Gene: tho689540 (Thalassiosira oceanica)

Overview top

Gene Identifier
tho689540
Transcript Identifier
tho689540.1
Gene Type
Coding gene
Location
To_g46662 : 58-231 : positive

Family Information

Homologous gene family
HOM02SEM000010
(859 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000020
(548 genes in 26 species)
specific family

Descriptions

gene_descr
hypothetical protein
eggnog_description
dna repair and recombination protein

Identifiers

Type Value
pidEJK48305
UniprotK0R687
old_giTHAOC_32913

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006338
IEA
EggNOGmapperchromatin remodeling
GO:0035822
IEA
EggNOGmappergene conversion
GO:0000722
IEA
EggNOGmappertelomere maintenance via recombination
GO:0035825
IEA
EggNOGmapperhomologous recombination
GO:0009150
IEA
EggNOGmapperpurine ribonucleotide metabolic process
GO:0000711
IEA
EggNOGmappermeiotic DNA repair synthesis
GO:0032989
IEA
EggNOGmappercellular component morphogenesis
GO:0046034
IEA
EggNOGmapperATP metabolic process
GO:0007127
IEA
EggNOGmappermeiosis I
GO:0000733
IEA
EggNOGmapperDNA strand renaturation
GO:0010608
IEA
EggNOGmapperposttranscriptional regulation of gene expression
GO:0008298
IEA
EggNOGmapperintracellular mRNA localization
GO:0009169
IEA
EggNOGmapperpurine ribonucleoside monophosphate catabolic process
GO:2000112
IEA
EggNOGmapperregulation of cellular macromolecule biosynthetic process
GO:0006417
IEA
EggNOGmapperregulation of translation
GO:0009207
IEA
EggNOGmapperpurine ribonucleoside triphosphate catabolic process
GO:0006195
IEA
EggNOGmapperpurine nucleotide catabolic process
GO:0009154
IEA
EggNOGmapperpurine ribonucleotide catabolic process
GO:0010927
IEA
EggNOGmappercellular component assembly involved in morphogenesis
GO:0030261
IEA
EggNOGmapperchromosome condensation
GO:0043150
IEA
EggNOGmapperDNA synthesis involved in double-strand break repair via homologous recombination
GO:0006311
IEA
EggNOGmappermeiotic gene conversion
GO:0007304
IEA
EggNOGmapperchorion-containing eggshell formation
GO:0030491
IEA
EggNOGmapperheteroduplex formation
GO:0046130
IEA
EggNOGmapperpurine ribonucleoside catabolic process
GO:0007306
IEA
EggNOGmappereggshell chorion assembly
GO:0010332
IEA
EggNOGmapperresponse to gamma radiation
GO:0042493
IEA
EggNOGmapperresponse to drug
GO:0032079
IEA
EggNOGmapperpositive regulation of endodeoxyribonuclease activity
GO:0046843
IEA
EggNOGmapperdorsal appendage formation
GO:0045003
IEA
EggNOGmapperdouble-strand break repair via synthesis-dependent strand annealing
GO:0007131
IEA
EggNOGmapperreciprocal meiotic recombination
GO:0032508
IEA
EggNOGmapperDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032555
IEA
PLAZA Homology (enrichment)purine ribonucleotide binding HOM02SEM000010
GO:0030554
IEA
PLAZA Homology (enrichment)adenyl nucleotide binding HOM02SEM000010
GO:0032553
IEA
PLAZA Homology (enrichment)ribonucleotide binding HOM02SEM000010
GO:0017076
IEA
PLAZA Homology (enrichment)purine nucleotide binding HOM02SEM000010
GO:0097367
IEA
PLAZA Homology (enrichment)carbohydrate derivative binding HOM02SEM000010
GO:0097159
IEA
PLAZA Homology (enrichment)organic cyclic compound binding HOM02SEM000010
GO:0035639
IEA
PLAZA Homology (enrichment)purine ribonucleoside triphosphate binding HOM02SEM000010
GO:0032559
IEA
PLAZA Homology (enrichment)adenyl ribonucleotide binding HOM02SEM000010
GO:0005524
IEA
PLAZA Homology (enrichment)ATP binding HOM02SEM000010
GO:0000166
IEA
PLAZA Homology (enrichment)nucleotide binding HOM02SEM000010
GO:0005488
IEA
PLAZA Homology (enrichment)binding HOM02SEM000010
GO:0043168
IEA
PLAZA Homology (enrichment)anion binding HOM02SEM000010
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM000010
GO:0043167
IEA
PLAZA Homology (enrichment)ion binding HOM02SEM000010
GO:1901265
IEA
PLAZA Homology (enrichment)nucleoside phosphate binding HOM02SEM000010
GO:0008144
IEA
PLAZA Homology (enrichment)drug binding HOM02SEM000010
GO:1901363
IEA
PLAZA Homology (enrichment)heterocyclic compound binding HOM02SEM000010
GO:0036310
IEA
EggNOGmapperannealing helicase activity
GO:0015616
IEA
EggNOGmapperDNA translocase activity
GO:0008026
IEA
EggNOGmapperATP-dependent helicase activity
GO:0004003
IEA
EggNOGmapperATP-dependent DNA helicase activity
GO:0033170
IEA
EggNOGmapperprotein-DNA loading ATPase activity
GO:0003677
IEA
EggNOGmapperDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005819
IEA
EggNOGmapperspindle
GO:0015630
IEA
EggNOGmappermicrotubule cytoskeleton
GO:0005634
IEA
EggNOGmappernucleus
GO:0032991
IEA
EggNOGmapperprotein-containing complex
GO:0005737
IEA
EggNOGmappercytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
No InterPro domains detected for this gene.
No MapMan annotations defined for this gene.
KeggID Description
K10875RAD54L, RAD54; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]
K10877RAD54B; DNA repair and recombination protein RAD54B [EC:3.6.4.-]
No chloroplast target sequence found.