Gene: pte600420 (Paramecium tetraurelia)

Overview top

Gene Identifier
pte600420
Transcript Identifier
pte600420.1
Gene Type
Coding gene
Location
GCA_000165425.1:CT868152 : 184682-186144 : positive

Family Information

Homologous gene family
HOM02SEM000595
(68 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000727
(60 genes in 26 species)
specific family
Duplication type
Block duplicate

Descriptions

Identifiers

Type Value
old_giGSPATT00009630001
UniprotA0CR98
pidCAK73315

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process WBGene00005663
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process WBGene00005663
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process YDR023W
GO:0006357
IEA
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II WBGene00005663
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT1G11870
GO:0009987
IEA
PLAZA Integrative Orthologycellular process AT1G11870
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT1G11870
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT5G27470
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated WBGene00005663
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT1G11870
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process YDR023W
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process YDR023W
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated WBGene00005663
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YHR011W
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process YDR023W
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT1G11870
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G27470
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT1G11870
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G27470
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process AT1G11870
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process WBGene00005663
GO:0010038
IEA
PLAZA Integrative Orthologyresponse to metal ion AT5G27470
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process WBGene00005663
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT1G11870
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process YDR023W
GO:0000122
IEA
PLAZA Integrative Orthologynegative regulation of transcription by RNA polymerase II WBGene00005663
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT1G11870
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription WBGene00005663
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription WBGene00005663
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process YDR023W
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process YDR023W
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process YDR023W
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process AT1G11870
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT1G11870
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT1G11870
GO:0043603
IEA
PLAZA Integrative Orthologycellular amide metabolic process YDR023W
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process YDR023W
GO:0043604
IEA
PLAZA Integrative Orthologyamide biosynthetic process YDR023W
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process WBGene00005663
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT1G11870
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process WBGene00005663
GO:0010467
IEA
PLAZA Integrative Orthologygene expression YDR023W
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression WBGene00005663
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT1G11870
GO:0043043
IEA
PLAZA Integrative Orthologypeptide biosynthetic process YDR023W
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT1G11870
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT1G11870
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression WBGene00005663
GO:0006412
IEA
PLAZA Integrative Orthologytranslation ENSG00000104835
GO:0043436
IEA
PLAZA Integrative Orthologyoxoacid metabolic process AT1G11870
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process WBGene00005663
GO:0043038
IEA
PLAZA Integrative Orthologyamino acid activation AT1G11870
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process AT1G11870
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process YDR023W
GO:0043039
IEA
PLAZA Integrative OrthologytRNA aminoacylation AT1G11870
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G27470
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process AT1G11870
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process AT1G11870
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT1G11870
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process WBGene00005663
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process AT1G11870
GO:0070127
IEA
PLAZA Integrative OrthologytRNA aminoacylation for mitochondrial protein translation YHR011W
GO:0006518
IEA
PLAZA Integrative Orthologypeptide metabolic process YDR023W
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT1G11870
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT1G11870
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT1G11870
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT1G11870
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT1G11870
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process WBGene00005663
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II WBGene00005663
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT1G11870
GO:0006520
IEA
PLAZA Integrative Orthologycellular amino acid metabolic process AT1G11870
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process WBGene00005663
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT1G11870
GO:0006082
IEA
PLAZA Integrative Orthologyorganic acid metabolic process AT1G11870
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process WBGene00005663
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process WBGene00005663
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process WBGene00005663
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process WBGene00005663
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT1G11870
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process WBGene00005663
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process WBGene00005663
GO:0006434
IEA
PLAZA Integrative Orthologyseryl-tRNA aminoacylation YDR023W
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization AT1G11870
GO:0048827
IEA
PLAZA Integrative Orthologyphyllome development AT1G11870
GO:0006399
IEA
PLAZA Integrative OrthologytRNA metabolic process AT1G11870
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT1G11870
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process WBGene00005663
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process WBGene00005663
GO:0032543
IEA
PLAZA Integrative Orthologymitochondrial translation YHR011W
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT1G11870
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process WBGene00005663
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process AT1G11870
GO:0006418
IEA
PLAZA Integrative OrthologytRNA aminoacylation for protein translation YDR023W
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process AT1G11870
GO:0009657
IEA
PLAZA Integrative Orthologyplastid organization AT1G11870
GO:0009658
IEA
PLAZA Integrative Orthologychloroplast organization AT1G11870
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process WBGene00005663
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process WBGene00005663
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process WBGene00005663
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YHR011W
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process AT1G11870
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process WBGene00005663
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription WBGene00005663
GO:0070158
IEA
PLAZA Integrative Orthologymitochondrial seryl-tRNA aminoacylation YHR011W
GO:0019752
IEA
PLAZA Integrative Orthologycarboxylic acid metabolic process AT1G11870
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process WBGene00005663
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process WBGene00005663
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process AT1G11870
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process WBGene00005663
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process WBGene00005663
GO:0035670
IEA
PLAZA Integrative Orthologyplant-type ovary development AT1G11870
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation WBGene00005663
GO:0048481
IEA
PLAZA Integrative Orthologyplant ovule development AT1G11870
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process WBGene00005663
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process WBGene00005663
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT1G11870
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated WBGene00005663
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process WBGene00005663
GO:0044281
IEA
PLAZA Integrative Orthologysmall molecule metabolic process AT1G11870
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process WBGene00005663
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT1G11870
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process WBGene00005663
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT1G11870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030554
IEA
PLAZA Integrative Orthologyadenyl nucleotide binding FBgn0031497
GO:0017076
IEA
PLAZA Integrative Orthologypurine nucleotide binding FBgn0031497
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding ENSG00000104835
GO:0005524
IEA
PLAZA Integrative OrthologyATP binding FBgn0031497
GO:0043168
IEA
PLAZA Integrative Orthologyanion binding FBgn0031497
GO:0043167
IEA
PLAZA Integrative Orthologyion binding FBgn0031497
GO:0035639
IEA
PLAZA Integrative Orthologypurine ribonucleoside triphosphate binding FBgn0031497
GO:1901265
IEA
PLAZA Integrative Orthologynucleoside phosphate binding FBgn0031497
GO:0008144
IEA
PLAZA Integrative Orthologydrug binding FBgn0031497
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding ENSG00000104835
GO:0016875
IEA
PLAZA Integrative Orthologyligase activity, forming carbon-oxygen bonds YDR023W
GO:0016874
IEA
PLAZA Integrative Orthologyligase activity ENSG00000104835
GO:0140098
IEA
PLAZA Integrative Orthologycatalytic activity, acting on RNA YDR023W
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity YDR023W
GO:0000166
IEA
PLAZA Integrative Orthologynucleotide binding FBgn0031497
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding ENSG00000104835
GO:0140101
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a tRNA YDR023W
GO:0032555
IEA
PLAZA Integrative Orthologypurine ribonucleotide binding FBgn0031497
GO:0004828
IEA
PLAZA Integrative Orthologyserine-tRNA ligase activity YDR023W
GO:0032553
IEA
PLAZA Integrative Orthologyribonucleotide binding FBgn0031497
GO:0032559
IEA
PLAZA Integrative Orthologyadenyl ribonucleotide binding FBgn0031497
GO:0005488
IEA
PLAZA Integrative Orthologybinding ENSG00000104835
GO:0097367
IEA
PLAZA Integrative Orthologycarbohydrate derivative binding FBgn0031497
GO:0003723
IEA
PLAZA Integrative OrthologyRNA binding ENSG00000104835
GO:0004812
IEA
PLAZA Integrative Orthologyaminoacyl-tRNA ligase activity YDR023W
GO:0036094
IEA
PLAZA Integrative Orthologysmall molecule binding FBgn0031497

