Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G12520	Arabidopsis thaliana	0.0	655	321	100.00
ATR_00069G01750	Amborella trichopoda	2e-117	345	231	69.70
OS04G48410	Oryza sativa	1e-112	336	229	69.43
PP00441G00070	Physcomitrella patens	1e-103	314	238	64.29
PP00019G01090	Physcomitrella patens	1e-102	311	256	59.77
ENSG00000173992	Homo sapiens	7e-49	171	239	40.17
ENSMUSG00000034108	Mus musculus	1e-45	162	239	39.75
OL19G00460	Ostreococcus lucimarinus	2e-44	157	230	41.30
OM_19G00550	Ostreococcus mediterraneus	1e-40	150	255	40.39
BPRRCC1105_15G00510	Bathycoccus prasinos	2e-39	148	253	39.53
MP13G03410	Micromonas pusilla strain CCMP1545	5e-38	144	267	36.70
ORCC809_19G00690	Ostreococcus sp RCC809	6e-37	137	231	39.83
PP00098G00630	Physcomitrella patens	4e-29	117	167	41.92
MRCC299_10G00790	Micromonas sp RCC299	6e-28	114	260	35.00
OT_20G00480	Ostreococcus tauri	4e-27	112	249	36.55
FBgn0010531	Drosophila melanogaster	8e-27	111	255	32.55
YMR038C	Saccharomyces cerevisiae strain S288C	7e-21	94.0	236	28.39
DDB_G0291031	Dictyostelium discoideum	1e-16	82.4	322	22.67
ATR_00068G00390	Amborella trichopoda	2e-12	68.6	121	34.71
WBGene00004930	Caenorhabditis elegans	2e-11	65.5	128	33.59
OL19G00450	Ostreococcus lucimarinus	5e-11	64.7	110	35.45
AT2G28190	Arabidopsis thaliana	1e-10	64.3	122	34.43
DDB_G0290343	Dictyostelium discoideum	2e-10	62.4	122	28.69
pte532370	Paramecium tetraurelia	3e-10	62.4	111	32.43
ATR_00102G00330	Amborella trichopoda	6e-10	62.0	121	33.88
WBGene00007036	Caenorhabditis elegans	7e-10	61.2	134	35.82
ORCC809_19G00700	Ostreococcus sp RCC809	9e-10	60.8	113	33.63
PP00131G00420	Physcomitrella patens	9e-10	61.2	122	31.97
PP00018G00490	Physcomitrella patens	9e-10	60.5	122	33.61
AT5G18100	Arabidopsis thaliana	1e-09	60.5	112	33.04
OS03G11960	Oryza sativa	1e-09	60.1	105	34.29
PP00131G00800	Physcomitrella patens	2e-09	60.5	122	31.97
YJR104C	Saccharomyces cerevisiae strain S288C	2e-09	59.7	123	34.96
OS08G44770	Oryza sativa	2e-09	60.5	121	35.54
OT_20G00450	Ostreococcus tauri	3e-09	60.8	110	34.55
MRCC299_10G00800	Micromonas sp RCC299	3e-09	59.7	113	32.74
ccr126100	Chondrus crispus	6e-09	60.5	138	31.88
PP00044G01480	Physcomitrella patens	8e-09	57.8	112	34.82
AA0013G00780	Aureococcus anophagefferens	8e-09	57.8	95	32.63
DDB_G0267420	Dictyostelium discoideum	9e-09	57.8	115	33.91
PTI_21G01740	Phaeodactylum tricornutum	9e-09	57.8	146	28.08
MP13G03420	Micromonas pusilla strain CCMP1545	1e-08	58.2	110	33.64
DDB_G0281461	Dictyostelium discoideum	1e-08	57.4	122	31.97
AP00G18550	Auxenochlorella protothecoides	1e-08	55.8	64	40.62
OS03G22810	Oryza sativa	1e-08	58.9	111	33.33
ENSMUSG00000022982	Mus musculus	2e-08	57.0	125	30.40
OM_19G00540	Ostreococcus mediterraneus	2e-08	57.4	110	33.64
WBGene00004933	Caenorhabditis elegans	3e-08	57.4	112	32.14
FBgn0033631	Drosophila melanogaster	3e-08	57.4	128	35.16
AA0001G06690	Aureococcus anophagefferens	3e-08	55.5	111	33.33
ATR_00057G01290	Amborella trichopoda	4e-08	55.8	111	30.63
Naga_100653g3	Nannochloropsis gaditana	6e-08	55.1	84	38.10
AT1G66240	Arabidopsis thaliana	8e-08	54.3	68	42.65
BPRRCC1105_15G00500	Bathycoccus prasinos	9e-08	55.5	95	33.68
ENSG00000142168	Homo sapiens	1e-07	54.3	126	31.75
OS07G46990	Oryza sativa	1e-07	54.3	111	30.63
FBgn0003462	Drosophila melanogaster	3e-07	53.5	96	35.42
AT1G06330	Arabidopsis thaliana	3e-07	53.1	66	39.39
pte418910	Paramecium tetraurelia	4e-07	53.5	95	33.68
AT1G08830	Arabidopsis thaliana	4e-07	52.8	111	28.83
HE0000G42630	Helicosporidium sp.	1e-06	50.4	59	37.29
DDB_G0281493	Dictyostelium discoideum	1e-06	51.2	128	28.12
ATR_00040G01590	Amborella trichopoda	1e-06	50.1	62	40.32
OS01G55320	Oryza sativa	5e-06	49.7	58	34.48
ES0003G00410	Ectocarpus siliculosus	6e-06	49.3	95	26.32
OS08G10480	Oryza sativa	7e-06	48.1	53	41.51
AT3G02960	Arabidopsis thaliana	7e-06	50.4	91	30.77
AT3G56891	Arabidopsis thaliana	1e-05	48.9	63	30.16

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment