Gene: ps00G84740 (Pseudo-nitzschia multiseries)

Overview top

Gene Identifier
ps00G84740
Transcript Identifier
ps00G84740.1
Gene Type
Coding gene
Location
scaffold_2591 : 4720-7834 : negative

Family Information

Homologous gene family
HOM02SEM000336
(99 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM002435
(29 genes in 25 species)
specific family

Descriptions

eggnog_description
Glutamyl-tRNA synthetase

Identifiers

Type Value
GeneNamefgenesh1_pg
pid293526
transcriptId293869

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006424
IEA
EggNOGmapperglutamyl-tRNA aminoacylation
GO:0006424
IEA
InterProglutamyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0051351
IEA
PLAZA Integrative Orthologypositive regulation of ligase activity YGL105W
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT5G64050
GO:0007005
IEA
EggNOGmappermitochondrion organization
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT5G64050
GO:0048827
IEA
PLAZA Integrative Orthologyphyllome development AT5G64050
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT5G64050
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression YOL033W
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT5G64050
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT5G64050
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT5G64050
GO:0070149
IEA
PLAZA Integrative Orthologymitochondrial glutamyl-tRNA aminoacylation YOL033W
GO:0032543
IEA
PLAZA Integrative Orthologymitochondrial translation YOL033W
GO:0051340
IEA
PLAZA Integrative Orthologyregulation of ligase activity YGL105W
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT5G64050
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT5G64050
GO:0009657
IEA
PLAZA Integrative Orthologyplastid organization AT5G64050
GO:0009658
IEA
EggNOGmapperchloroplast organization
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT5G64050
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT5G64050
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YOL033W
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT5G64050
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT5G64050
GO:0043085
IEA
PLAZA Integrative Orthologypositive regulation of catalytic activity YGL105W
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT5G64050
GO:0044093
IEA
PLAZA Integrative Orthologypositive regulation of molecular function YGL105W
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function YGL105W
GO:0035670
IEA
EggNOGmapperplant-type ovary development
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT5G64050
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation YGL105W
GO:0048481
IEA
EggNOGmapperplant ovule development
GO:0070127
IEA
EggNOGmappertRNA aminoacylation for mitochondrial protein translation
GO:0050790
IEA
PLAZA Integrative Orthologyregulation of catalytic activity YGL105W
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT5G64050
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT5G64050
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT5G64050
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT5G64050
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT5G64050
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT5G64050
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT5G64050
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT5G64050
GO:0006898
IEA
EggNOGmapperreceptor-mediated endocytosis
GO:0040009
IEA
EggNOGmapperregulation of growth rate
GO:0040010
IEA
EggNOGmapperpositive regulation of growth rate
GO:0009790
IEA
EggNOGmapperembryo development
GO:0002119
IEA
EggNOGmappernematode larval development
GO:0048569
IEA
EggNOGmapperpost-embryonic animal organ development

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0004818
IEA
EggNOGmapperglutamate-tRNA ligase activity
GO:0004818
IEA
InterProglutamate-tRNA ligase activity
GO:0000049
IEA
InterProtRNA binding
GO:0030234
IEA
PLAZA Integrative Orthologyenzyme regulator activity YGL105W
GO:1902936
IEA
PLAZA Integrative Orthologyphosphatidylinositol bisphosphate binding YGL105W
GO:0005543
IEA
PLAZA Integrative Orthologyphospholipid binding YGL105W
GO:0035091
IEA
PLAZA Integrative Orthologyphosphatidylinositol binding YGL105W
GO:0032266
IEA
PLAZA Integrative Orthologyphosphatidylinositol-3-phosphate binding YGL105W
GO:0008047
IEA
PLAZA Integrative Orthologyenzyme activator activity YGL105W
GO:0008289
IEA
PLAZA Integrative Orthologylipid binding YGL105W
GO:0050561
IEA
EggNOGmapperglutamate-tRNA(Gln) ligase activity
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding SPAPB1A10.11c
GO:0080025
IEA
PLAZA Integrative Orthologyphosphatidylinositol-3,5-bisphosphate binding YGL105W
GO:0098772
IEA
PLAZA Integrative Orthologymolecular function regulator YGL105W
GO:1901981
IEA
PLAZA Integrative Orthologyphosphatidylinositol phosphate binding YGL105W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
InterProcytoplasm
GO:0005739
IEA
EggNOGmappermitochondrion
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAPB1A10.11c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAPB1A10.11c
GO:0055044
IEA
PLAZA Integrative Orthologysymplast AT2G40660
GO:0010494
IEA
PLAZA Integrative Orthologycytoplasmic stress granule YGL105W
GO:0036464
IEA
PLAZA Integrative Orthologycytoplasmic ribonucleoprotein granule YGL105W
GO:0035770
IEA
PLAZA Integrative Orthologyribonucleoprotein granule YGL105W
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPAPB1A10.11c
GO:1990904
IEA
PLAZA Integrative Orthologyribonucleoprotein complex YGL105W
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAPB1A10.11c
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT5G64050
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT5G64050
GO:0009570
IEA
EggNOGmapperchloroplast stroma
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YGL105W
GO:0030054
IEA
PLAZA Integrative Orthologycell junction AT2G40660
GO:0005759
IEA
EggNOGmappermitochondrial matrix
GO:0005911
IEA
PLAZA Integrative Orthologycell-cell junction AT2G40660
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAPB1A10.11c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAPB1A10.11c
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle YGL105W
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAPB1A10.11c
GO:0017102
IEA
PLAZA Integrative Orthologymethionyl glutamyl tRNA synthetase complex YGL105W
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT2G40660
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAPB1A10.11c
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT2G40660
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT5G64050
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAPB1A10.11c
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle YGL105W
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT5G64050
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAPB1A10.11c
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT5G64050
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAPB1A10.11c
GO:0020011
IEA
EggNOGmapperapicoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033910Glutamyl-tRNA synthetase
IPR020751Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR020061Glutamine-tRNA ligase, alpha-bundle domain superfamily
IPR004527Glutamate-tRNA ligase, bacterial/mitochondrial
IPR002547tRNA-binding domain
IPR020058Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
IPR000924Glutamyl/glutaminyl-tRNA synthetase
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR012340Nucleic acid-binding, OB-fold
IPR008925Aminoacyl-tRNA synthetase, class I, anticodon-binding

No MapMan annotations defined for this gene.
KeggID Description
K01885EARS, gltX; glutamyl-tRNA synthetase [EC:6.1.1.17]
K09698gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
K18752TNPO1, IPO2, KPNB2; transportin-1
Cleavage position Sequence
18 RFAMAFVRPSSTFSGKKAAPAAVGA