Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G09340	Arabidopsis thaliana	0.0	780	379	100.00
OS12G23180	Oryza sativa	0.0	612	358	80.17
PP00071G00870	Physcomitrella patens	0.0	542	325	78.15
ATR_00003G01970	Amborella trichopoda	3e-172	489	278	81.29
CR10G04000	Chlamydomonas reinhardtii	1e-171	492	322	71.12
VC00G64640	Volvox carteri	4e-170	488	321	71.65
PI00G00850	Picochlorum sp. SENEW3 (SE3)	2e-168	484	329	68.69
RCC4223.17g01320	Picochlorum_RCC4223	1e-167	482	320	69.38
CV00G62230	Coccomyxa subellipsoidea C-169	4e-160	462	330	66.06
AP00G51360	Auxenochlorella protothecoides	1e-157	454	324	64.51
AC00G86630	Asterochloris sp. Cgr-DA1pho v2.0	3e-156	473	333	66.07
CNC64A_018G02040	Chlorella sp NC64A	5e-156	452	325	64.92
CM08G00470	Cyanidioschyzon merolae	1e-109	334	326	50.61
Naga_100246g10	Nannochloropsis gaditana	2e-108	330	324	51.23
ES0012G00570	Ectocarpus siliculosus	3e-107	327	382	43.98
ccr70600	Chondrus crispus	1e-104	321	327	48.01
gsu124340	Galdieria sulphuraria	4e-95	296	329	48.63
PTI_23G00490	Phaeodactylum tricornutum	1e-86	273	331	45.02
RCC4223.18g00860	Picochlorum_RCC4223	1e-60	206	321	36.45
PI00G49400	Picochlorum sp. SENEW3 (SE3)	3e-60	205	321	36.14
OS07G11110	Oryza sativa	6e-59	202	322	37.58
PP00055G00640	Physcomitrella patens	3e-58	201	384	35.42
AC00G41730	Asterochloris sp. Cgr-DA1pho v2.0	7e-58	198	316	35.44
CR10G04860	Chlamydomonas reinhardtii	2e-57	199	323	37.77
VC00G21810	Volvox carteri	1e-56	197	349	36.10
OM_14G02220	Ostreococcus mediterraneus	5e-56	195	337	37.69
AT3G63140	Arabidopsis thaliana	1e-55	194	348	35.34
OT_15G00960	Ostreococcus tauri	5e-54	189	338	36.69
CV00G43910	Coccomyxa subellipsoidea C-169	6e-54	188	317	35.02
OL14G00870	Ostreococcus lucimarinus	5e-52	182	333	37.84
OL14G01530	Ostreococcus lucimarinus	5e-52	182	333	37.84
MRCC299_05G07390	Micromonas sp RCC299	1e-49	177	336	34.82
ORCC809_14G01290	Ostreococcus sp RCC809	1e-49	176	335	37.31
PP00020G01510	Physcomitrella patens	3e-46	163	130	60.77
ATR_00025G03940	Amborella trichopoda	5e-45	161	219	41.55
MP16G03610	Micromonas pusilla strain CCMP1545	9e-45	164	327	36.09
emh151300	Emiliania huxleyi	2e-43	160	348	33.05
emh400140	Emiliania huxleyi	2e-43	160	348	33.05
BPRRCC1105_02G02240	Bathycoccus prasinos	4e-43	159	351	33.90
ES0007G00640	Ectocarpus siliculosus	1e-38	147	316	30.70
CNC64A_022G01720	Chlorella sp NC64A	3e-38	145	358	31.84
AP00G38200	Auxenochlorella protothecoides	7e-37	141	316	31.33
ccr180680	Chondrus crispus	1e-31	127	323	31.58
TP02G04440	Thalassiosira pseudonana	9e-28	116	286	32.52
gsu69090	Galdieria sulphuraria	1e-27	115	301	29.57
CM12G00470	Cyanidioschyzon merolae	4e-26	112	389	28.79
FC006G06140	Fragilariopsis cylindrus	5e-23	102	222	35.14
AA0011G02340	Aureococcus anophagefferens	9e-21	95.9	325	29.23
PTI_01G10420	Phaeodactylum tricornutum	4e-20	94.7	349	26.07
ORCC809_18G00560	Ostreococcus sp RCC809	2e-10	65.9	291	22.68
ORCC809_18G00590	Ostreococcus sp RCC809	2e-09	62.4	288	22.57
OT_05G04720	Ostreococcus tauri	2e-08	59.3	328	23.78
ORCC809_19G00190	Ostreococcus sp RCC809	8e-08	57.8	326	23.93
emh449490	Emiliania huxleyi	5e-07	55.1	207	25.12
OM_04G03270	Ostreococcus mediterraneus	5e-07	55.1	324	22.53
OL18G00200	Ostreococcus lucimarinus	7e-06	51.6	323	22.29

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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