Gene: ptri70790 (Phaeodactylum tricornutum)

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Gene Identifier
ptri70790
Transcript Identifier
ptri70790.1
Gene Type
Coding gene
Location
16 : 362218-364740 : negative

Family Information

Homologous gene family
HOM02SEM000731
(60 genes in 24 species)
specific family
Orthologous gene family
ORTHO02SEM000795
(57 genes in 24 species)
specific family

Descriptions

eggnog_description
NOP2 Sun domain family member

Identifiers

Type Value
pidPhatr3_J3334.p1
UniprotB7G664
old_giPhatr3_J3334
EMBLCM000618
prev_idPhatr2_3334

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
PLAZA Integrative Orthologymethylation YBL024W
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process YBL024W
GO:0034599
IEA
PLAZA Integrative Orthologycellular response to oxidative stress YBL024W
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus YBL024W
GO:0097237
IEA
PLAZA Integrative Orthologycellular response to toxic substance YBL024W
GO:0002946
IEA
PLAZA Integrative OrthologytRNA C5-cytosine methylation YBL024W
GO:0042493
IEA
PLAZA Integrative Orthologyresponse to drug YBL024W
GO:0043414
IEA
PLAZA Integrative Orthologymacromolecule methylation YBL024W
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress YBL024W
GO:0009987
IEA
PLAZA Integrative Orthologycellular process YBL024W
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification YBL024W
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing YBL024W
GO:0006399
IEA
PLAZA Integrative OrthologytRNA metabolic process YBL024W
GO:0035690
IEA
PLAZA Integrative Orthologycellular response to drug YBL024W
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0026079
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus YBL024W
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance YBL024W
GO:0030488
IEA
PLAZA Integrative OrthologytRNA methylation YBL024W
GO:0071236
IEA
PLAZA Integrative Orthologycellular response to antibiotic YBL024W
GO:0070301
IEA
PLAZA Integrative Orthologycellular response to hydrogen peroxide YBL024W
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process YBL024W
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress YBL024W
GO:0050890
IEA
PLAZA Integrative Orthologycognition FBgn0026079
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process YBL024W
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YBL024W
GO:0006979
IEA
PLAZA Integrative Orthologyresponse to oxidative stress YBL024W
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process YBL024W
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process YBL024W
GO:0002101
IEA
PLAZA Integrative OrthologytRNA wobble cytosine modification YBL024W
GO:0046677
IEA
PLAZA Integrative Orthologyresponse to antibiotic YBL024W
GO:0009451
IEA
PLAZA Integrative OrthologyRNA modification YBL024W
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process YBL024W
GO:0034614
IEA
PLAZA Integrative Orthologycellular response to reactive oxygen species YBL024W
GO:0010467
IEA
PLAZA Integrative Orthologygene expression YBL024W
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process YBL024W
GO:0007614
IEA
PLAZA Integrative Orthologyshort-term memory FBgn0026079
GO:0002127
IEA
PLAZA Integrative OrthologytRNA wobble base cytosine methylation YBL024W
GO:0001510
IEA
PLAZA Integrative OrthologyRNA methylation YBL024W
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process YBL024W
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process YBL024W
GO:0000302
IEA
PLAZA Integrative Orthologyresponse to reactive oxygen species YBL024W
GO:0042542
IEA
PLAZA Integrative Orthologyresponse to hydrogen peroxide YBL024W
GO:0002097
IEA
PLAZA Integrative OrthologytRNA wobble base modification YBL024W
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical YBL024W
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process YBL024W
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process YBL024W
GO:0008033
IEA
PLAZA Integrative OrthologytRNA processing YBL024W
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process YBL024W
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus YBL024W
GO:0050877
IEA
PLAZA Integrative Orthologynervous system process FBgn0026079
GO:0003008
IEA
PLAZA Integrative Orthologysystem process FBgn0026079
GO:0007611
IEA
PLAZA Integrative Orthologylearning or memory FBgn0026079
GO:0007610
IEA
PLAZA Integrative Orthologybehavior FBgn0026079
GO:0006400
IEA
PLAZA Integrative OrthologytRNA modification YBL024W
GO:0007613
IEA
PLAZA Integrative Orthologymemory FBgn0026079
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound YBL024W
GO:0009636
IEA
PLAZA Integrative Orthologyresponse to toxic substance YBL024W
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process YBL024W
GO:1901701
IEA
PLAZA Integrative Orthologycellular response to oxygen-containing compound YBL024W
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process YBL024W
GO:0034470
IEA
PLAZA Integrative OrthologyncRNA processing YBL024W

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016428
IEA
InterProtRNA (cytosine-5-)-methyltransferase activity
GO:0003723
IEA
InterProRNA binding
GO:0000049
IEA
PLAZA Integrative OrthologytRNA binding YBL024W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000037474
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC17D4.04
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC17D4.04
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC17D4.04
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part ENSG00000037474
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC17D4.04
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000037474
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000037474
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000037474
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus ENSG00000037474
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000037474
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC17D4.04
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part ENSG00000037474
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC17D4.04
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle ENSG00000037474
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000037474
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC17D4.04
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC17D4.04
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC17D4.04
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC17D4.04
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle ENSG00000037474
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC17D4.04
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC17D4.04

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029063S-adenosyl-L-methionine-dependent methyltransferase
IPR001678SAM-dependent methyltransferase RsmB/NOP2-type
IPR023267RNA (C5-cytosine) methyltransferase
IPR023270tRNA (C5-cytosine) methyltransferase, NCL1
IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site

No MapMan annotations defined for this gene.
KeggID Description
K15335NSUN2, TRM4; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
No chloroplast target sequence found.