Gene: tho202280 (Thalassiosira oceanica)

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Gene Identifier
tho202280
Transcript Identifier
tho202280.1
Gene Type
Coding gene
Location
To_g18175 : 3871-5656 : positive

Family Information

Homologous gene family
HOM02SEM000823
(55 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM004659
(17 genes in 15 species)
specific family

Descriptions

gene_descr
hypothetical protein
eggnog_description
Glycyl-trna synthetase

Identifiers

Type Value
pidEJK63787
UniprotK0T020
old_giTHAOC_15540

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0006426
IEA
EggNOGmapperglycyl-tRNA aminoacylation
GO:0006426
IEA
InterProglycyl-tRNA aminoacylation
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000256525
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000256525
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization ENSG00000256525
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000256525
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process ENSG00000256525
GO:0006261
IEA
PLAZA Integrative OrthologyDNA-dependent DNA replication ENSG00000256525
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication ENSG00000256525
GO:0006399
IEA
EggNOGmappertRNA metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004820
IEA
EggNOGmapperglycine-tRNA ligase activity
GO:0004820
IEA
InterProglycine-tRNA ligase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000256525

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle ENSG00000256525
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion ENSG00000256525
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000256525
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix ENSG00000256525
GO:0005615
IEA
PLAZA Integrative Orthologyextracellular space ENSG00000256525
GO:0042645
IEA
PLAZA Integrative Orthologymitochondrial nucleoid ENSG00000256525
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part ENSG00000256525
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part ENSG00000256525
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part ENSG00000256525
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle ENSG00000256525
GO:0044421
IEA
PLAZA Integrative Orthologyextracellular region part ENSG00000256525
GO:0000229
IEA
PLAZA Integrative Orthologycytoplasmic chromosome ENSG00000256525
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000256525
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part ENSG00000256525
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000256525
GO:0043230
IEA
PLAZA Integrative Orthologyextracellular organelle ENSG00000256525
GO:0043231
IEA
EggNOGmapperintracellular membrane-bounded organelle
GO:0000262
IEA
PLAZA Integrative Orthologymitochondrial chromosome ENSG00000256525
GO:0070062
IEA
PLAZA Integrative Orthologyextracellular exosome ENSG00000256525
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle ENSG00000256525
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle ENSG00000256525
GO:0005576
IEA
PLAZA Integrative Orthologyextracellular region ENSG00000256525
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle ENSG00000256525
GO:0005694
IEA
PLAZA Integrative Orthologychromosome ENSG00000256525
GO:1903561
IEA
PLAZA Integrative Orthologyextracellular vesicle ENSG00000256525
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle ENSG00000256525
GO:0009295
IEA
PLAZA Integrative Orthologynucleoid ENSG00000256525
GO:0045335
IEA
EggNOGmapperphagocytic vesicle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033731Glycyl-tRNA synthetase-like core domain
IPR004154Anticodon-binding
IPR022961Glycine-tRNA ligase, bacterial
IPR027031Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002315Glycyl-tRNA synthetase
IPR006195Aminoacyl-tRNA synthetase, class II

No MapMan annotations defined for this gene.
KeggID Description
K01880GARS, glyS1; glycyl-tRNA synthetase [EC:6.1.1.14]
No chloroplast target sequence found.