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC25B8.06c
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC25B8.06c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC25B8.06c
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPAC25B8.06c
GO:1990904
IEA
PLAZA Integrative Orthologyribonucleoprotein complex YDR023W
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YDR023W
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC29A4.15
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT1G11870
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion SPAC25B8.06c
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC25B8.06c
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC25B8.06c
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC25B8.06c
GO:0010494
IEA
PLAZA Integrative Orthologycytoplasmic stress granule YDR023W
GO:0036464
IEA
PLAZA Integrative Orthologycytoplasmic ribonucleoprotein granule YDR023W
GO:0035770
IEA
PLAZA Integrative Orthologyribonucleoprotein granule YDR023W
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC25B8.06c
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT1G11870
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix SPAC25B8.06c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC25B8.06c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC25B8.06c
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle YDR023W
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC25B8.06c
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC25B8.06c
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC25B8.06c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC25B8.06c
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle YDR023W
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC25B8.06c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC25B8.06c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002314Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002317Serine-tRNA ligase, type1
IPR006195Aminoacyl-tRNA synthetase, class II
IPR010978Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm
IPR015866Serine-tRNA synthetase, type1, N-terminal

No MapMan annotations defined for this gene.
KeggID Description
K01875SARS, serS; seryl-tRNA synthetase [EC:6.1.1.11]
K14291PHAX; phosphorylated adapter RNA export protein
No chloroplast target sequence found.