Gene: gene14810 (Fragilariopsis cylindrus)

Overview top

Gene Identifier
gene14810
Transcript Identifier
184277
Gene Type
Coding gene
Location
scaffold_5 : 1221881-1223227 : positive

Family Information

Homologous gene family
HOM02SEM002910
(26 genes in 20 species)
specific family
Orthologous gene family
ORTHO02SEM003062
(26 genes in 20 species)
specific family
Duplication type
Tandem duplicate

Descriptions

eggnog_description
DEP domain containing 5

Identifiers

Type Value
tid184277
idmRNA14813
GeneNamegene14810

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process SPBC26H8.04c
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0035227
GO:0048477
IEA
PLAZA Integrative Orthologyoogenesis FBgn0035227
GO:0022412
IEA
PLAZA Integrative Orthologycellular process involved in reproduction in multicellular organism FBgn0035227
GO:0006995
IEA
PLAZA Integrative Orthologycellular response to nitrogen starvation SPBC26H8.04c
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0035227
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction FBgn0035227
GO:0009987
IEA
PLAZA Integrative Orthologycellular process SPBC26H8.04c
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization YJR138W
GO:0048468
IEA
PLAZA Integrative Orthologycell development FBgn0035227
GO:0031929
IEA
PLAZA Integrative OrthologyTOR signaling SPBC26H8.04c
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process FBgn0035227
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction SPBC26H8.04c
GO:0044703
IEA
PLAZA Integrative Orthologymulti-organism reproductive process FBgn0035227
GO:0007282
IEA
PLAZA Integrative Orthologycystoblast division FBgn0035227
GO:0007281
IEA
PLAZA Integrative Orthologygerm cell development FBgn0035227
GO:0038202
IEA
PLAZA Integrative OrthologyTORC1 signaling SPBC26H8.04c
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0035227
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus SPBC26H8.04c
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0035227
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress SPBC26H8.04c
GO:0048585
IEA
PLAZA Integrative Orthologynegative regulation of response to stimulus SPBC26H8.04c
GO:0030727
IEA
PLAZA Integrative Orthologygermarium-derived female germ-line cyst formation FBgn0035227
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus SPBC26H8.04c
GO:0009968
IEA
PLAZA Integrative Orthologynegative regulation of signal transduction SPBC26H8.04c
GO:0032504
IEA
PLAZA Integrative Orthologymulticellular organism reproduction FBgn0035227
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus SPBC26H8.04c
GO:0051345
IEA
PLAZA Integrative Orthologypositive regulation of hydrolase activity YJR138W
GO:0007276
IEA
PLAZA Integrative Orthologygamete generation FBgn0035227
GO:1902532
IEA
PLAZA Integrative Orthologynegative regulation of intracellular signal transduction SPBC26H8.04c
GO:0043562
IEA
PLAZA Integrative Orthologycellular response to nitrogen levels SPBC26H8.04c
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0035227
GO:0042594
IEA
PLAZA Integrative Orthologyresponse to starvation SPBC26H8.04c
GO:0008361
IEA
PLAZA Integrative Orthologyregulation of cell size FBgn0035227
GO:0033043
IEA
PLAZA Integrative Orthologyregulation of organelle organization YJR138W
GO:0007033
IEA
PLAZA Integrative Orthologyvacuole organization YJR138W
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process YJR138W
GO:1902531
IEA
PLAZA Integrative Orthologyregulation of intracellular signal transduction SPBC26H8.04c
GO:0007154
IEA
PLAZA Integrative Orthologycell communication SPBC26H8.04c
GO:0051336
IEA
PLAZA Integrative Orthologyregulation of hydrolase activity YJR138W
GO:0031667
IEA
PLAZA Integrative Orthologyresponse to nutrient levels SPBC26H8.04c
GO:0019953
IEA
PLAZA Integrative Orthologysexual reproduction FBgn0035227
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YJR138W
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YJR138W
GO:0010506
IEA
PLAZA Integrative Orthologyregulation of autophagy YJR138W
GO:0051056
IEA
PLAZA Integrative Orthologyregulation of small GTPase mediated signal transduction YJR138W
GO:0051058
IEA
PLAZA Integrative Orthologynegative regulation of small GTPase mediated signal transduction YJR138W
GO:0031669
IEA
PLAZA Integrative Orthologycellular response to nutrient levels SPBC26H8.04c
GO:0031668
IEA
PLAZA Integrative Orthologycellular response to extracellular stimulus SPBC26H8.04c
GO:0010508
IEA
PLAZA Integrative Orthologypositive regulation of autophagy YJR138W
GO:0044093
IEA
PLAZA Integrative Orthologypositive regulation of molecular function YJR138W
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process YJR138W
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process YJR138W
GO:1904262
IEA
PLAZA Integrative Orthologynegative regulation of TORC1 signaling SPBC26H8.04c
GO:0048609
IEA
PLAZA Integrative Orthologymulticellular organismal reproductive process FBgn0035227
GO:0032006
IEA
PLAZA Integrative Orthologyregulation of TOR signaling SPBC26H8.04c
GO:0032007
IEA
PLAZA Integrative Orthologynegative regulation of TOR signaling SPBC26H8.04c
GO:0044088
IEA
EggNOGmapperregulation of vacuole organization
GO:0006914
IEA
PLAZA Integrative Orthologyautophagy YJR138W
GO:0044087
IEA
PLAZA Integrative Orthologyregulation of cellular component biogenesis YJR138W
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis YJR138W
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction FBgn0035227
GO:0043547
IEA
EggNOGmapperpositive regulation of GTPase activity
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process YJR138W
GO:1902115
