Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT1G02335	Arabidopsis thaliana	1e-159	447	220	100.00
AT3G62020	Arabidopsis thaliana	9e-110	321	201	76.12
OS05G19670	Oryza sativa	3e-97	290	198	69.70
OS01G14670	Oryza sativa	7e-93	278	197	68.53
AT1G09560	Arabidopsis thaliana	1e-90	273	197	63.96
ATR_00045G01680	Amborella trichopoda	2e-90	272	200	63.50
OS01G72290	Oryza sativa	1e-85	260	201	61.19
OS01G18170	Oryza sativa	5e-83	253	194	66.49
AT5G26700	Arabidopsis thaliana	2e-82	251	195	60.00
OS03G44880	Oryza sativa	3e-82	251	200	59.00
AT3G05930	Arabidopsis thaliana	2e-79	244	221	53.85
OS01G72300	Oryza sativa	2e-71	224	230	49.57
OS02G29000	Oryza sativa	4e-71	223	216	50.00
OS02G29020	Oryza sativa	6e-69	217	198	52.53
AT1G18980	Arabidopsis thaliana	3e-67	213	203	49.26
OS12G05870	Oryza sativa	6e-67	212	223	48.88
ATR_00089G00770	Amborella trichopoda	1e-65	209	207	49.76
ATR_00794G00010	Amborella trichopoda	2e-65	208	210	48.10
OS12G05840	Oryza sativa	3e-65	208	223	47.98
ATR_00067G00020	Amborella trichopoda	7e-65	207	196	50.51
OS08G08970	Oryza sativa	3e-64	205	198	50.00
OS12G05860	Oryza sativa	3e-64	205	223	47.98
ATR_00089G00670	Amborella trichopoda	6e-64	204	208	48.08
ATR_00089G00660	Amborella trichopoda	2e-63	203	197	50.76
OS08G08980	Oryza sativa	5e-63	202	197	49.24
OS08G13440	Oryza sativa	4e-62	200	202	50.00
PP00021G01310	Physcomitrella patens	6e-62	199	216	46.76
PP00021G01280	Physcomitrella patens	6e-62	199	216	46.76
AT1G18970	Arabidopsis thaliana	7e-62	199	203	46.31
OS08G08960	Oryza sativa	2e-61	198	198	48.99
ATR_00002G03050	Amborella trichopoda	2e-61	198	195	47.69
OS08G08920	Oryza sativa	2e-60	195	219	47.49
AT5G39160	Arabidopsis thaliana	1e-59	193	221	41.63
AT5G39130	Arabidopsis thaliana	2e-59	193	221	42.08
AT5G39190	Arabidopsis thaliana	2e-59	193	221	41.63
OS03G59010	Oryza sativa	2e-59	193	216	41.20
AT5G39120	Arabidopsis thaliana	2e-59	192	219	42.92
AT5G39110	Arabidopsis thaliana	2e-59	192	220	43.64
AT5G39150	Arabidopsis thaliana	3e-59	192	219	42.92
OS01G50900	Oryza sativa	5e-59	192	193	49.22
ATR_00089G00680	Amborella trichopoda	6e-59	192	201	46.27
PP00338G00270	Physcomitrella patens	9e-59	191	207	46.38
AT3G05950	Arabidopsis thaliana	2e-58	191	216	44.44
PP00068G00130	Physcomitrella patens	2e-58	192	208	46.63
PP00068G00160	Physcomitrella patens	2e-58	192	208	46.63
PP00068G00080	Physcomitrella patens	2e-58	192	208	46.63
AT5G39180	Arabidopsis thaliana	2e-58	190	219	42.47
OS04G52720	Oryza sativa	2e-58	191	200	48.00
OS08G09040	Oryza sativa	3e-58	189	218	45.41
OS03G58980	Oryza sativa	1e-57	189	197	44.16
AT5G38930	Arabidopsis thaliana	2e-57	187	198	48.99
AT4G14630	Arabidopsis thaliana	3e-57	187	217	44.24
AT5G38940	Arabidopsis thaliana	9e-57	186	196	47.45
OS08G09010	Oryza sativa	2e-56	185	197	48.22
AT3G04200	Arabidopsis thaliana	4e-56	184	205	45.37
OS08G08990	Oryza sativa	7e-56	184	198	47.98
OS08G09000	Oryza sativa	7e-56	184	197	47.72
OS08G09020	Oryza sativa	1e-55	183	197	48.22
AT5G38910	Arabidopsis thaliana	1e-55	183	211	44.55
OS12G05880	Oryza sativa	3e-55	181	186	49.46
OS03G48750	Oryza sativa	7e-55	181	200	47.00
OS08G09080	Oryza sativa	2e-54	180	198	47.98
AT5G38960	Arabidopsis thaliana	2e-54	180	200	46.00
OS08G09060	Oryza sativa	6e-54	179	197	47.21
ATR_00154G00220	Amborella trichopoda	2e-53	176	176	49.43
PP00337G00050	Physcomitrella patens	2e-53	177	215	41.86
PP00086G00130	Physcomitrella patens	3e-53	178	214	43.93
PP00273G00230	Physcomitrella patens	2e-52	174	197	46.19
OS03G48780	Oryza sativa	3e-52	174	200	46.00
OS03G48770	Oryza sativa	3e-52	174	200	46.00
OS03G48760	Oryza sativa	4e-52	174	200	46.00
PP00082G00010	Physcomitrella patens	2e-49	167	201	42.29
OS05G10830	Oryza sativa	5e-49	166	205	42.44
