Gene: YNL040W (Saccharomyces cerevisiae strain S288C)

Overview top

Gene Identifier
YNL040W
Transcript Identifier
YNL040W
Gene Type
Coding gene
Location
XIV : 553380-554750 : positive

Family Information

Homologous gene family
HOM02SEM009369
(9 genes in 6 species)
specific family
Orthologous gene family
ORTHO02SEM009317
(8 genes in 6 species)
specific family

Descriptions

gene_descr
Putative protein of unknown function; has strong similarity to alanyl-tRNA synthases from Eubacteria; null mutant displays decreased translation rate and increased readthrough of premature stop codons; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YNL040W is not an essential gene

Identifiers

Type Value
pidYNL040W
UniprotP53960
RefSeq_mRNANM_001182879.1
EMBLBK006947
EMBLZ71316
SGDS000004985

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006450
IEA
Genome Projectregulation of translational fidelity
GO:0006412
IEA
Genome Projecttranslation
GO:0043039
IEA
Genome ProjecttRNA aminoacylation
GO:0006419
IEA
Genome Projectalanyl-tRNA aminoacylation
GO:0008150
ND
Genome Projectbiological_process
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002196
IDA
Genome ProjectSer-tRNA(Ala) hydrolase activity
GO:0002196
IDA
Gene OntologySer-tRNA(Ala) hydrolase activity1
GO:0002161
IDA
Genome Projectaminoacyl-tRNA editing activity
GO:0002161
IDA
Gene Ontologyaminoacyl-tRNA editing activity2
GO:0000049
IBA
Genome ProjecttRNA binding
GO:0005524
IEA
Genome ProjectATP binding
GO:0004813
IEA
Genome Projectalanine-tRNA ligase activity
GO:0000166
IEA
Genome Projectnucleotide binding
GO:0046872
IEA
Genome Projectmetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IDA
Genome Projectcytoplasm
GO:0005737
Gene Ontologycytoplasm3 4
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle ENSG00000108825
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle ENSG00000108825
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle ENSG00000108825
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle ENSG00000108825
GO:0005634
IEA
PLAZA Integrative Orthologynucleus ENSG00000108825

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR009000Translation protein, beta-barrel domain superfamily
IPR012947Threonyl/alanyl tRNA synthetase, SAD
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminal

No MapMan annotations defined for this gene.
KeggID Description
K01872AARS, alaS; alanyl-tRNA synthetase [EC:6.1.1.7]
K07050AARSD1, ALAX; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
No chloroplast target sequence found.