Gene: ccr194200 (Chondrus crispus)

Overview top

Gene Identifier
ccr194200
Transcript Identifier
ccr194200.1
Gene Type
Coding gene
Location
HG001459 : 88178-93974 : positive

Family Information

Homologous gene family
HOM02SEM000010
(859 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000020
(548 genes in 26 species)
specific family

Descriptions

Identifiers

Type Value
pidCDF32085
old_giCHC_T00001333001
UniprotR7Q3N2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
PLAZA Integrative Orthologytranscription preinitiation complex assembly YPL082C
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process YPL082C
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process YPL082C
GO:0009617
IEA
PLAZA Integrative Orthologyresponse to bacterium FBgn0022787
GO:0002786
IEA
PLAZA Integrative Orthologyregulation of antibacterial peptide production FBgn0022787
GO:0006357
IEA
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II YPL082C
GO:0009987
IEA
PLAZA Integrative Orthologycellular process YPL082C
GO:0048507
IEA
PLAZA Integrative Orthologymeristem development AT3G54280
GO:0006352
IEA
PLAZA Integrative OrthologyDNA-templated transcription, initiation YPL082C
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated YPL082C
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated YPL082C
GO:0048509
IEA
PLAZA Integrative Orthologyregulation of meristem development AT3G54280
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT3G54280
GO:0034248
IEA
PLAZA Integrative Orthologyregulation of cellular amide metabolic process FBgn0022787
GO:0002778
IEA
PLAZA Integrative Orthologyantibacterial peptide production FBgn0022787
GO:0002777
IEA
PLAZA Integrative Orthologyantimicrobial peptide biosynthetic process FBgn0022787
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus FBgn0022787
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process YPL082C
GO:0002775
IEA
PLAZA Integrative Orthologyantimicrobial peptide production FBgn0022787
GO:0009607
IEA
PLAZA Integrative Orthologyresponse to biotic stimulus FBgn0022787
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process YPL082C
GO:0002784
IEA
PLAZA Integrative Orthologyregulation of antimicrobial peptide production FBgn0022787
GO:0002780
IEA
PLAZA Integrative Orthologyantibacterial peptide biosynthetic process FBgn0022787
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process YPL082C
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process YPL082C
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT3G54280
GO:0043603
IEA
PLAZA Integrative Orthologycellular amide metabolic process FBgn0022787
GO:0034250
IEA
PLAZA Integrative Orthologypositive regulation of cellular amide metabolic process FBgn0022787
GO:0043604
IEA
PLAZA Integrative Orthologyamide biosynthetic process FBgn0022787
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process YPL082C
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YPL082C
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YPL082C
GO:0043043
IEA
PLAZA Integrative Orthologypeptide biosynthetic process FBgn0022787
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process YPL082C
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression YPL082C
GO:0098542
IEA
PLAZA Integrative Orthologydefense response to other organism FBgn0022787
GO:0009888
IEA
PLAZA Integrative Orthologytissue development AT3G54280
GO:0042742
IEA
PLAZA Integrative Orthologydefense response to bacterium FBgn0022787
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process YPL082C
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process YPL082C
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process YPL082C
GO:0002684
IEA
PLAZA Integrative Orthologypositive regulation of immune system process FBgn0022787
GO:0006367
IEA
PLAZA Integrative Orthologytranscription initiation from RNA polymerase II promoter YPL082C
GO:0098781
IEA
PLAZA Integrative OrthologyncRNA transcription YPL082C
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process YPL082C
GO:0002682
IEA
PLAZA Integrative Orthologyregulation of immune system process FBgn0022787
GO:0002440
IEA
PLAZA Integrative Orthologyproduction of molecular mediator of immune response FBgn0022787
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process YPL082C
GO:0006364
IEA
PLAZA Integrative OrthologyrRNA processing YPL082C
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II YPL082C
GO:0006360
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase I YPL082C
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly YPL082C
GO:1902182
IEA
PLAZA Integrative Orthologyshoot apical meristem development AT3G54280
GO:0019730
IEA
PLAZA Integrative Orthologyantimicrobial humoral response FBgn0022787
GO:0019731
IEA
PLAZA Integrative Orthologyantibacterial humoral response FBgn0022787
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus FBgn0022787
GO:1902183
IEA
PLAZA Integrative Orthologyregulation of shoot apical meristem development AT3G54280
GO:1902185
IEA
PLAZA Integrative Orthologypositive regulation of shoot apical meristem development AT3G54280
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process FBgn0022787
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process YPL082C
GO:0051707
IEA
PLAZA Integrative Orthologyresponse to other organism FBgn0022787
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process YPL082C
GO:0042790
IEA
PLAZA Integrative Orthologynucleolar large rRNA transcription by RNA polymerase I YPL082C
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process YPL082C
GO:1900426
IEA
PLAZA Integrative Orthologypositive regulation of defense response to bacterium FBgn0022787
GO:0061844
IEA
PLAZA Integrative Orthologyantimicrobial humoral immune response mediated by antimicrobial peptide FBgn0022787
GO:1900424
IEA
PLAZA Integrative Orthologyregulation of defense response to bacterium FBgn0022787
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process YPL082C
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process YPL082C
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization YPL082C
GO:0002759
IEA
PLAZA Integrative Orthologyregulation of antimicrobial humoral response FBgn0022787
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process FBgn0022787
GO:0051123
IEA
PLAZA Integrative OrthologyRNA polymerase II preinitiation complex assembly YPL082C
GO:0002760
IEA
PLAZA Integrative Orthologypositive regulation of antimicrobial humoral response FBgn0022787
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process AT3G54280
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process YPL082C
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress FBgn0022787
GO:0034470
IEA
PLAZA Integrative OrthologyncRNA processing YPL082C
GO:0008063
IEA
PLAZA Integrative OrthologyToll signaling pathway FBgn0022787
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT3G54280
GO:0045087
IEA
PLAZA Integrative Orthologyinnate immune response FBgn0022787
GO:0002702
IEA
PLAZA Integrative Orthologypositive regulation of production of molecular mediator of immune response FBgn0022787
GO:0002700
IEA
PLAZA Integrative Orthologyregulation of production of molecular mediator of immune response FBgn0022787
GO:0007166
IEA
PLAZA Integrative Orthologycell surface receptor signaling pathway FBgn0022787
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process YPL082C
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction FBgn0022787
GO:0050776
IEA
PLAZA Integrative Orthologyregulation of immune response FBgn0022787