PP00082G00020	Physcomitrella patens	5e-49	166	201	42.29
AT3G04180	Arabidopsis thaliana	3e-48	164	197	41.62
AT3G04190	Arabidopsis thaliana	1e-47	162	188	42.55
AT3G04170	Arabidopsis thaliana	2e-47	162	213	41.31
AT3G04150	Arabidopsis thaliana	4e-47	162	228	35.96
OS02G32980	Oryza sativa	7e-47	160	202	40.59
ATR_00089G00720	Amborella trichopoda	1e-46	158	154	50.00
ATR_00074G00120	Amborella trichopoda	1e-46	159	218	38.07
ATR_00154G00210	Amborella trichopoda	7e-46	157	176	43.75
ATR_00154G00250	Amborella trichopoda	6e-45	155	158	46.84
AT1G74820	Arabidopsis thaliana	6e-45	155	221	36.65
ATR_00089G00690	Amborella trichopoda	4e-43	149	178	43.82
AT1G72610	Arabidopsis thaliana	7e-43	149	190	40.53
AT3G10080	Arabidopsis thaliana	4e-42	148	202	37.62
ATR_00110G00020	Amborella trichopoda	3e-41	145	148	45.27
PP00156G00260	Physcomitrella patens	1e-40	144	219	37.90
ATR_00114G00120	Amborella trichopoda	1e-40	144	202	39.60
OS03G08150	Oryza sativa	2e-40	144	223	38.12
AT5G20630	Arabidopsis thaliana	3e-40	142	201	39.80
PP00206G00600	Physcomitrella patens	4e-40	142	213	38.97
OS09G39530	Oryza sativa	6e-39	139	206	38.83
PP00097G00270	Physcomitrella patens	7e-38	136	213	37.09
ATR_00040G00690	Amborella trichopoda	2e-37	135	200	38.00
AT1G10460	Arabidopsis thaliana	4e-37	135	203	38.42
ATR_00024G02410	Amborella trichopoda	5e-37	134	187	38.50
ATR_00016G02910	Amborella trichopoda	9e-37	134	179	39.11
ATR_00121G00450	Amborella trichopoda	2e-36	132	218	37.16
OS08G35750	Oryza sativa	7e-36	132	217	33.18
OS08G35760	Oryza sativa	8e-36	131	188	38.30
ATR_00040G00700	Amborella trichopoda	1e-35	130	215	37.21
AT5G39100	Arabidopsis thaliana	5e-35	127	128	44.53
ATR_00121G00440	Amborella trichopoda	6e-35	129	218	36.24
ATR_00121G00460	Amborella trichopoda	6e-34	126	218	35.32
OS09G39520	Oryza sativa	6e-34	126	210	39.52
PP00097G00260	Physcomitrella patens	1e-33	125	138	44.93
OS11G33110	Oryza sativa	3e-33	125	178	38.76
ATR_00121G00410	Amborella trichopoda	3e-32	122	209	36.84
AT5G61750	Arabidopsis thaliana	5e-32	121	200	32.50
PP00039G00620	Physcomitrella patens	3e-31	119	214	35.51
PP00010G01540	Physcomitrella patens	7e-31	119	213	31.46
ATR_00165G00310	Amborella trichopoda	7e-29	113	198	34.85
ATR_00002G01360	Amborella trichopoda	6e-28	109	145	37.24
ATR_00121G00420	Amborella trichopoda	2e-27	108	180	36.11
OS09G39510	Oryza sativa	5e-27	108	197	35.53
OS03G58990	Oryza sativa	1e-24	100	171	35.09
ATR_00040G00850	Amborella trichopoda	6e-21	90.9	113	38.94
ATR_00089G00700	Amborella trichopoda	3e-19	84.3	100	42.00
ES0731G00010	Ectocarpus siliculosus	2e-18	85.1	165	30.30
ES0128G00210	Ectocarpus siliculosus	2e-18	85.1	165	30.30
ES0128G00240	Ectocarpus siliculosus	4e-18	84.0	165	30.30
ES0118G00190	Ectocarpus siliculosus	8e-18	83.2	165	30.30
ATR_02363G00010	Amborella trichopoda	3e-17	80.9	120	40.83
ES0128G00170	Ectocarpus siliculosus	4e-16	78.2	162	28.40
PP00027G00160	Physcomitrella patens	1e-14	73.2	83	42.17
PP00009G02260	Physcomitrella patens	7e-14	70.1	123	28.46
ATR_03649G00010	Amborella trichopoda	8e-14	68.9	87	44.83
PP00149G00830	Physcomitrella patens	4e-12	66.2	121	30.58
ATR_00072G01040	Amborella trichopoda	5e-12	63.2	63	50.79
AT5G38950	Arabidopsis thaliana	6e-12	63.9	65	44.62
ATR_00033G01940	Amborella trichopoda	9e-12	63.9	130	32.31
AC00G25980	Asterochloris sp. Cgr-DA1pho v2.0	1e-10	62.4	144	27.78
CV00G32770	Coccomyxa subellipsoidea C-169	3e-10	61.6	105	32.38
AC00G26230	Asterochloris sp. Cgr-DA1pho v2.0	7e-09	58.2	108	31.48
HE0000G09800	Helicosporidium sp.	9e-09	57.4	101	32.67
ES0118G00240	Ectocarpus siliculosus	5e-06	48.5	102	27.45

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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