Gene: YNL079C (Saccharomyces cerevisiae strain S288C)

Overview top

Gene Identifier
YNL079C
Transcript Identifier
YNL079C
Gene Type
Coding gene
Location
XIV : 478566-479165 : negative

Family Information

Homologous gene family
HOM02SEM072786
(orphan gene)
specific family

Descriptions

gene_descr
Major isoform of tropomyosin; binds to and stabilizes actin cables and filaments, which direct polarized cell growth and the distribution of several organelles; acetylated by the NatB complex and acetylated form binds actin most efficiently; TPM1 has a paralog, TPM2, that arose from the whole genome duplication

Identifiers

Type Value
pidYNL079C
UniprotP17536
RefSeq_mRNANM_001182917.1
EMBLAY692838
EMBLBK006947
EMBLDQ115393
EMBLM25501
EMBLX86470
EMBLZ71355
SGDS000005023

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006887
TAS
Genome Projectexocytosis
GO:0006887
TAS
Gene Ontologyexocytosis1
GO:0000001
TAS
Genome Projectmitochondrion inheritance
GO:0000001
TAS
Gene Ontologymitochondrion inheritance1
GO:0000011
TAS
Genome Projectvacuole inheritance
GO:0000011
TAS
Gene Ontologyvacuole inheritance1
GO:0007015
TAS
Genome Projectactin filament organization
GO:0007015
TAS
Gene Ontologyactin filament organization1
GO:0090527
IMP
Genome Projectactin filament reorganization
GO:0090527
IMP
Gene Ontologyactin filament reorganization2
GO:0008298
TAS
Genome Projectintracellular mRNA localization
GO:0008298
TAS
Gene Ontologyintracellular mRNA localization1
GO:0016192
TAS
Genome Projectvesicle-mediated transport
GO:0016192
TAS
Gene Ontologyvesicle-mediated transport1
GO:0030010
TAS
Genome Projectestablishment of cell polarity
GO:0030010
TAS
Gene Ontologyestablishment of cell polarity1
GO:0008154
TAS
Genome Projectactin polymerization or depolymerization
GO:0008154
TAS
Gene Ontologyactin polymerization or depolymerization1
GO:0030447
IMP
Genome Projectfilamentous growth
GO:0030447
IMP
Gene Ontologyfilamentous growth3
GO:0007118
TAS
Genome Projectbudding cell apical bud growth
GO:0007118
TAS
Gene Ontologybudding cell apical bud growth1
GO:0007124
IMP
Genome Projectpseudohyphal growth
GO:0007124
IMP
Gene Ontologypseudohyphal growth4
GO:0007119
TAS
Genome Projectbudding cell isotropic bud growth
GO:0007119
TAS
Gene Ontologybudding cell isotropic bud growth1
GO:0051017
IGI
Genome Projectactin filament bundle assembly
GO:0051017
IGI
Gene Ontologyactin filament bundle assembly5
GO:1903475
IGI
Gene Ontologymitotic actomyosin contractile ring assembly6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003786
TAS
Genome Projectactin lateral binding
GO:0003786
TAS
Gene Ontologyactin lateral binding7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000142
IDA
Genome Projectcellular bud neck contractile ring
GO:0000142
IDA
Gene Ontologycellular bud neck contractile ring5
GO:0032432
IDA
Genome Projectactin filament bundle
GO:0032432
IDA
Gene Ontologyactin filament bundle5
GO:0005856
IEA
Genome Projectcytoskeleton
GO:0005737
IEA
Genome Projectcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000533Tropomyosin

No MapMan annotations defined for this gene.
KeggID Description
K17945TPM1_2; tropomyosin, fungi type
No chloroplast target sequence found.