Gene: tps166950 (Thalassiosira pseudonana)

Overview top

Gene Identifier
tps166950
Transcript Identifier
tps166950.1
Gene Type
Coding gene
Location
6 : 678019-678776 : negative

Family Information

Homologous gene family
HOM02SEM000492
(77 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000497
(74 genes in 26 species)
specific family

Descriptions

gene_descr
predicted protein
eggnog_description
ubiquitin-conjugating enzyme

Identifiers

Type Value
pidEED91512
old_giTHAPSDRAFT_35107
UniprotB8C5I3
STRING35128.Thaps35107

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030433
IEA
EggNOGmapperubiquitin-dependent ERAD pathway
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process ENSG00000198833
GO:0051234
IEA
PLAZA Integrative Orthologyestablishment of localization ENSG00000198833
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT5G50430
GO:0042886
IEA
PLAZA Integrative Orthologyamide transport ENSG00000198833
GO:0009987
IEA
PLAZA Integrative Orthologycellular process AT5G50430
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process AT1G17280
GO:1905897
IEA
PLAZA Integrative Orthologyregulation of response to endoplasmic reticulum stress ENSG00000198833
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G50430
GO:0033157
IEA
PLAZA Integrative Orthologyregulation of intracellular protein transport ENSG00000198833
GO:0033036
IEA
PLAZA Integrative Orthologymacromolecule localization ENSG00000198833
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process AT1G17280
GO:0051223
IEA
PLAZA Integrative Orthologyregulation of protein transport ENSG00000198833
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process AT1G17280
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus AT5G50430
GO:1990069
IEA
PLAZA Integrative Orthologystomatal opening AT5G50430
GO:0051224
IEA
PLAZA Integrative Orthologynegative regulation of protein transport ENSG00000198833
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT1G17280
GO:0042631
IEA
PLAZA Integrative Orthologycellular response to water deprivation AT5G50430
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process ENSG00000198833
GO:0044257
IEA
PLAZA Integrative Orthologycellular protein catabolic process AT1G17280
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process ENSG00000198833
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process YER100W
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process AT1G17280
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process AT1G17280
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process AT1G17280
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus AT5G50430
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT1G17280
GO:0032879
IEA
PLAZA Integrative Orthologyregulation of localization ENSG00000198833
GO:0043161
IEA
EggNOGmapperproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0031668
IEA
PLAZA Integrative Orthologycellular response to extracellular stimulus AT5G50430
GO:0006810
IEA
PLAZA Integrative Orthologytransport ENSG00000198833
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process AT1G17280
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process ENSG00000198833
GO:1903573
IEA
PLAZA Integrative Orthologynegative regulation of response to endoplasmic reticulum stress ENSG00000198833
GO:0032880
IEA
PLAZA Integrative Orthologyregulation of protein localization ENSG00000198833
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus AT5G50430
GO:0070647
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation or removal YER100W
GO:0032527
IEA
PLAZA Integrative Orthologyprotein exit from endoplasmic reticulum ENSG00000198833
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT5G50430
GO:0070085
IEA
PLAZA Integrative Orthologyglycosylation ENSG00000198833
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT1G17280
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT5G50430
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT1G17280
GO:1901701
IEA
PLAZA Integrative Orthologycellular response to oxygen-containing compound AT5G50430
GO:0006487
IEA
PLAZA Integrative Orthologyprotein N-linked glycosylation ENSG00000198833
GO:0042177
IEA
PLAZA Integrative Orthologynegative regulation of protein catabolic process ENSG00000198833
GO:0006486
IEA
