Gene: YJR006W (Saccharomyces cerevisiae strain S288C)

Overview top

Gene Identifier
YJR006W
Transcript Identifier
YJR006W
Gene Type
Coding gene
Location
X : 449202-450665 : positive

Family Information

Homologous gene family
HOM02SEM002432
(29 genes in 25 species)
specific family
Orthologous gene family
ORTHO02SEM002574
(29 genes in 25 species)
specific family

Descriptions

gene_descr
Subunit of DNA polymerase delta (polymerase III); essential for cell viability; involved in DNA replication and DNA repair; forms a complex with Rev3p, Rev7p and Pol32p; relocalizes to the cytosol in response to hypoxia

Identifiers

Type Value
pidYJR006W
UniprotP46957
RefSeq_mRNANM_001181663.1
EMBLBK006943
EMBLD50324
EMBLX87611
EMBLZ49506
SGDS000003766

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006278
IDA
Genome ProjectRNA-dependent DNA biosynthetic process
GO:0006278
IDA
Gene OntologyRNA-dependent DNA biosynthetic process1
GO:0006260
IEA
Genome ProjectDNA replication
GO:0006298
TAS
Genome Projectmismatch repair
GO:0006298
TAS
Gene Ontologymismatch repair2
GO:0043137
IDA
Genome ProjectDNA replication, removal of RNA primer
GO:0043137
IDA
Gene OntologyDNA replication, removal of RNA primer3
GO:0090305
IEA
Genome Projectnucleic acid phosphodiester bond hydrolysis
GO:0006284
TAS
Genome Projectbase-excision repair
GO:0006284
TAS
Gene Ontologybase-excision repair4
GO:0006301
TAS
Genome Projectpostreplication repair
GO:0006301
TAS
Gene Ontologypostreplication repair4
GO:0006272
TAS
Genome Projectleading strand elongation
GO:0006272
TAS
Gene Ontologyleading strand elongation4
GO:0006273
TAS
Genome Projectlagging strand elongation
GO:0006273
TAS
Gene Ontologylagging strand elongation4
GO:0006289
TAS
Genome Projectnucleotide-excision repair
GO:0006289
TAS
Gene Ontologynucleotide-excision repair4
GO:0033260
IEA
PLAZA Integrative Orthologynuclear DNA replication SPAC27E2.05
GO:1902296
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in cell cycle DNA replication SPAC27E2.05
GO:0007051
IEA
PLAZA Integrative Orthologyspindle organization FBgn0027903
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process SPAC27E2.05
GO:0007010
IEA
PLAZA Integrative Orthologycytoskeleton organization FBgn0027903
GO:1902850
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton organization involved in mitosis FBgn0027903
GO:0007052
IEA
PLAZA Integrative Orthologymitotic spindle organization FBgn0027903
GO:1903046
IEA
PLAZA Integrative Orthologymeiotic cell cycle process SPAC27E2.05
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process SPAC27E2.05
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation SPAC27E2.05
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV SPAC27E2.05
GO:0000731
IEA
PLAZA Integrative OrthologyDNA synthesis involved in DNA repair SPAC27E2.05
GO:1902319
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in nuclear cell cycle DNA replication SPAC27E2.05
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus SPAC27E2.05
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle SPAC27E2.05
GO:0007017
IEA
PLAZA Integrative Orthologymicrotubule-based process FBgn0027903
GO:1902969
IEA
PLAZA Integrative Orthologymitotic DNA replication SPAC27E2.05
GO:0051321
IEA
PLAZA Integrative Orthologymeiotic cell cycle SPAC27E2.05
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus SPAC27E2.05
GO:0034644
IEA
PLAZA Integrative Orthologycellular response to UV SPAC27E2.05
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus SPAC27E2.05
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation SPAC27E2.05
GO:0070914
IEA
PLAZA Integrative OrthologyUV-damage excision repair SPAC27E2.05
GO:1903459
IEA
PLAZA Integrative Orthologymitotic DNA replication lagging strand elongation SPAC27E2.05
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process SPAC27E2.05
GO:1902983
IEA
PLAZA Integrative OrthologyDNA strand elongation involved in mitotic DNA replication SPAC27E2.05
GO:0044786
IEA
PLAZA Integrative Orthologycell cycle DNA replication SPAC27E2.05
GO:0000226
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton organization FBgn0027903
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization FBgn0027903
GO:0006279
IEA
PLAZA Integrative Orthologypremeiotic DNA replication SPAC27E2.05
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle SPAC27E2.05
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction SPAC27E2.05
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus SPAC27E2.05
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization FBgn0027903
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis FBgn0027903
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus SPAC27E2.05
GO:1904161
IEA
PLAZA Integrative OrthologyDNA synthesis involved in UV-damage excision repair SPAC27E2.05

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008310
TAS
Genome Projectsingle-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008310
TAS
Gene Ontologysingle-stranded DNA 3'-5' exodeoxyribonuclease activity4
GO:0003887
IDA
TAS, IEA
Genome ProjectDNA-directed DNA polymerase activity
GO:0003887
IDA
TAS
Gene OntologyDNA-directed DNA polymerase activity4 5
GO:0003677
IEA
Genome ProjectDNA binding
GO:0016779
IEA
Genome Projectnucleotidyltransferase activity
GO:0016740
IEA
Genome Projecttransferase activity
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding SPAC27E2.05

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043625
TAS
Genome Projectdelta DNA polymerase complex
GO:0043625
TAS
Gene Ontologydelta DNA polymerase complex4
GO:0005634
IDA
IEA
Genome Projectnucleus
GO:0005634
IDA
Gene Ontologynucleus6
GO:0005829
IDA
Genome Projectcytosol
GO:0005829
IDA
Gene Ontologycytosol6
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton FBgn0027903
GO:0005875
IEA
PLAZA Integrative Orthologymicrotubule associated complex FBgn0027903
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton FBgn0027903
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part FBgn0027903

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007185DNA polymerase alpha/epsilon, subunit B
IPR024826DNA polymerase delta/II small subunit family

No MapMan annotations defined for this gene.
KeggID Description
K02328POLD2; DNA polymerase delta subunit 2
No chloroplast target sequence found.