Gene: tho04000 (Thalassiosira oceanica)

Overview top

Gene Identifier
tho04000
Transcript Identifier
tho04000.1
Gene Type
Coding gene
Location
To_g22877 : 2295-3920 : positive

Family Information

Homologous gene family
HOM02SEM000330
(99 genes in 25 species)
specific family
Orthologous gene family
ORTHO02SEM000323
(95 genes in 25 species)
specific family

Descriptions

gene_descr
hypothetical protein
eggnog_description
chloride channel

Identifiers

Type Value
pidEJK59670
UniprotK0S391
old_giTHAOC_20065

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
InterProtransmembrane transport
GO:0006821
IEA
EggNOGmapperchloride transport
GO:0006821
IEA
InterProchloride transport
GO:0010167
IEA
PLAZA Integrative Orthologyresponse to nitrate AT5G40890
GO:0048871
IEA
PLAZA Integrative Orthologymulticellular organismal homeostasis FBgn0051116
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT5G40890
GO:0009987
IEA
PLAZA Integrative Orthologycellular process AT5G26240
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process AT5G26240
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process ENSG00000188037
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process WBGene00000533
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G26240
GO:0030321
IEA
PLAZA Integrative Orthologytransepithelial chloride transport FBgn0051116
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT5G26240
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process WBGene00000533
GO:0010038
IEA
PLAZA Integrative Orthologyresponse to metal ion AT5G26240
GO:0032989
IEA
PLAZA Integrative Orthologycellular component morphogenesis AT5G26240
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process WBGene00000533
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process WBGene00000533
GO:0044257
IEA
PLAZA Integrative Orthologycellular protein catabolic process WBGene00000533
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT5G26240
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process WBGene00000533
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process WBGene00000533
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process WBGene00000533
GO:0016049
IEA
PLAZA Integrative Orthologycell growth AT5G26240
GO:0050801
IEA
PLAZA Integrative Orthologyion homeostasis AT5G26240
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT5G26240
GO:0070633
IEA
PLAZA Integrative Orthologytransepithelial transport FBgn0051116
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT5G26240
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process WBGene00000533
GO:0051452
IEA
PLAZA Integrative Orthologyintracellular pH reduction ENSG00000109572
GO:0051453
IEA
PLAZA Integrative Orthologyregulation of intracellular pH ENSG00000109572
GO:0098661
IEA
PLAZA Integrative Orthologyinorganic anion transmembrane transport ENSG00000188037
GO:0007588
IEA
PLAZA Integrative Orthologyexcretion ENSG00000186510
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process WBGene00000533
GO:0030104
IEA
PLAZA Integrative Orthologywater homeostasis FBgn0051116
GO:0016050
IEA
PLAZA Integrative Orthologyvesicle organization ENSG00000109572
GO:0098771
IEA
PLAZA Integrative Orthologyinorganic ion homeostasis YJR040W
GO:0098656
IEA
PLAZA Integrative Orthologyanion transmembrane transport ENSG00000188037
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process WBGene00000533
GO:0098660
IEA
PLAZA Integrative Orthologyinorganic ion transmembrane transport ENSG00000188037
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT5G40890
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process WBGene00000533
GO:0003097
IEA
PLAZA Integrative Orthologyrenal water transport FBgn0051116
GO:1902476
IEA
PLAZA Integrative Orthologychloride transmembrane transport ENSG00000188037
GO:0003091
IEA
PLAZA Integrative Orthologyrenal water homeostasis FBgn0051116
GO:0055081
IEA
PLAZA Integrative Orthologyanion homeostasis AT5G26240
GO:0055080
IEA
PLAZA Integrative Orthologycation homeostasis YJR040W
GO:0019725
IEA
PLAZA Integrative Orthologycellular homeostasis AT5G26240
GO:0055082
IEA
PLAZA Integrative Orthologycellular chemical homeostasis AT5G26240
GO:0030641
IEA
PLAZA Integrative Orthologyregulation of cellular pH ENSG00000109572
GO:0050975
IEA
EggNOGmappersensory perception of touch
GO:0055070
IEA
PLAZA Integrative Orthologycopper ion homeostasis YJR040W
GO:0055076
IEA
PLAZA Integrative Orthologytransition metal ion homeostasis YJR040W