PLAZA Integrative Orthologyprotein glycosylation ENSG00000198833
GO:0042176
IEA
PLAZA Integrative Orthologyregulation of protein catabolic process ENSG00000198833
GO:0009991
IEA
PLAZA Integrative Orthologyresponse to extracellular stimulus AT5G50430
GO:0061136
IEA
PLAZA Integrative Orthologyregulation of proteasomal protein catabolic process ENSG00000198833
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process YER100W
GO:0010243
IEA
PLAZA Integrative Orthologyresponse to organonitrogen compound YER100W
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus AT5G50430
GO:1903828
IEA
PLAZA Integrative Orthologynegative regulation of cellular protein localization ENSG00000198833
GO:1903827
IEA
PLAZA Integrative Orthologyregulation of cellular protein localization ENSG00000198833
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification YER100W
GO:0043413
IEA
PLAZA Integrative Orthologymacromolecule glycosylation ENSG00000198833
GO:0000209
IEA
PLAZA Integrative Orthologyprotein polyubiquitination YER100W
GO:0036503
IEA
PLAZA Integrative OrthologyERAD pathway YER100W
GO:0032269
IEA
PLAZA Integrative Orthologynegative regulation of cellular protein metabolic process ENSG00000198833
GO:0032387
IEA
PLAZA Integrative Orthologynegative regulation of intracellular transport ENSG00000198833
GO:0032386
IEA
PLAZA Integrative Orthologyregulation of intracellular transport ENSG00000198833
GO:0010118
IEA
PLAZA Integrative Orthologystomatal movement AT5G50430
GO:0032268
IEA
PLAZA Integrative Orthologyregulation of cellular protein metabolic process ENSG00000198833
GO:0010119
IEA
PLAZA Integrative Orthologyregulation of stomatal movement AT5G50430
GO:0015833
IEA
PLAZA Integrative Orthologypeptide transport ENSG00000198833
GO:0043632
IEA
PLAZA Integrative Orthologymodification-dependent macromolecule catabolic process AT1G17280
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process AT5G50430
GO:0046907
IEA
PLAZA Integrative Orthologyintracellular transport ENSG00000198833
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance YER100W
GO:0010498
IEA
PLAZA Integrative Orthologyproteasomal protein catabolic process YER100W
GO:0051248
IEA
PLAZA Integrative Orthologynegative regulation of protein metabolic process ENSG00000198833
GO:0070201
IEA
PLAZA Integrative Orthologyregulation of establishment of protein localization ENSG00000198833
GO:0051246
IEA
PLAZA Integrative Orthologyregulation of protein metabolic process ENSG00000198833
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process AT5G50430
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress ENSG00000198833
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress ENSG00000198833
GO:0015031
IEA
PLAZA Integrative Orthologyprotein transport ENSG00000198833
GO:1903363
IEA
PLAZA Integrative Orthologynegative regulation of cellular protein catabolic process ENSG00000198833
GO:1903362
IEA
PLAZA Integrative Orthologyregulation of cellular protein catabolic process ENSG00000198833
GO:0071229
IEA
PLAZA Integrative Orthologycellular response to acid chemical AT5G50430
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT5G50430
GO:0006508
IEA
PLAZA Integrative Orthologyproteolysis AT1G17280
GO:0071462
IEA
PLAZA Integrative Orthologycellular response to water stimulus AT5G50430
GO:0006511
IEA
EggNOGmapperubiquitin-dependent protein catabolic process
GO:0006513
IEA
PLAZA Integrative Orthologyprotein monoubiquitination YER100W
GO:1901698
IEA
PLAZA Integrative Orthologyresponse to nitrogen compound YER100W
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process AT1G17280
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process ENSG00000198833
GO:1903513
IEA
PLAZA Integrative Orthologyendoplasmic reticulum to cytosol transport ENSG00000198833
GO:0090087
IEA
PLAZA Integrative Orthologyregulation of peptide transport ENSG00000198833
GO:0030162
IEA
PLAZA Integrative Orthologyregulation of proteolysis ENSG00000198833
GO:0030163
IEA
PLAZA Integrative Orthologyprotein catabolic process AT1G17280
GO:0009100
IEA
PLAZA Integrative Orthologyglycoprotein metabolic process ENSG00000198833
GO:0009101
IEA
PLAZA Integrative Orthologyglycoprotein biosynthetic process ENSG00000198833
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process ENSG00000198833
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G50430
