Gene: tps102080 (Thalassiosira pseudonana)

Overview top

Gene Identifier
tps102080
Transcript Identifier
tps102080.1
Gene Type
Coding gene
Location
2 : 2001277-2002332 : negative

Family Information

Homologous gene family
HOM02SEM002330
(29 genes in 14 species)
specific family

Descriptions

gene_descr
glutamate-ligase like protein
eggnog_description
glutamine synthetase

Identifiers

Type Value
pidEED95467
old_giTHAPSDRAFT_261531
UniprotB8BVI3
STRING35128.Thaps261531

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006807
IEA
InterPronitrogen compound metabolic process
GO:0090698
IEA
PLAZA Integrative Orthologypost-embryonic plant morphogenesis AT3G53180
GO:0090696
IEA
PLAZA Integrative Orthologypost-embryonic plant organ development AT3G53180
GO:0090697
IEA
PLAZA Integrative Orthologypost-embryonic plant organ morphogenesis AT3G53180
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT3G53180
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT3G53180
GO:0048364
IEA
PLAZA Integrative Orthologyroot development AT3G53180
GO:0010015
IEA
PLAZA Integrative Orthologyroot morphogenesis AT3G53180
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance AT3G53180
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT3G53180
GO:0048646
IEA
PLAZA Integrative Orthologyanatomical structure formation involved in morphogenesis AT3G53180
GO:0009725
IEA
PLAZA Integrative Orthologyresponse to hormone AT3G53180
GO:0048528
IEA
PLAZA Integrative Orthologypost-embryonic root development AT3G53180
GO:0048527
IEA
PLAZA Integrative Orthologylateral root development AT3G53180
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT3G53180
GO:0009719
IEA
PLAZA Integrative Orthologyresponse to endogenous stimulus AT3G53180
GO:0010101
IEA
PLAZA Integrative Orthologypost-embryonic root morphogenesis AT3G53180
GO:1905393
IEA
PLAZA Integrative Orthologyplant organ formation AT3G53180
GO:1905392
IEA
PLAZA Integrative Orthologyplant organ morphogenesis AT3G53180
GO:0010102
IEA
EggNOGmapperlateral root morphogenesis
GO:0043207
IEA
PLAZA Integrative Orthologyresponse to external biotic stimulus AT3G53180
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT3G53180
GO:0051707
IEA
PLAZA Integrative Orthologyresponse to other organism AT3G53180
GO:0022622
IEA
PLAZA Integrative Orthologyroot system development AT3G53180
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT3G53180
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis AT3G53180
GO:0009607
IEA
PLAZA Integrative Orthologyresponse to biotic stimulus AT3G53180
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus AT3G53180
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT3G53180
GO:0097305
IEA
PLAZA Integrative Orthologyresponse to alcohol AT3G53180
GO:0033993
IEA
PLAZA Integrative Orthologyresponse to lipid AT3G53180
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process AT3G53180
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT3G53180
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT3G53180
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT3G53180
GO:0010311
IEA
EggNOGmapperlateral root formation
GO:0048829
IEA
EggNOGmapperroot cap development
GO:0009987
IEA
PLAZA Homology (enrichment)cellular process HOM02SEM002330
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT3G53180
GO:0009617
IEA
EggNOGmapperresponse to bacterium
GO:0009737
IEA
EggNOGmapperresponse to abscisic acid
GO:0030154
IEA
EggNOGmappercell differentiation
GO:0009886
IEA
EggNOGmapperpost-embryonic animal morphogenesis
GO:0002088
IEA
EggNOGmapperlens development in camera-type eye
GO:0048645
IEA
EggNOGmapperanimal organ formation
GO:0043010
IEA
EggNOGmappercamera-type eye development
GO:0002089
IEA
EggNOGmapperlens morphogenesis in camera-type eye
GO:0048593
IEA
EggNOGmappercamera-type eye morphogenesis
GO:0048569
IEA
EggNOGmapperpost-embryonic animal organ development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004356
IEA
InterProglutamate-ammonia ligase activity
GO:0015631
IEA
PLAZA Integrative Orthologytubulin binding AT3G53180
GO:0043621
IEA
EggNOGmapperprotein self-association
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT3G53180
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT3G53180
GO:0043015
IEA
EggNOGmappergamma-tubulin binding
GO:0008017
IEA
PLAZA Integrative Orthologymicrotubule binding AT3G53180
GO:0008092
IEA
PLAZA Integrative Orthologycytoskeletal protein binding AT3G53180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005623
IEA
PLAZA Integrative Orthologycell AT3G53180
GO:0005829
IEA
EggNOGmappercytosol
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT3G53180
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT3G53180
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part AT3G53180
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular AT3G53180
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT3G53180
GO:0005884
IEA
EggNOGmapperactin filament
GO:0032991
IEA
EggNOGmapperprotein-containing complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014746Glutamine synthetase/guanido kinase, catalytic domain
IPR008146Glutamine synthetase, catalytic domain

No MapMan annotations defined for this gene.
KeggID Description
K01915glnA, GLUL; glutamine synthetase [EC:6.3.1.2]
No chloroplast target sequence found.