GO:0055072
IEA
PLAZA Integrative Orthologyiron ion homeostasis YJR040W
GO:0046916
IEA
PLAZA Integrative Orthologycellular transition metal ion homeostasis YJR040W
GO:0040007
IEA
PLAZA Integrative Orthologygrowth AT5G26240
GO:0090066
IEA
PLAZA Integrative Orthologyregulation of anatomical structure size ENSG00000109572
GO:0055067
IEA
PLAZA Integrative Orthologymonovalent inorganic cation homeostasis ENSG00000109572
GO:0000902
IEA
PLAZA Integrative Orthologycell morphogenesis AT5G26240
GO:0034220
IEA
PLAZA Integrative Orthologyion transmembrane transport ENSG00000188037
GO:0055065
IEA
PLAZA Integrative Orthologymetal ion homeostasis YJR040W
GO:0010256
IEA
PLAZA Integrative Orthologyendomembrane system organization ENSG00000109572
GO:0015706
IEA
PLAZA Integrative Orthologynitrate transport AT5G40890
GO:0050954
IEA
PLAZA Integrative Orthologysensory perception of mechanical stimulus FBgn0033755
GO:0048878
IEA
PLAZA Integrative Orthologychemical homeostasis AT5G26240
GO:0009826
IEA
PLAZA Integrative Orthologyunidimensional cell growth AT5G26240
GO:0007600
IEA
PLAZA Integrative Orthologysensory perception FBgn0033755
GO:0006873
IEA
PLAZA Integrative Orthologycellular ion homeostasis AT5G26240
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000109572
GO:0006875
IEA
PLAZA Integrative Orthologycellular metal ion homeostasis YJR040W
GO:1901698
IEA
PLAZA Integrative Orthologyresponse to nitrogen compound AT5G40890
GO:0048589
IEA
PLAZA Integrative Orthologydevelopmental growth AT5G26240
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process WBGene00000533
GO:0030163
IEA
PLAZA Integrative Orthologyprotein catabolic process WBGene00000533
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G26240
GO:0050891
IEA
PLAZA Integrative Orthologymulticellular organismal water homeostasis FBgn0051116
GO:0007039
IEA
PLAZA Integrative Orthologyprotein catabolic process in the vacuole WBGene00000533
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process WBGene00000533
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process WBGene00000533
GO:0008361
IEA
PLAZA Integrative Orthologyregulation of cell size ENSG00000109572
GO:0007032
IEA
PLAZA Integrative Orthologyendosome organization ENSG00000109572
GO:0042592
IEA
PLAZA Integrative Orthologyhomeostatic process AT5G26240
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G26240
GO:0045851
IEA
PLAZA Integrative OrthologypH reduction ENSG00000109572
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process WBGene00000533
GO:0050878
IEA
PLAZA Integrative Orthologyregulation of body fluid levels FBgn0051116
GO:0050877
IEA
PLAZA Integrative Orthologynervous system process FBgn0033755
GO:0006878
IEA
PLAZA Integrative Orthologycellular copper ion homeostasis YJR040W
GO:0003008
IEA
PLAZA Integrative Orthologysystem process ENSG00000188037
GO:0006885
IEA
PLAZA Integrative Orthologyregulation of pH ENSG00000109572
GO:0006879
IEA
PLAZA Integrative Orthologycellular iron ion homeostasis YJR040W
GO:0006884
IEA
EggNOGmappercell volume homeostasis
GO:0003014
IEA
PLAZA Integrative Orthologyrenal system process FBgn0036566
GO:0003012
IEA
PLAZA Integrative Orthologymuscle system process ENSG00000188037
GO:0060560
IEA
PLAZA Integrative Orthologydevelopmental growth involved in morphogenesis AT5G26240
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process WBGene00000533
GO:0032535
IEA
PLAZA Integrative Orthologyregulation of cellular component size ENSG00000109572
GO:0042045
IEA
PLAZA Integrative Orthologyepithelial fluid transport FBgn0051116
GO:0042044
IEA
PLAZA Integrative Orthologyfluid transport FBgn0051116
GO:0071705
IEA
PLAZA Integrative Orthologynitrogen compound transport AT5G40890
GO:0035377
IEA
PLAZA Integrative Orthologytransepithelial water transport FBgn0051116
GO:0030003
IEA
PLAZA Integrative Orthologycellular cation homeostasis YJR040W
GO:0030004
IEA
PLAZA Integrative Orthologycellular monovalent inorganic cation homeostasis ENSG00000109572
GO:0030002
IEA
PLAZA Integrative Orthologycellular anion homeostasis AT5G26240
GO:0048388
IEA
PLAZA Integrative Orthologyendosomal lumen acidification ENSG00000109572
GO:0006936
IEA
PLAZA Integrative Orthologymuscle contraction ENSG00000188037
GO:0045794
IEA
PLAZA Integrative Orthologynegative regulation of cell volume ENSG00000109572
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis AT5G26240
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT5G26240
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality AT5G26240
GO:0006833
IEA
PLAZA Integrative Orthologywater transport FBgn0051116
GO:1905146
IEA
PLAZA Integrative Orthologylysosomal protein catabolic process WBGene00000533
GO:0050794
IEA
EggNOGmapperregulation of cellular process
GO:0009268
IEA
EggNOGmapperresponse to pH
GO:0034765
IEA
EggNOGmapperregulation of ion transmembrane transport
GO:0007165
IEA
EggNOGmappersignal transduction
GO:0009612
IEA
EggNOGmapperresponse to mechanical stimulus
GO:0044070
IEA
EggNOGmapperregulation of anion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
InterProion channel activity
GO:0005247
IEA
EggNOGmappervoltage-gated chloride channel activity
GO:0005247
IEA
InterProvoltage-gated chloride channel activity
GO:0015291
IEA
PLAZA Integrative Orthologysecondary active transmembrane transporter activity AT3G27170
GO:0015293
IEA
PLAZA Integrative Orthologysymporter activity AT3G27170
GO:0015294
IEA
PLAZA Integrative Orthologysolute:cation symporter activity AT3G27170
GO:0015295
IEA
PLAZA Integrative Orthologysolute:proton symporter activity AT3G27170
GO:0015296
IEA
PLAZA Integrative Orthologyanion:cation symporter activity AT3G27170
GO:0015297
IEA
PLAZA Integrative Orthologyantiporter activity ENSG00000171365
GO:0015513
IEA
PLAZA Integrative Orthologyhigh-affinity secondary active nitrite transmembrane transporter activity AT3G27170
GO:0015077
IEA
PLAZA Integrative Orthologymonovalent inorganic cation transmembrane transporter activity AT3G27170
GO:0015078
IEA
PLAZA Integrative Orthologyproton transmembrane transporter activity AT3G27170
GO:0005225
IEA
PLAZA Integrative Orthologyvolume-sensitive anion channel activity ENSG00000109572
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT5G40890
GO:0022804
IEA
PLAZA Integrative Orthologyactive transmembrane transporter activity AT3G27170
GO:0042803
IEA
PLAZA Integrative Orthologyprotein homodimerization activity ENSG00000188037
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding ENSG00000188037
GO:0030165
IEA
PLAZA Integrative OrthologyPDZ domain binding ENSG00000109572
GO:0072320
IEA
PLAZA Integrative Orthologyvolume-sensitive chloride channel activity ENSG00000109572
GO:0015112
IEA
PLAZA Integrative Orthologynitrate transmembrane transporter activity AT5G40890
GO:0008324
IEA
PLAZA Integrative Orthologycation transmembrane transporter activity AT3G27170
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT5G40890
GO:0046983
IEA
PLAZA Integrative Orthologyprotein dimerization activity ENSG00000188037
GO:0019904
IEA
PLAZA Integrative Orthologyprotein domain specific binding ENSG00000109572
GO:0046982
IEA
PLAZA Integrative Orthologyprotein heterodimerization activity ENSG00000109572
GO:0022890
IEA
PLAZA Integrative Orthologyinorganic cation transmembrane transporter activity AT3G27170
GO:0009671
IEA
PLAZA Integrative Orthologynitrate:proton symporter activity AT3G27170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0055037
IEA
PLAZA Integrative Orthologyrecycling endosome FBgn0036566
GO:0016021
IEA
EggNOGmapperintegral component of membrane
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane AT3G27170
GO:0031410
IEA
EggNOGmappercytoplasmic vesicle
GO:0005802
IEA
PLAZA Integrative Orthologytrans-Golgi network AT5G26240
GO:0097458
IEA
PLAZA Integrative Orthologyneuron part ENSG00000109572
GO:0098791
IEA
PLAZA Integrative OrthologyGolgi subcompartment AT5G26240
GO:0045335
IEA
PLAZA Integrative Orthologyphagocytic vesicle ENSG00000109572
GO:0005829
IEA
PLAZA Integrative Orthologycytosol ENSG00000171365
GO:0099503
IEA
PLAZA Integrative Orthologysecretory vesicle ENSG00000109572
GO:0045202
IEA
PLAZA Integrative Orthologysynapse ENSG00000109572
GO:0010008
IEA
EggNOGmapperendosome membrane
GO:0000322
IEA
PLAZA Integrative Orthologystorage vacuole YJR040W
GO:0000323
IEA
PLAZA Integrative Orthologylytic vacuole YJR040W
GO:0000324
IEA
PLAZA Integrative Orthologyfungal-type vacuole YJR040W
GO:0000325
IEA
PLAZA Integrative Orthologyplant-type vacuole AT3G27170
GO:0098552
IEA
PLAZA Integrative Orthologyside of membrane ENSG00000109572
GO:0009925
IEA
PLAZA Integrative Orthologybasal plasma membrane FBgn0051116
GO:0098793
IEA
PLAZA Integrative Orthologypresynapse ENSG00000109572
GO:0031984
IEA
PLAZA Integrative Orthologyorganelle subcompartment AT5G26240
GO:0031985
IEA
PLAZA Integrative OrthologyGolgi cisterna YJR040W
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle YJR040W
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle AT3G27170
GO:0098590
IEA
PLAZA Integrative Orthologyplasma membrane region FBgn0051116
GO:0009705
IEA
PLAZA Integrative Orthologyplant-type vacuole membrane AT3G27170
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system AT5G26240
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane AT3G27170
GO:0012506
IEA
PLAZA Integrative Orthologyvesicle membrane ENSG00000109572
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part AT5G26240
GO:0044425
IEA
PLAZA Integrative Orthologymembrane part ENSG00000188037
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part AT5G26240
GO:0005783
IEA
PLAZA Integrative Orthologyendoplasmic reticulum YJR040W
GO:0097708
IEA
PLAZA Integrative Orthologyintracellular vesicle YJR040W
GO:0005769
IEA
PLAZA Integrative Orthologyearly endosome ENSG00000109572
GO:0005768
IEA
PLAZA Integrative Orthologyendosome YJR040W
GO:0005887
IEA
PLAZA Integrative Orthologyintegral component of plasma membrane ENSG00000188037
GO:0070382
IEA
PLAZA Integrative Orthologyexocytic vesicle ENSG00000109572
GO:0005773
IEA
PLAZA Integrative Orthologyvacuole AT3G27170
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane AT3G27170
GO:0005770
IEA
PLAZA Integrative Orthologylate endosome ENSG00000109572
GO:0016324
IEA
PLAZA Integrative Orthologyapical plasma membrane FBgn0051116
GO:0098827
IEA
PLAZA Integrative Orthologyendoplasmic reticulum subcompartment ENSG00000073464
GO:0016323
IEA
PLAZA Integrative Orthologybasolateral plasma membrane FBgn0051116
GO:0045178
IEA
PLAZA Integrative Orthologybasal part of cell FBgn0051116
GO:0042581
IEA
PLAZA Integrative Orthologyspecific granule ENSG00000109572
GO:0045177
IEA
PLAZA Integrative Orthologyapical part of cell ENSG00000171365
GO:0005789
IEA
PLAZA Integrative Orthologyendoplasmic reticulum membrane ENSG00000073464
GO:0005797
IEA
PLAZA Integrative OrthologyGolgi medial cisterna YJR040W
GO:0005795
IEA
PLAZA Integrative OrthologyGolgi stack YJR040W
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus AT5G26240
GO:0008021
IEA
PLAZA Integrative Orthologysynaptic vesicle ENSG00000109572
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery YJR040W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT5G26240
GO:0042175
IEA
PLAZA Integrative Orthologynuclear outer membrane-endoplasmic reticulum membrane network ENSG00000073464
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular AT5G26240
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT5G26240
GO:0044456
IEA
PLAZA Integrative Orthologysynapse part ENSG00000109572
GO:0044459
IEA
PLAZA Integrative Orthologyplasma membrane part ENSG00000188037
GO:0009897
IEA
PLAZA Integrative Orthologyexternal side of plasma membrane ENSG00000109572
GO:0031224
IEA
PLAZA Integrative Orthologyintrinsic component of membrane ENSG00000188037
GO:0030133
IEA
PLAZA Integrative Orthologytransport vesicle ENSG00000109572
GO:0031226
IEA
PLAZA Integrative Orthologyintrinsic component of plasma membrane ENSG00000188037
GO:0005764
IEA
EggNOGmapperlysosome
GO:0030139
IEA
PLAZA Integrative Orthologyendocytic vesicle ENSG00000109572
GO:0005765
IEA
EggNOGmapperlysosomal membrane
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part AT5G26240
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane YJR040W
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT5G26240
GO:0030141
IEA
PLAZA Integrative Orthologysecretory granule ENSG00000109572
GO:0044440
IEA
EggNOGmapperendosomal part
GO:0098852
IEA
PLAZA Integrative Orthologylytic vacuole membrane ENSG00000171365
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT5G26240
GO:0005623
IEA
PLAZA Integrative Orthologycell AT5G26240
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle AT5G26240
GO:0044437
IEA
PLAZA Integrative Orthologyvacuolar part AT3G27170
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle AT5G26240
GO:0044433
IEA
PLAZA Integrative Orthologycytoplasmic vesicle part ENSG00000171365
GO:0044431
IEA
PLAZA Integrative OrthologyGolgi apparatus part AT5G26240
GO:0044432
IEA
PLAZA Integrative Orthologyendoplasmic reticulum part ENSG00000073464
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle AT5G26240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014743Chloride channel, core
IPR000644CBS domain
IPR001807Chloride channel, voltage gated

No MapMan annotations defined for this gene.
KeggID Description
K05015CLCN6; chloride channel 6
K05016CLCN7; chloride channel 7
No chloroplast target sequence found.