GO:0019941
IEA
PLAZA Integrative Orthologymodification-dependent protein catabolic process AT1G17280
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress AT5G50430
GO:0048585
IEA
PLAZA Integrative Orthologynegative regulation of response to stimulus ENSG00000198833
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000198833
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process ENSG00000198833
GO:0045861
IEA
PLAZA Integrative Orthologynegative regulation of proteolysis ENSG00000198833
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process AT1G17280
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process AT1G17280
GO:1904950
IEA
PLAZA Integrative Orthologynegative regulation of establishment of protein localization ENSG00000198833
GO:0007154
IEA
PLAZA Integrative Orthologycell communication AT5G50430
GO:1904152
IEA
PLAZA Integrative Orthologyregulation of retrograde protein transport, ER to cytosol ENSG00000198833
GO:1904153
IEA
PLAZA Integrative Orthologynegative regulation of retrograde protein transport, ER to cytosol ENSG00000198833
GO:0060341
IEA
PLAZA Integrative Orthologyregulation of cellular localization ENSG00000198833
GO:0016567
IEA
EggNOGmapperprotein ubiquitination
GO:1903051
IEA
PLAZA Integrative Orthologynegative regulation of proteolysis involved in cellular protein catabolic process ENSG00000198833
GO:1903050
IEA
PLAZA Integrative Orthologyregulation of proteolysis involved in cellular protein catabolic process ENSG00000198833
GO:0030970
IEA
PLAZA Integrative Orthologyretrograde protein transport, ER to cytosol ENSG00000198833
GO:0051179
IEA
PLAZA Integrative Orthologylocalization ENSG00000198833
GO:0045184
IEA
PLAZA Integrative Orthologyestablishment of protein localization ENSG00000198833
GO:1901799
IEA
PLAZA Integrative Orthologynegative regulation of proteasomal protein catabolic process ENSG00000198833
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G50430
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process AT1G17280
GO:0051603
IEA
PLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic process AT1G17280
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus AT5G50430
GO:0018196
IEA
EggNOGmapperpeptidyl-asparagine modification
GO:0018193
IEA
PLAZA Integrative Orthologypeptidyl-amino acid modification ENSG00000198833
GO:0051049
IEA
PLAZA Integrative Orthologyregulation of transport ENSG00000198833
GO:0006886
IEA
PLAZA Integrative Orthologyintracellular protein transport ENSG00000198833
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000198833
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process ENSG00000198833
GO:0051051
IEA
PLAZA Integrative Orthologynegative regulation of transport ENSG00000198833
GO:0071702
IEA
PLAZA Integrative Orthologyorganic substance transport ENSG00000198833
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process ENSG00000198833
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000198833
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000198833
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT1G17280
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000198833
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT5G50430
GO:1901137
IEA
PLAZA Integrative Orthologycarbohydrate derivative biosynthetic process ENSG00000198833
GO:1901135
IEA
PLAZA Integrative Orthologycarbohydrate derivative metabolic process ENSG00000198833
GO:0071705
IEA
PLAZA Integrative Orthologynitrogen compound transport ENSG00000198833
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process ENSG00000198833
GO:0090317
IEA
PLAZA Integrative Orthologynegative regulation of intracellular protein transport ENSG00000198833
GO:0070862
IEA
PLAZA Integrative Orthologynegative regulation of protein exit from endoplasmic reticulum ENSG00000198833
GO:0070861
IEA
PLAZA Integrative Orthologyregulation of protein exit from endoplasmic reticulum ENSG00000198833
GO:0031330
IEA
PLAZA Integrative Orthologynegative regulation of cellular catabolic process ENSG00000198833
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process ENSG00000198833
GO:0009414
IEA
PLAZA Integrative Orthologyresponse to water deprivation AT5G50430
GO:0009415
IEA
PLAZA Integrative Orthologyresponse to water AT5G50430
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process ENSG00000198833