IEA
PLAZA Integrative Orthologyregulation of organelle assembly YJR138W
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly YJR138W
GO:0009991
IEA
PLAZA Integrative Orthologyresponse to extracellular stimulus SPBC26H8.04c
GO:0070925
IEA
PLAZA Integrative Orthologyorganelle assembly YJR138W
GO:0007293
IEA
PLAZA Integrative Orthologygermarium-derived egg chamber formation FBgn0035227
GO:0007292
IEA
PLAZA Integrative Orthologyfemale gamete generation FBgn0035227
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process YJR138W
GO:0032535
IEA
PLAZA Integrative Orthologyregulation of cellular component size FBgn0035227
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process YJR138W
GO:0010646
IEA
EggNOGmapperregulation of cell communication
GO:2000785
IEA
EggNOGmapperregulation of autophagosome assembly
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus SPBC26H8.04c
GO:0010648
IEA
PLAZA Integrative Orthologynegative regulation of cell communication SPBC26H8.04c
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process YJR138W
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress SPBC26H8.04c
GO:0009267
IEA
PLAZA Integrative Orthologycellular response to starvation SPBC26H8.04c
GO:1903432
IEA
PLAZA Integrative Orthologyregulation of TORC1 signaling SPBC26H8.04c
GO:0016236
IEA
PLAZA Integrative Orthologymacroautophagy YJR138W
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process FBgn0035227
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process YJR138W
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process YJR138W
GO:0045792
IEA
PLAZA Integrative Orthologynegative regulation of cell size FBgn0035227
GO:0048142
IEA
PLAZA Integrative Orthologygermarium-derived cystoblast division FBgn0035227
GO:0051301
IEA
PLAZA Integrative Orthologycell division FBgn0035227
GO:0000045
IEA
PLAZA Integrative Orthologyautophagosome assembly YJR138W
GO:0061919
IEA
PLAZA Integrative Orthologyprocess utilizing autophagic mechanism YJR138W
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process YJR138W
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis FBgn0035227
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process YJR138W
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process YJR138W
GO:0008283
IEA
PLAZA Integrative Orthologycell proliferation FBgn0035227
GO:0016241
IEA
EggNOGmapperregulation of macroautophagy
GO:0048134
IEA
PLAZA Integrative Orthologygerm-line cyst formation FBgn0035227
GO:0043087
IEA
PLAZA Integrative Orthologyregulation of GTPase activity YJR138W
GO:0023052
IEA
PLAZA Integrative Orthologysignaling SPBC26H8.04c
GO:0048135
IEA
PLAZA Integrative Orthologyfemale germ-line cyst formation FBgn0035227
GO:0043085
IEA
PLAZA Integrative Orthologypositive regulation of catalytic activity YJR138W
GO:0023051
IEA
PLAZA Integrative Orthologyregulation of signaling SPBC26H8.04c
GO:0023057
IEA
PLAZA Integrative Orthologynegative regulation of signaling SPBC26H8.04c
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function YJR138W
GO:0009966
IEA
PLAZA Integrative Orthologyregulation of signal transduction SPBC26H8.04c
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process SPBC26H8.04c
GO:0090066
IEA
PLAZA Integrative Orthologyregulation of anatomical structure size FBgn0035227
GO:0048646
IEA
PLAZA Integrative Orthologyanatomical structure formation involved in morphogenesis FBgn0035227
GO:0008356
IEA
PLAZA Integrative Orthologyasymmetric cell division FBgn0035227
GO:1905037
IEA
PLAZA Integrative Orthologyautophagosome organization YJR138W
GO:0007264
IEA
PLAZA Integrative Orthologysmall GTPase mediated signal transduction YJR138W
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality FBgn0035227
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation SPBC26H8.04c
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization YJR138W
GO:0035556
IEA
PLAZA Integrative Orthologyintracellular signal transduction FBgn0035227
GO:1990928
IEA
PLAZA Integrative Orthologyresponse to amino acid starvation ENSG00000100150
GO:0050790
IEA
PLAZA Integrative Orthologyregulation of catalytic activity YJR138W
GO:0071496
IEA
PLAZA Integrative Orthologycellular response to external stimulus SPBC26H8.04c
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process YJR138W
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process SPBC26H8.04c
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process YJR138W
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process SPBC26H8.04c
GO:0034198
IEA
PLAZA Integrative Orthologycellular response to amino acid starvation ENSG00000100150
GO:0033121
IEA
EggNOGmapperregulation of purine nucleotide catabolic process
GO:0080134
IEA
EggNOGmapperregulation of response to stress
GO:0032107
IEA
EggNOGmapperregulation of response to nutrient levels
GO:0080135
IEA
EggNOGmapperregulation of cellular response to stress
GO:0009118
IEA
EggNOGmapperregulation of nucleoside metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060589
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase regulator activity SPBC26H8.04c
GO:0005096
IEA
EggNOGmapperGTPase activator activity
GO:0030695
IEA
PLAZA Integrative OrthologyGTPase regulator activity SPBC26H8.04c
GO:0098772
IEA
PLAZA Integrative Orthologymolecular function regulator SPBC26H8.04c
GO:0044877
IEA
PLAZA Integrative Orthologyprotein-containing complex binding ENSG00000100150
GO:0030234
IEA
PLAZA Integrative Orthologyenzyme regulator activity SPBC26H8.04c
GO:0008047
IEA
PLAZA Integrative Orthologyenzyme activator activity SPBC26H8.04c
GO:0005488
IEA
PLAZA Integrative Orthologybinding ENSG00000100150

