Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G15140	Arabidopsis thaliana	0.0	605	296	100.00
OS02G22260	Oryza sativa	3e-110	328	252	64.29
ATR_00006G00160	Amborella trichopoda	1e-104	315	259	60.23
PP00004G00790	Physcomitrella patens	4e-91	280	252	52.78
OS01G03050	Oryza sativa	6e-83	258	242	52.48
CNC64A_004G03090	Chlorella sp NC64A	8e-56	188	231	45.45
CV00G43750	Coccomyxa subellipsoidea C-169	1e-55	188	240	45.83
PTI_20G01670	Phaeodactylum tricornutum	4e-53	189	248	41.53
FC001G04700	Fragilariopsis cylindrus	2e-52	178	247	40.89
AP00G40260	Auxenochlorella protothecoides	5e-52	179	214	50.93
CR01G00090	Chlamydomonas reinhardtii	3e-51	180	233	46.35
PI00G69400	Picochlorum sp. SENEW3 (SE3)	2e-50	174	242	44.63
RCC4223.13g01050	Picochlorum_RCC4223	3e-49	172	242	44.63
VC00G65670	Volvox carteri	7e-48	176	238	45.80
ccr80080	Chondrus crispus	7e-47	167	265	38.87
emh472220	Emiliania huxleyi	8e-47	164	273	42.12
CM03G00760	Cyanidioschyzon merolae	7e-46	166	248	38.71
PP00057G00380	Physcomitrella patens	5e-45	159	248	39.11
ES0308G00040	Ectocarpus siliculosus	1e-44	159	240	39.58
MRCC299_09G00710	Micromonas sp RCC299	1e-40	149	212	41.04
gsu39420	Galdieria sulphuraria	3e-39	145	235	37.45
gsu39400	Galdieria sulphuraria	4e-39	145	235	37.45
AC00G23330	Asterochloris sp. Cgr-DA1pho v2.0	2e-38	140	214	43.93
TP05G00310	Thalassiosira pseudonana	3e-38	144	288	36.46
MP07G05130	Micromonas pusilla strain CCMP1545	2e-36	137	228	41.67
OM_04G03180	Ostreococcus mediterraneus	3e-34	131	226	41.15
ORCC809_02G00980	Ostreococcus sp RCC809	8e-34	130	210	39.52
BPRRCC1105_13G02670	Bathycoccus prasinos	1e-33	130	247	34.82
OL02G05250	Ostreococcus lucimarinus	3e-33	126	209	40.19
AA0019G01520	Aureococcus anophagefferens	6e-33	127	256	36.72
OL02G05240	Ostreococcus lucimarinus	3e-31	123	205	40.00
FC032G01440	Fragilariopsis cylindrus	7e-24	103	259	30.89
OT_02G02460	Ostreococcus tauri	2e-17	83.6	237	32.49
PP00009G01960	Physcomitrella patens	8e-14	74.7	233	25.32
gsu59770	Galdieria sulphuraria	4e-10	64.3	155	32.90
AC00G78320	Asterochloris sp. Cgr-DA1pho v2.0	8e-10	62.8	219	26.94
CNC64A_001G05470	Chlorella sp NC64A	1e-09	62.4	67	47.76
ccr14620	Chondrus crispus	1e-09	62.8	216	26.85
VC00G66070	Volvox carteri	4e-08	57.8	146	32.19
AT1G20020	Arabidopsis thaliana	7e-08	57.0	175	25.71
FC034G00550	Fragilariopsis cylindrus	4e-07	54.7	197	23.86
CV00G16690	Coccomyxa subellipsoidea C-169	4e-07	54.7	93	35.48
AP00G60420	Auxenochlorella protothecoides	3e-06	52.8	232	22.84
FC007G02270	Fragilariopsis cylindrus	4e-06	51.6	169	27.22
OS02G01340	Oryza sativa	4e-06	51.6	164	24.39
phs336850	Phytophtora sojae	5e-06	51.2	170	25.29
ccr16780	Chondrus crispus	6e-06	50.8	164	22.56
PI00G18460	Picochlorum sp. SENEW3 (SE3)	9e-06	50.4	85	35.29

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment