178G00660	Physcomitrella patens	8e-10	64.3	111	39.64
AT3G01320	Arabidopsis thaliana	9e-10	66.6	65	49.23
AT1G70060	Arabidopsis thaliana	1e-09	66.2	89	38.20
PP00363G00060	Physcomitrella patens	1e-09	66.2	78	41.03
AT1G24190	Arabidopsis thaliana	2e-09	65.9	75	40.00
ATR_00090G01090	Amborella trichopoda	2e-09	65.5	82	42.68
AT5G15020	Arabidopsis thaliana	2e-09	65.1	97	38.14
AT1G59890	Arabidopsis thaliana	9e-09	63.2	70	42.86
AT1G10450	Arabidopsis thaliana	1e-08	63.2	81	39.51
ccr107580	Chondrus crispus	1e-08	62.8	286	23.78
phs105200	Phytophtora sojae	4e-08	61.2	97	37.11
ENSMUSG00000031622	Mus musculus	5e-08	60.8	173	24.86
ENSG00000169375	Homo sapiens	5e-08	60.8	69	37.68
ENSMUSG00000042557	Mus musculus	6e-08	60.8	69	37.68
ENSG00000127511	Homo sapiens	8e-08	60.1	158	25.32
SPBC12C2.10c	Schizosaccharomyces pombe	9e-08	60.1	110	33.64
CV00G13480	Coccomyxa subellipsoidea C-169	1e-07	59.3	87	36.78
AA0018G00030	Aureococcus anophagefferens	1e-07	55.1	73	36.99
AC00G27900	Asterochloris sp. Cgr-DA1pho v2.0	2e-07	58.9	205	24.39
PTI_29G00720	Phaeodactylum tricornutum	2e-07	58.9	268	22.76
FBgn0022764	Drosophila melanogaster	3e-07	58.5	107	33.64
CM17G01250	Cyanidioschyzon merolae	3e-07	58.5	313	22.68
OS05G01020	Oryza sativa	5e-07	57.8	65	43.08
AA0022G00920	Aureococcus anophagefferens	5e-07	53.1	64	39.06
YOL004W	Saccharomyces cerevisiae strain S288C	7e-07	57.4	272	23.16
ORCC809_01G02570	Ostreococcus sp RCC809	8e-07	57.0	62	40.32
Naga_100390g3	Nannochloropsis gaditana	1e-06	55.8	238	23.11
BPRRCC1105_01G03950	Bathycoccus prasinos	2e-06	55.8	62	40.32
AT4G12020	Arabidopsis thaliana	2e-06	55.8	73	42.47
TP03G03670	Thalassiosira pseudonana	2e-06	52.4	93	32.26
PTI_10G03700	Phaeodactylum tricornutum	2e-06	55.5	81	35.80
AA0039G00150	Aureococcus anophagefferens	2e-06	55.5	76	36.84
CR03G08780	Chlamydomonas reinhardtii	2e-06	55.5	73	36.99
VC00G147530	Volvox carteri	4e-06	54.7	88	35.23
FC015G01010	Fragilariopsis cylindrus	4e-06	54.3	254	23.62
AP00G33310	Auxenochlorella protothecoides	5e-06	51.2	73	38.36
AT5G15040	Arabidopsis thaliana	6e-06	50.4	62	38.71
OS01G01960	Oryza sativa	6e-06	53.9	89	34.83
ccr54500	Chondrus crispus	6e-06	54.3	69	36.23
TP07G04750	Thalassiosira pseudonana	9e-06	53.5	67	40.30
MRCC299_01G02440	Micromonas sp RCC299	9e-06	53.5	62	38.71
FC008G06010	Fragilariopsis cylindrus	9e-06	53.1	67	38.81

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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