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane SPBC26H8.04c
GO:0019898
IEA
PLAZA Integrative Orthologyextrinsic component of membrane YJR138W
GO:0016020
IEA
PLAZA Integrative Orthologymembrane SPBC26H8.04c
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex ENSG00000100150
GO:0097042
IEA
EggNOGmapperextrinsic component of fungal-type vacuolar membrane
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPBC26H8.04c
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane SPBC26H8.04c
GO:0044425
IEA
PLAZA Integrative Orthologymembrane part YJR138W
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPBC26H8.04c
GO:0035859
IEA
PLAZA Integrative OrthologySeh1-associated complex SPBC26H8.04c
GO:0005773
IEA
PLAZA Integrative Orthologyvacuole YJR138W
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane SPBC26H8.04c
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex ENSG00000100150
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPBC26H8.04c
GO:0000151
IEA
PLAZA Integrative Orthologyubiquitin ligase complex ENSG00000100150
GO:0000306
IEA
PLAZA Integrative Orthologyextrinsic component of vacuolar membrane YJR138W
GO:0031312
IEA
PLAZA Integrative Orthologyextrinsic component of organelle membrane YJR138W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPBC26H8.04c
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPBC26H8.04c
GO:0000322
IEA
PLAZA Integrative Orthologystorage vacuole SPBC26H8.04c
GO:0000323
IEA
PLAZA Integrative Orthologylytic vacuole SPBC26H8.04c
GO:0000324
IEA
EggNOGmapperfungal-type vacuole
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPBC26H8.04c
GO:0000329
IEA
PLAZA Integrative Orthologyfungal-type vacuole membrane SPBC26H8.04c
GO:0031461
IEA
PLAZA Integrative Orthologycullin-RING ubiquitin ligase complex ENSG00000100150
GO:0031463
IEA
PLAZA Integrative OrthologyCul3-RING ubiquitin ligase complex ENSG00000100150
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle SPBC26H8.04c
GO:0005764
IEA
PLAZA Integrative Orthologylysosome ENSG00000100150
GO:0005765
IEA
PLAZA Integrative Orthologylysosomal membrane ENSG00000100150
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPBC26H8.04c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC26H8.04c
GO:0098852
IEA
PLAZA Integrative Orthologylytic vacuole membrane SPBC26H8.04c
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC26H8.04c
GO:0005623
IEA
PLAZA Integrative Orthologycell SPBC26H8.04c
GO:0044437
IEA
PLAZA Integrative Orthologyvacuolar part SPBC26H8.04c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC26H8.04c
GO:1990130
IEA
EggNOGmapperGATOR1 complex
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC26H8.04c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC26H8.04c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027244Vacuolar membrane-associated protein Iml1

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.