Gene: YLR007W (Saccharomyces cerevisiae strain S288C)

Overview top

Gene Identifier
YLR007W
Transcript Identifier
YLR007W
Gene Type
Coding gene
Location
XII : 164392-165402 : positive

Family Information

Homologous gene family
HOM02SEM020370
(4 genes in 4 species)
specific family

Descriptions

gene_descr
Component of the SMC5-SMC6 complex; this complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair

Identifiers

Type Value
pidYLR007W
UniprotQ07913
RefSeq_mRNANM_001181894.1
EMBLBK006945
EMBLZ73179
SGDS000003997

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000724
IBA
Genome Projectdouble-strand break repair via homologous recombination
GO:0006281
IDA, IMP
IEA
Genome ProjectDNA repair
GO:0006281
IDA, IMP
Gene OntologyDNA repair1 2
GO:0016925
IEA
Genome Projectprotein sumoylation
GO:0006301
IGI
Genome Projectpostreplication repair
GO:0006301
IGI
Gene Ontologypostreplication repair3
GO:0006974
IEA
Genome Projectcellular response to DNA damage stimulus
GO:0016567
IBA
Genome Projectprotein ubiquitination
GO:0006310
IEA
Genome ProjectDNA recombination
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process ENSG00000169189
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis SPCC550.05
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization SPCC550.05
GO:0007127
IEA
PLAZA Integrative Orthologymeiosis I SPCC550.05
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPCC550.05
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction SPCC550.05
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization SPCC550.05
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process SPCC550.05
GO:2001022
IEA
PLAZA Integrative Orthologypositive regulation of response to DNA damage stimulus ENSG00000169189
GO:0061982
IEA
PLAZA Integrative Orthologymeiosis I cell cycle process SPCC550.05
GO:2001020
IEA
PLAZA Integrative Orthologyregulation of response to DNA damage stimulus ENSG00000169189
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation ENSG00000169189
GO:0140013
IEA
PLAZA Integrative Orthologymeiotic nuclear division SPCC550.05
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division SPCC550.05
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000169189
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000169189
GO:0051321
IEA
PLAZA Integrative Orthologymeiotic cell cycle SPCC550.05
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission SPCC550.05
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000169189
GO:0048584
IEA
PLAZA Integrative Orthologypositive regulation of response to stimulus ENSG00000169189
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000169189
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress ENSG00000169189
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress ENSG00000169189
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPCC550.05
GO:1903046
IEA
PLAZA Integrative Orthologymeiotic cell cycle process SPCC550.05

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IBA
Genome Projectubiquitin-protein transferase activity
GO:0046872
IEA
Genome Projectmetal ion binding
GO:0019789
IDA
Genome ProjectSUMO transferase activity
GO:0019789
IDA
Gene OntologySUMO transferase activity2
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding SPCC550.05
GO:0046983
IEA
PLAZA Integrative Orthologyprotein dimerization activity ENSG00000169189
GO:0061659
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase activity SPCC550.05
GO:0061630
IEA
PLAZA Integrative Orthologyubiquitin protein ligase activity SPCC550.05

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030915
IDA
IEA
Genome ProjectSmc5-Smc6 complex
GO:0030915
IDA
Gene OntologySmc5-Smc6 complex2
GO:0005634
IDA
IEA
Genome Projectnucleus
GO:0005634
IDA
Gene Ontologynucleus1
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000169189
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000169189
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPCC550.05
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPCC550.05
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000169189
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000169189
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000169189
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPCC550.05
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000169189

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011513Non-structural maintenance of chromosomes element 1
IPR014857Zinc finger, RING-like

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.