GO:1902456
IEA
PLAZA Integrative Orthologyregulation of stomatal opening AT5G50430
GO:0009895
IEA
PLAZA Integrative Orthologynegative regulation of catabolic process ENSG00000198833
GO:1902457
IEA
PLAZA Integrative Orthologynegative regulation of stomatal opening AT5G50430
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process ENSG00000198833
GO:0034613
IEA
PLAZA Integrative Orthologycellular protein localization ENSG00000198833
GO:0034976
IEA
PLAZA Integrative Orthologyresponse to endoplasmic reticulum stress YER100W
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT5G50430
GO:0032446
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation YER100W
GO:1904292
IEA
PLAZA Integrative Orthologyregulation of ERAD pathway ENSG00000198833
GO:1904293
IEA
PLAZA Integrative Orthologynegative regulation of ERAD pathway ENSG00000198833
GO:0051649
IEA
PLAZA Integrative Orthologyestablishment of localization in cell ENSG00000198833
GO:0018279
IEA
EggNOGmapperprotein N-linked glycosylation via asparagine
GO:0071496
IEA
PLAZA Integrative Orthologycellular response to external stimulus AT5G50430
GO:0051641
IEA
PLAZA Integrative Orthologycellular localization ENSG00000198833
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process AT5G50430
GO:0008104
IEA
PLAZA Integrative Orthologyprotein localization ENSG00000198833
GO:0070727
IEA
PLAZA Integrative Orthologycellular macromolecule localization ENSG00000198833
GO:0005975
IEA
EggNOGmappercarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019899
IEA
PLAZA Integrative Orthologyenzyme binding ENSG00000198833
GO:0004842
IEA
EggNOGmapperubiquitin-protein transferase activity
GO:0044389
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase binding ENSG00000198833
GO:0019787
IEA
PLAZA Integrative Orthologyubiquitin-like protein transferase activity AT1G17280
GO:0140096
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a protein AT1G17280
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity AT1G17280
GO:0061631
IEA
PLAZA Integrative Orthologyubiquitin conjugating enzyme activity ENSG00000198833
GO:0031625
IEA
PLAZA Integrative Orthologyubiquitin protein ligase binding ENSG00000198833
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT5G50430
GO:0061650
IEA
PLAZA Integrative Orthologyubiquitin-like protein conjugating enzyme activity ENSG00000198833
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity AT1G17280
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT5G50430
GO:0016881
IEA
EggNOGmapperacid-amino acid ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT3G17000
GO:0031984
IEA
PLAZA Integrative Orthologyorganelle subcompartment YER100W
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system AT3G17000
GO:0048471
IEA
PLAZA Integrative Orthologyperinuclear region of cytoplasm AT3G17000
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part AT3G17000
GO:0044425
IEA
PLAZA Integrative Orthologymembrane part YER100W
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YER100W
GO:0005783
IEA
PLAZA Integrative Orthologyendoplasmic reticulum AT3G17000
GO:0098827
IEA
PLAZA Integrative Orthologyendoplasmic reticulum subcompartment YER100W
GO:0005789
IEA
EggNOGmapperendoplasmic reticulum membrane
GO:0042175
IEA
EggNOGmappernuclear outer membrane-endoplasmic reticulum membrane network
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT3G17000
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular AT3G17000
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT3G17000
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YER100W
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT3G17000
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT3G17000
GO:0005623
IEA
PLAZA Integrative Orthologycell AT3G17000
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle AT3G17000
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle AT3G17000
GO:0044432
IEA
EggNOGmapperendoplasmic reticulum part
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle AT3G17000
GO:0031090
IEA
EggNOGmapperorganelle membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR000608Ubiquitin-conjugating enzyme E2

No MapMan annotations defined for this gene.
KeggID Description
K10578UBE2J1, NCUBE1, UBC6; ubiquitin-conjugating enzyme E2 J1 [EC:2.3.2.23]
No chloroplast target sequence found.