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process YPL082C
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus FBgn0022787
GO:0050778
IEA
PLAZA Integrative Orthologypositive regulation of immune response FBgn0022787
GO:0032101
IEA
PLAZA Integrative Orthologyregulation of response to external stimulus FBgn0022787
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process YPL082C
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process YPL082C
GO:0032103
IEA
PLAZA Integrative Orthologypositive regulation of response to external stimulus FBgn0022787
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process YPL082C
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus FBgn0022787
GO:0048584
IEA
PLAZA Integrative Orthologypositive regulation of response to stimulus FBgn0022787
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription YPL082C
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription YPL082C
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process FBgn0022787
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process FBgn0022787
GO:0007154
IEA
PLAZA Integrative Orthologycell communication FBgn0022787
GO:0043207
IEA
PLAZA Integrative Orthologyresponse to external biotic stimulus FBgn0022787
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process YPL082C
GO:0010467
IEA
PLAZA Integrative Orthologygene expression YPL082C
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression YPL082C
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process YPL082C
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process YPL082C
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process YPL082C
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process YPL082C
GO:0006518
IEA
PLAZA Integrative Orthologypeptide metabolic process FBgn0022787
GO:0002833
IEA
PLAZA Integrative Orthologypositive regulation of response to biotic stimulus FBgn0022787
GO:0044087
IEA
PLAZA Integrative Orthologyregulation of cellular component biogenesis YPL082C
GO:0002831
IEA
PLAZA Integrative Orthologyregulation of response to biotic stimulus FBgn0022787
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis YPL082C
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process YPL082C
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process FBgn0022787
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process YPL082C
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process YPL082C
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process YPL082C
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process YPL082C
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process YPL082C
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process YPL082C
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process FBgn0022787
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization YPL082C
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process YPL082C
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process FBgn0022787
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process YPL082C
GO:0002225
IEA
PLAZA Integrative Orthologypositive regulation of antimicrobial peptide production FBgn0022787
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress FBgn0022787
GO:0006952
IEA
PLAZA Integrative Orthologydefense response FBgn0022787
GO:0022613
IEA
PLAZA Integrative Orthologyribonucleoprotein complex biogenesis YPL082C
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing YPL082C
GO:0043254
IEA
PLAZA Integrative Orthologyregulation of protein complex assembly YPL082C
GO:0009303
IEA
PLAZA Integrative OrthologyrRNA transcription YPL082C
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process YPL082C
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization YPL082C
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process YPL082C
GO:0016072
IEA
PLAZA Integrative OrthologyrRNA metabolic process YPL082C
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process YPL082C
GO:0002699
IEA
PLAZA Integrative Orthologypositive regulation of immune effector process FBgn0022787
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YPL082C
GO:0002697
IEA
PLAZA Integrative Orthologyregulation of immune effector process FBgn0022787
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process YPL082C
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process FBgn0022787
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process YPL082C
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process YPL082C
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process FBgn0022787
GO:2000142
IEA
PLAZA Integrative Orthologyregulation of DNA-templated transcription, initiation YPL082C
GO:0060260
IEA
PLAZA Integrative Orthologyregulation of transcription initiation from RNA polymerase II promoter YPL082C
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process YPL082C
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process YPL082C
GO:0031347
IEA
PLAZA Integrative Orthologyregulation of defense response FBgn0022787
GO:0002808
IEA
PLAZA Integrative Orthologyregulation of antibacterial peptide biosynthetic process FBgn0022787
GO:0002807
IEA
PLAZA Integrative Orthologypositive regulation of antimicrobial peptide biosynthetic process FBgn0022787
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription YPL082C
GO:0002805
IEA
PLAZA Integrative Orthologyregulation of antimicrobial peptide biosynthetic process FBgn0022787
GO:0002803
IEA
PLAZA Integrative Orthologypositive regulation of antibacterial peptide production FBgn0022787
GO:0023052
IEA
PLAZA Integrative Orthologysignaling FBgn0022787
GO:0002922
IEA
PLAZA Integrative Orthologypositive regulation of humoral immune response FBgn0022787
GO:0002920
IEA
PLAZA Integrative Orthologyregulation of humoral immune response FBgn0022787
GO:0031349
IEA
PLAZA Integrative Orthologypositive regulation of defense response FBgn0022787
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process YPL082C
GO:0002376
IEA
PLAZA Integrative Orthologyimmune system process FBgn0022787
GO:0045898
IEA
PLAZA Integrative Orthologyregulation of RNA polymerase II transcriptional preinitiation complex assembly YPL082C
GO:0002252
IEA
PLAZA Integrative Orthologyimmune effector process FBgn0022787
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly YPL082C
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly YPL082C
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT3G54280
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process YPL082C
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process YPL082C
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly YPL082C
GO:0006959
IEA
PLAZA Integrative Orthologyhumoral immune response FBgn0022787
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated YPL082C
GO:0006955
IEA
PLAZA Integrative Orthologyimmune response FBgn0022787
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process YPL082C
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process AT3G54280
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process YPL082C
GO:0006963
IEA
PLAZA Integrative Orthologypositive regulation of antibacterial peptide biosynthetic process FBgn0022787
GO:0051094
IEA
PLAZA Integrative Orthologypositive regulation of developmental process AT3G54280
GO:0042254
IEA
PLAZA Integrative Orthologyribosome biogenesis YPL082C
GO:0043902
IEA
PLAZA Integrative Orthologypositive regulation of multi-organism process FBgn0022787
GO:0043900
IEA
PLAZA Integrative Orthologyregulation of multi-organism process FBgn0022787

