Gene: emh315000 (Emiliania huxleyi)

Overview top

Gene Identifier
emh315000
Transcript Identifier
emh315000.1
Gene Type
Coding gene
Location
KB864594 : 78637-82096 : positive

Family Information

Homologous gene family
HOM02SEM000696
(61 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000846
(55 genes in 26 species)
specific family

Descriptions

gene_descr
putative Lysyl-tRNA synthetase

Identifiers

Type Value
pidEOD31631
old_giEMIHUDRAFT_456253
UniprotR1F8A9

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044271
IEA
PLAZA Homology (enrichment)cellular nitrogen compound biosynthetic process HOM02SEM000696
GO:0009987
IEA
PLAZA Homology (enrichment)cellular process HOM02SEM000696
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT3G13490
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT3G13490
GO:1901576
IEA
PLAZA Homology (enrichment)organic substance biosynthetic process HOM02SEM000696
GO:0044267
IEA
PLAZA Homology (enrichment)cellular protein metabolic process HOM02SEM000696
GO:0034645
IEA
PLAZA Homology (enrichment)cellular macromolecule biosynthetic process HOM02SEM000696
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT3G13490
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT3G13490
GO:0034641
IEA
PLAZA Homology (enrichment)cellular nitrogen compound metabolic process HOM02SEM000696
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT3G13490
GO:0044260
IEA
PLAZA Homology (enrichment)cellular macromolecule metabolic process HOM02SEM000696
GO:0043170
IEA
PLAZA Homology (enrichment)macromolecule metabolic process HOM02SEM000696
GO:1901566
IEA
PLAZA Homology (enrichment)organonitrogen compound biosynthetic process HOM02SEM000696
GO:0009058
IEA
PLAZA Homology (enrichment)biosynthetic process HOM02SEM000696
GO:0009059
IEA
PLAZA Homology (enrichment)macromolecule biosynthetic process HOM02SEM000696
GO:1901564
IEA
PLAZA Homology (enrichment)organonitrogen compound metabolic process HOM02SEM000696
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT3G13490
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT3G13490
GO:0019538
IEA
PLAZA Homology (enrichment)protein metabolic process HOM02SEM000696
GO:0043603
IEA
PLAZA Homology (enrichment)cellular amide metabolic process HOM02SEM000696
GO:0043604
IEA
PLAZA Homology (enrichment)amide biosynthetic process HOM02SEM000696
GO:0010467
IEA
PLAZA Homology (enrichment)gene expression HOM02SEM000696
GO:0043043
IEA
PLAZA Homology (enrichment)peptide biosynthetic process HOM02SEM000696
GO:0006807
IEA
PLAZA Homology (enrichment)nitrogen compound metabolic process HOM02SEM000696
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT3G13490
GO:0006412
IEA
PLAZA Homology (enrichment)translation HOM02SEM000696
GO:0043436
IEA
PLAZA Homology (enrichment)oxoacid metabolic process HOM02SEM000696
GO:0006139
IEA
PLAZA Homology (enrichment)nucleobase-containing compound metabolic process HOM02SEM000696
GO:0043038
IEA
PLAZA Homology (enrichment)amino acid activation HOM02SEM000696
GO:0044249
IEA
PLAZA Homology (enrichment)cellular biosynthetic process HOM02SEM000696
GO:0043039
IEA
PLAZA Homology (enrichment)tRNA aminoacylation HOM02SEM000696
GO:0008152
IEA
PLAZA Homology (enrichment)metabolic process HOM02SEM000696
GO:0034660
IEA
PLAZA Homology (enrichment)ncRNA metabolic process HOM02SEM000696
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT3G13490
GO:0090304
IEA
PLAZA Homology (enrichment)nucleic acid metabolic process HOM02SEM000696
GO:0006518
IEA
PLAZA Homology (enrichment)peptide metabolic process HOM02SEM000696
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT3G13490
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT3G13490
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT3G13490
GO:0044237
IEA
PLAZA Homology (enrichment)cellular metabolic process HOM02SEM000696
GO:0044238
IEA
PLAZA Homology (enrichment)primary metabolic process HOM02SEM000696
GO:0006520
IEA
PLAZA Homology (enrichment)cellular amino acid metabolic process HOM02SEM000696
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT3G13490
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT3G13490
GO:0006082
IEA
PLAZA Homology (enrichment)organic acid metabolic process HOM02SEM000696
GO:0071704
IEA
PLAZA Homology (enrichment)organic substance metabolic process HOM02SEM000696
GO:0048827
IEA
PLAZA Integrative Orthologyphyllome development AT3G13490
GO:0006430
IEA
PLAZA Homology (enrichment)lysyl-tRNA aminoacylation HOM02SEM000696
GO:0006399
IEA
PLAZA Homology (enrichment)tRNA metabolic process HOM02SEM000696
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT3G13490
GO:0099402
IEA
PLAZA Integrative Orthologyplant organ development AT3G13490
GO:0016070
IEA
PLAZA Homology (enrichment)RNA metabolic process HOM02SEM000696
GO:0006418
IEA
PLAZA Homology (enrichment)tRNA aminoacylation for protein translation HOM02SEM000696
GO:0046483
IEA
PLAZA Homology (enrichment)heterocycle metabolic process HOM02SEM000696
GO:1901360
IEA
PLAZA Homology (enrichment)organic cyclic compound metabolic process HOM02SEM000696
GO:0019752
IEA
PLAZA Homology (enrichment)carboxylic acid metabolic process HOM02SEM000696
GO:0006725
IEA
PLAZA Homology (enrichment)cellular aromatic compound metabolic process HOM02SEM000696
GO:0035670
IEA
PLAZA Integrative Orthologyplant-type ovary development AT3G13490
GO:0048481
IEA
PLAZA Integrative Orthologyplant ovule development AT3G13490
GO:0048367
IEA
PLAZA Integrative Orthologyshoot system development AT3G13490
GO:0044281
IEA
PLAZA Homology (enrichment)small molecule metabolic process HOM02SEM000696
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT3G13490
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT3G13490

