Gene: YGL122C (Saccharomyces cerevisiae strain S288C)

Overview top

Gene Identifier
YGL122C
Transcript Identifier
YGL122C
Gene Type
Coding gene
Location
VII : 278946-280523 : negative

Family Information

Homologous gene family
HOM02SEM011302
(8 genes in 6 species)
specific family

Descriptions

gene_descr
Nuclear polyadenylated RNA-binding protein; required for nuclear mRNA export and poly(A) tail length control; binds nuclear pore protein Mlp1p; involved in forming export-competent mRNPs in the nucleus; autoregulates mRNA levels; related to human hnRNPs; nuclear localization sequence binds Kap104p; protein abundance increases in response to DNA replication stress

Identifiers

Type Value
pidYGL122C
UniprotP32505
RefSeq_mRNANM_001180987.1
EMBLAY723810
EMBLBK006941
EMBLL08079
EMBLL10288
EMBLZ72644
SGDS000003090

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016973
IMP
Genome Projectpoly(A)+ mRNA export from nucleus
GO:0016973
IMP
Gene Ontologypoly(A)+ mRNA export from nucleus1
GO:1900152
IGI
Genome Projectnegative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:1900152
IGI
Gene Ontologynegative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay2
GO:0045945
IDA
Genome Projectpositive regulation of transcription by RNA polymerase III
GO:0045945
IDA
Gene Ontologypositive regulation of transcription by RNA polymerase III3
GO:0043488
IPI, IMP
Genome Projectregulation of mRNA stability
GO:0043488
IPI, IMP
Gene Ontologyregulation of mRNA stability4
GO:1900364
IBA
Genome Projectnegative regulation of mRNA polyadenylation
GO:0006378
IDA
Genome ProjectmRNA polyadenylation
GO:0006378
IDA
Gene OntologymRNA polyadenylation5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Genome ProjectmRNA binding
GO:0003729
Gene OntologymRNA binding6
GO:0003723
IEA
Genome ProjectRNA binding
GO:0000049
IDA
Genome ProjecttRNA binding
GO:0000049
IDA
Gene OntologytRNA binding3
GO:0008143
IDA
Genome Projectpoly(A) binding
GO:0008143
IDA
Gene Ontologypoly(A) binding7
GO:0008097
IDA
Genome Project5S rRNA binding
GO:0008097
IDA
Gene Ontology5S rRNA binding3
GO:0046872
IEA
Genome Projectmetal ion binding
GO:0033204
IDA
Genome Projectribonuclease P RNA binding
GO:0033204
IDA
Gene Ontologyribonuclease P RNA binding3
GO:0008312
IDA
Genome Project7S RNA binding
GO:0008312
IDA
Gene Ontology7S RNA binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
IEA
Genome Projectnucleus
GO:0005634
IDA
Gene Ontologynucleus1 8 9
GO:0005737
IDA
Genome Projectcytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR021083Nuclear abundant poly(A) RNA-binding protein Nab2, N-terminal

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.