Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AP00G37470	Auxenochlorella protothecoides	0.0	1046	501	100.00
HE0000G56330	Helicosporidium sp.	0.0	692	514	63.04
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	681	509	63.26
RCC4223.04g06590	Picochlorum_RCC4223	0.0	678	509	63.06
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	641	529	56.90
AT4G02280	Arabidopsis thaliana	0.0	637	508	59.65
ATR_00106G00050	Amborella trichopoda	0.0	624	504	59.13
PP00303G00240	Physcomitrella patens	0.0	621	527	57.12
OS03G22120	Oryza sativa	0.0	619	504	59.72
AT5G20830	Arabidopsis thaliana	0.0	617	507	58.38
AT3G43190	Arabidopsis thaliana	0.0	614	507	58.19
PP00093G00500	Physcomitrella patens	0.0	613	528	56.06
PP00120G00370	Physcomitrella patens	0.0	607	525	56.38
PP00028G02030	Physcomitrella patens	0.0	598	522	56.32
AT5G49190	Arabidopsis thaliana	0.0	596	504	58.13
CNC64A_002G04500	Chlorella sp NC64A	0.0	589	516	58.14
OS07G42490	Oryza sativa	0.0	585	503	57.26
OS02G58480	Oryza sativa	0.0	585	523	53.92
OS03G28330	Oryza sativa	0.0	583	504	56.94
OS06G09450	Oryza sativa	0.0	570	503	55.07
OS04G24430	Oryza sativa	0.0	570	509	53.24
ATR_00044G00210	Amborella trichopoda	0.0	563	510	54.71
AT5G37180	Arabidopsis thaliana	0.0	563	508	54.13
AT1G73370	Arabidopsis thaliana	0.0	559	509	52.85
OS04G17650	Oryza sativa	8e-178	526	462	54.98
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	1e-156	472	493	48.68
AP00G37480	Auxenochlorella protothecoides	7e-80	262	123	100.00
AT4G10120	Arabidopsis thaliana	4e-33	138	532	25.38
ATR_00099G00850	Amborella trichopoda	3e-30	129	494	24.90
OS02G09170	Oryza sativa	2e-29	127	498	25.30
OS01G69030	Oryza sativa	2e-29	126	493	26.37
AT1G04920	Arabidopsis thaliana	7e-28	122	462	24.46
PP00131G00600	Physcomitrella patens	8e-28	121	518	24.90
PI00G14670	Picochlorum sp. SENEW3 (SE3)	1e-27	121	554	24.19
OS11G12810	Oryza sativa	3e-27	120	368	26.36
OS06G43630	Oryza sativa	3e-27	120	510	24.31
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	3e-27	119	492	24.19
ATR_00033G01740	Amborella trichopoda	1e-26	118	489	24.95
PP00066G01210	Physcomitrella patens	1e-26	117	524	24.81
AT5G11110	Arabidopsis thaliana	6e-26	115	512	23.63
OS08G20660	Oryza sativa	1e-25	115	564	23.76
RCC4223.05g02250	Picochlorum_RCC4223	1e-24	112	554	23.47
AT5G20280	Arabidopsis thaliana	7e-23	106	516	23.64
CNC64A_014G03230	Chlorella sp NC64A	2e-21	101	198	31.31
CR12G08850	Chlamydomonas reinhardtii	5e-21	101	190	32.63
HE0000G57540	Helicosporidium sp.	2e-20	99.0	196	32.14
CV00G68630	Coccomyxa subellipsoidea C-169	4e-20	98.6	554	23.83
AP00G64190	Auxenochlorella protothecoides	6e-20	97.8	531	23.16
gsu138950	Galdieria sulphuraria	1e-18	93.6	495	23.03
CM20G01680	Cyanidioschyzon merolae	2e-07	57.4	202	24.26
ES0097G00100	Ectocarpus siliculosus	2e-07	57.0	227	26.43
WBGene00017282	Caenorhabditis elegans	1e-06	54.7	238	25.21

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment