Gene: sya00G28520 (Synedra acus)

Overview top

Gene Identifier
sya00G28520
Transcript Identifier
16492
Gene Type
Coding gene
Location
scaffold01255 : 9450-10685 : positive

Family Information

Homologous gene family
HOM02SEM001901
(33 genes in 25 species)
specific family
Orthologous gene family
ORTHO02SEM001915
(33 genes in 25 species)
specific family

Descriptions

eggnog_description
tRNA methyltransferase 61 homolog

Identifiers

Type Value
GeneName16492-gene

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0039407
GO:0046331
IEA
EggNOGmapperlateral inhibition
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0039407
GO:0009987
IEA
PLAZA Integrative Orthologycellular process YJL125C
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression ENSG00000171103
GO:0090646
IEA
PLAZA Integrative Orthologymitochondrial tRNA processing ENSG00000171103
GO:0016556
IEA
PLAZA Integrative OrthologymRNA modification ENSG00000166166
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0039407
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process YJL125C
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process YJL125C
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process YJL125C
GO:0009451
IEA
PLAZA Integrative OrthologyRNA modification YJL125C
GO:0007154
IEA
PLAZA Integrative Orthologycell communication FBgn0039407
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000171103
GO:0010467
IEA
PLAZA Integrative Orthologygene expression YJL125C
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000171103
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process YJL125C
GO:0001510
IEA
PLAZA Integrative OrthologyRNA methylation YJL125C
GO:1900864
IEA
PLAZA Integrative Orthologymitochondrial RNA modification ENSG00000171103
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process YJL125C
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process YJL125C
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process YJL125C
GO:0008033
IEA
EggNOGmappertRNA processing
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process YJL125C
GO:0070525
IEA
PLAZA Integrative OrthologytRNA threonylcarbamoyladenosine metabolic process ENSG00000171103
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000171103
GO:0006400
IEA
EggNOGmappertRNA modification
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process YJL125C
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process YJL125C
GO:0045168
IEA
PLAZA Integrative Orthologycell-cell signaling involved in cell fate commitment FBgn0039407
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000171103
GO:0032259
IEA
PLAZA Integrative Orthologymethylation ENSG00000166166
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process YJL125C
GO:0045165
IEA
PLAZA Integrative Orthologycell fate commitment FBgn0039407
GO:0080009
IEA
PLAZA Integrative OrthologymRNA methylation ENSG00000166166
GO:0043414
IEA
PLAZA Integrative Orthologymacromolecule methylation YJL125C
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification YJL125C
GO:0000963
IEA
PLAZA Integrative Orthologymitochondrial RNA processing ENSG00000171103
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing YJL125C
GO:0006399
IEA
PLAZA Integrative OrthologytRNA metabolic process YJL125C
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000171103
GO:0070901
IEA
PLAZA Integrative Orthologymitochondrial tRNA methylation ENSG00000171103
GO:0070900
IEA
PLAZA Integrative Orthologymitochondrial tRNA modification ENSG00000171103
GO:0030488
IEA
EggNOGmappertRNA methylation
GO:0030488
IEA
InterProtRNA methylation
GO:0016071
IEA
PLAZA Integrative OrthologymRNA metabolic process ENSG00000166166
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YJL125C
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process YJL125C
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process ENSG00000171103
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process YJL125C
GO:0051259
IEA
PLAZA Integrative Orthologyprotein complex oligomerization ENSG00000171103
GO:0023052
IEA
PLAZA Integrative Orthologysignaling FBgn0039407
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process YJL125C
GO:0007267
IEA
PLAZA Integrative Orthologycell-cell signaling FBgn0039407
GO:0051260
IEA
PLAZA Integrative Orthologyprotein homooligomerization ENSG00000171103
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000171103
GO:0034470
IEA
PLAZA Integrative OrthologyncRNA processing YJL125C
GO:0061458
IEA
EggNOGmapperreproductive system development
GO:0006898
IEA
EggNOGmapperreceptor-mediated endocytosis
GO:0048608
IEA
EggNOGmapperreproductive structure development
GO:0040009
IEA
EggNOGmapperregulation of growth rate
GO:0040010
IEA
EggNOGmapperpositive regulation of growth rate
GO:0007548
IEA
EggNOGmappersex differentiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008649
IEA
PLAZA Integrative OrthologyrRNA methyltransferase activity ENSG00000171103
GO:0016433
IEA
PLAZA Integrative OrthologyrRNA (adenine) methyltransferase activity ENSG00000171103
GO:0061953
IEA
PLAZA Integrative OrthologymRNA (adenine-N1-)-methyltransferase activity ENSG00000166166
GO:0016429
IEA
EggNOGmappertRNA (adenine-N1-)-methyltransferase activity
GO:0016429
IEA
InterProtRNA (adenine-N1-)-methyltransferase activity
GO:0016426
IEA
PLAZA Integrative OrthologytRNA (adenine) methyltransferase activity YJL125C
GO:0016741
IEA
PLAZA Integrative Orthologytransferase activity, transferring one-carbon groups YJL125C
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity ENSG00000166166
GO:0008174
IEA
PLAZA Integrative OrthologymRNA methyltransferase activity ENSG00000166166
GO:0008175
IEA
PLAZA Integrative OrthologytRNA methyltransferase activity YJL125C
GO:0008173
IEA
PLAZA Integrative OrthologyRNA methyltransferase activity YJL125C
GO:0140098
IEA
PLAZA Integrative Orthologycatalytic activity, acting on RNA YJL125C
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity YJL125C
GO:0008168
IEA
PLAZA Integrative Orthologymethyltransferase activity ENSG00000166166
GO:0140101
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a tRNA YJL125C
GO:0140102
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a rRNA ENSG00000171103
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000171103
GO:0005488
IEA
PLAZA Integrative Orthologybinding ENSG00000171103
GO:0008757
IEA
PLAZA Integrative OrthologyS-adenosylmethionine-dependent methyltransferase activity YJL125C

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000166166
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex YJL125C
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC9G1.12
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part ENSG00000166166
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000166166
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part ENSG00000171103
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000166166
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex YJL125C
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YJL125C
GO:0005829
IEA
EggNOGmappercytosol
GO:0034708
IEA
PLAZA Integrative Orthologymethyltransferase complex YJL125C
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion ENSG00000171103
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC9G1.12
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC9G1.12
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC9G1.12
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000166166
GO:0043527
IEA
PLAZA Integrative OrthologytRNA methyltransferase complex YJL125C
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000166166
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix ENSG00000171103
GO:0005634
IEA
EggNOGmappernucleus
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part ENSG00000166166
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC9G1.12
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000166166
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC9G1.12
GO:0031515
IEA
EggNOGmappertRNA (m1A) methyltransferase complex
GO:0031515
IEA
InterProtRNA (m1A) methyltransferase complex
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC9G1.12
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC9G1.12
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC9G1.12
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC9G1.12

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14
IPR029063S-adenosyl-L-methionine-dependent methyltransferase

No MapMan annotations defined for this gene.
KeggID Description
K07442TRM61, GCD14; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
No chloroplast target sequence found.