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0005488
IEA
InterProbinding
GO:0017111
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase activity YPL082C
GO:0016818
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides YPL082C
GO:0016817
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides YPL082C
GO:0017025
IEA
PLAZA Integrative OrthologyTBP-class protein binding YPL082C
GO:0016462
IEA
PLAZA Integrative Orthologypyrophosphatase activity YPL082C
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity YPL082C
GO:0008134
IEA
PLAZA Integrative Orthologytranscription factor binding YPL082C
GO:0003677
IEA
PLAZA Integrative OrthologyDNA binding YPL082C
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding YPL082C
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding YPL082C
GO:0016887
IEA
PLAZA Integrative OrthologyATPase activity YPL082C

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen YPL082C
GO:0005694
IEA
PLAZA Integrative Orthologychromosome YPL082C
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen YPL082C
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome YPL082C
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen YPL082C
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPBC1826.01c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YPL082C
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part YPL082C
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YPL082C
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm YPL082C
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPBC1826.01c
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPBC1826.01c
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPBC1826.01c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YPL082C
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YPL082C
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle YPL082C
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen YPL082C
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC1826.01c
GO:0005623
IEA
PLAZA Integrative Orthologycell SPBC1826.01c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC1826.01c
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle YPL082C
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC1826.01c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC1826.01c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR016024Armadillo-type fold
IPR001650Helicase, C-terminal
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR021133HEAT, type 2
IPR022707Domain of unknown function DUF3535
IPR000330SNF2-related, N-terminal domain
IPR011989Armadillo-like helical

No MapMan annotations defined for this gene.
KeggID Description
K15192BTAF1, MOT1; TATA-binding protein-associated factor [EC:3.6.4.-]
No chloroplast target sequence found.