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030554
IEA
PLAZA Homology (enrichment)adenyl nucleotide binding HOM02SEM000696
GO:0017076
IEA
PLAZA Homology (enrichment)purine nucleotide binding HOM02SEM000696
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding SPCC18.08
GO:0005524
IEA
PLAZA Homology (enrichment)ATP binding HOM02SEM000696
GO:0043168
IEA
PLAZA Homology (enrichment)anion binding HOM02SEM000696
GO:0043167
IEA
PLAZA Homology (enrichment)ion binding HOM02SEM000696
GO:0035639
IEA
PLAZA Homology (enrichment)purine ribonucleoside triphosphate binding HOM02SEM000696
GO:1901265
IEA
PLAZA Homology (enrichment)nucleoside phosphate binding HOM02SEM000696
GO:0008144
IEA
PLAZA Homology (enrichment)drug binding HOM02SEM000696
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding SPCC18.08
GO:0000049
IEA
PLAZA Integrative OrthologytRNA binding SPCC18.08
GO:0016875
IEA
PLAZA Homology (enrichment)ligase activity, forming carbon-oxygen bonds HOM02SEM000696
GO:0016874
IEA
PLAZA Homology (enrichment)ligase activity HOM02SEM000696
GO:0140098
IEA
PLAZA Homology (enrichment)catalytic activity, acting on RNA HOM02SEM000696
GO:0003824
IEA
PLAZA Homology (enrichment)catalytic activity HOM02SEM000696
GO:0000166
IEA
PLAZA Homology (enrichment)nucleotide binding HOM02SEM000696
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding SPCC18.08
GO:0140101
IEA
PLAZA Homology (enrichment)catalytic activity, acting on a tRNA HOM02SEM000696
GO:0032555
IEA
PLAZA Homology (enrichment)purine ribonucleotide binding HOM02SEM000696
GO:0032553
IEA
PLAZA Homology (enrichment)ribonucleotide binding HOM02SEM000696
GO:0004824
IEA
PLAZA Homology (enrichment)lysine-tRNA ligase activity HOM02SEM000696
GO:0032559
IEA
PLAZA Homology (enrichment)adenyl ribonucleotide binding HOM02SEM000696
GO:0005488
IEA
PLAZA Integrative Orthologybinding SPCC18.08
GO:0097367
IEA
PLAZA Homology (enrichment)carbohydrate derivative binding HOM02SEM000696
GO:0003723
IEA
PLAZA Integrative OrthologyRNA binding SPCC18.08
GO:0004812
IEA
PLAZA Homology (enrichment)aminoacyl-tRNA ligase activity HOM02SEM000696
GO:0036094
IEA
PLAZA Homology (enrichment)small molecule binding HOM02SEM000696

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPCC18.08
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPCC18.08
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPCC18.08
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part SPCC18.08
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT3G13490
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion SPCC18.08
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPCC18.08
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPCC18.08
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPCC18.08
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPCC18.08
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT3G13490
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix SPCC18.08
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPCC18.08
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPCC18.08
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPCC18.08
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPCC18.08
GO:0005623
IEA
PLAZA Integrative Orthologycell SPCC18.08
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPCC18.08
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPCC18.08
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPCC18.08

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000738WHEP-TRS domain
IPR002313Lysine-tRNA ligase, class II
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR006195Aminoacyl-tRNA synthetase, class II
IPR009068S15/NS1, RNA-binding
IPR012340Nucleic acid-binding, OB-fold
IPR018149Lysyl-tRNA synthetase, class II, C-terminal

No MapMan annotations defined for this gene.
KeggID Description
K04567KARS, lysS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
No chloroplast target sequence found.