Gene: WBGene00018586 (Caenorhabditis elegans)

Overview top

Gene Identifier
WBGene00018586
Transcript Identifier
F48A11.5a
Gene Type
Coding gene
Location
II : 217318-220621 : negative

Family Information

Homologous gene family
HOM02SEM016541
(5 genes in 3 species)
specific family
Orthologous gene family
ORTHO02SEM013334
(4 genes in 3 species)
specific family

Descriptions

gene_descr
Caenorhabditis elegans Protein UBXN-3, isoform a (ubxn-3) mRNA, complete cds.

Identifiers

Type Value
pidF48A11.5a
UniprotH2L056
RefSeq_mRNANM_001027009.2
EMBLFO081417

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009792
IEA
Genome Projectembryo development ending in birth or egg hatching
GO:1905634
IGI
Gene Ontologyregulation of protein localization to chromatin1
GO:1903364
IGI
Gene Ontologypositive regulation of cellular protein catabolic process2
GO:0045977
IGI
Gene Ontologypositive regulation of mitotic cell cycle, embryonic1
GO:0042006
IGI
Gene Ontologymasculinization of hermaphroditic germ-line2
GO:0007283
IGI
Gene Ontologyspermatogenesis2
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process FBgn0034068
GO:0006508
IEA
PLAZA Integrative Orthologyproteolysis FBgn0034068
GO:0002701
IEA
PLAZA Integrative Orthologynegative regulation of production of molecular mediator of immune response FBgn0034068
GO:0002700
IEA
PLAZA Integrative Orthologyregulation of production of molecular mediator of immune response FBgn0034068
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process ENSG00000185104
GO:0009617
IEA
PLAZA Integrative Orthologyresponse to bacterium FBgn0034068
GO:0002787
IEA
PLAZA Integrative Orthologynegative regulation of antibacterial peptide production FBgn0034068
GO:0002786
IEA
PLAZA Integrative Orthologyregulation of antibacterial peptide production FBgn0034068
GO:0002785
IEA
PLAZA Integrative Orthologynegative regulation of antimicrobial peptide production FBgn0034068
GO:0051235
IEA
PLAZA Integrative Orthologymaintenance of location ENSG00000185104
GO:0007166
IEA
PLAZA Integrative Orthologycell surface receptor signaling pathway FBgn0034068
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated ENSG00000185104
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process ENSG00000185104
GO:0030162
IEA
PLAZA Integrative Orthologyregulation of proteolysis FBgn0034068
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction FBgn0034068
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated ENSG00000185104
GO:0050829
IEA
PLAZA Integrative Orthologydefense response to Gram-negative bacterium FBgn0034068
GO:0050776
IEA
PLAZA Integrative Orthologyregulation of immune response FBgn0034068
GO:0034249
IEA
PLAZA Integrative Orthologynegative regulation of cellular amide metabolic process FBgn0034068
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process ENSG00000185104
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus FBgn0034068
GO:0050777
IEA
PLAZA Integrative Orthologynegative regulation of immune response FBgn0034068
GO:0032101
IEA
PLAZA Integrative Orthologyregulation of response to external stimulus FBgn0034068
GO:0010557
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule biosynthetic process ENSG00000185104
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process ENSG00000185104
GO:0034248
IEA
PLAZA Integrative Orthologyregulation of cellular amide metabolic process FBgn0034068
GO:0032102
IEA
PLAZA Integrative Orthologynegative regulation of response to external stimulus FBgn0034068
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process ENSG00000185104
GO:0048585
IEA
PLAZA Integrative Orthologynegative regulation of response to stimulus FBgn0034068
GO:0002814
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria FBgn0034068
GO:0002813
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria FBgn0034068
GO:0002812
IEA
PLAZA Integrative Orthologybiosynthetic process of antibacterial peptides active against Gram-negative bacteria FBgn0034068
GO:0002778
IEA
PLAZA Integrative Orthologyantibacterial peptide production FBgn0034068
GO:0051220
IEA
PLAZA Integrative Orthologycytoplasmic sequestering of protein ENSG00000185104
GO:0009968
IEA
PLAZA Integrative Orthologynegative regulation of signal transduction FBgn0034068
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus FBgn0034068
GO:0002777
IEA
PLAZA Integrative Orthologyantimicrobial peptide biosynthetic process FBgn0034068
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus FBgn0034068
GO:0009607
IEA
PLAZA Integrative Orthologyresponse to biotic stimulus FBgn0034068
GO:0002775
IEA
PLAZA Integrative Orthologyantimicrobial peptide production FBgn0034068
GO:0002784
IEA
PLAZA Integrative Orthologyregulation of antimicrobial peptide production FBgn0034068
GO:0042994
IEA
PLAZA Integrative Orthologycytoplasmic sequestering of transcription factor ENSG00000185104
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription ENSG00000185104
GO:1901566
IEA
PLAZA Integrative Orthologyorganonitrogen compound biosynthetic process FBgn0034068
GO:0002780
IEA
PLAZA Integrative Orthologyantibacterial peptide biosynthetic process FBgn0034068
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process ENSG00000185104
GO:0045861
IEA
PLAZA Integrative Orthologynegative regulation of proteolysis FBgn0034068
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process ENSG00000185104
GO:0045740
IEA
PLAZA Integrative Orthologypositive regulation of DNA replication ENSG00000185104
GO:0007154
IEA
PLAZA Integrative Orthologycell communication FBgn0034068
GO:0043603
IEA
PLAZA Integrative Orthologycellular amide metabolic process FBgn0034068
GO:0043207
IEA
PLAZA Integrative Orthologyresponse to external biotic stimulus FBgn0034068
GO:0043604
IEA
PLAZA Integrative Orthologyamide biosynthetic process FBgn0034068
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process ENSG00000185104
GO:0044092
IEA
PLAZA Integrative Orthologynegative regulation of molecular function ENSG00000185104
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000185104
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process ENSG00000185104
GO:0010467
IEA
PLAZA Integrative Orthologygene expression ENSG00000185104
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000185104
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression ENSG00000185104
GO:0043043
IEA
PLAZA Integrative Orthologypeptide biosynthetic process FBgn0034068
GO:0051054
IEA
PLAZA Integrative Orthologypositive regulation of DNA metabolic process ENSG00000185104
GO:0045185
IEA
PLAZA Integrative Orthologymaintenance of protein location ENSG00000185104
GO:0098542
IEA
PLAZA Integrative Orthologydefense response to other organism FBgn0034068
GO:0042742
IEA
PLAZA Integrative Orthologydefense response to bacterium FBgn0034068
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process ENSG00000185104
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process ENSG00000185104
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process ENSG00000185104
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process ENSG00000185104
GO:0043433
IEA
PLAZA Integrative Orthologynegative regulation of DNA-binding transcription factor activity ENSG00000185104
GO:0032088
IEA
PLAZA Integrative Orthologynegative regulation of NF-kappaB transcription factor activity ENSG00000185104
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process ENSG00000185104
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process ENSG00000185104
GO:0006518
IEA
PLAZA Integrative Orthologypeptide metabolic process FBgn0034068
GO:0044089
IEA
PLAZA Integrative Orthologypositive regulation of cellular component biogenesis ENSG00000185104
GO:0044087
IEA
PLAZA Integrative Orthologyregulation of cellular component biogenesis ENSG00000185104
GO:0002832
IEA
PLAZA Integrative Orthologynegative regulation of response to biotic stimulus FBgn0034068
GO:0002831
IEA
PLAZA Integrative Orthologyregulation of response to biotic stimulus FBgn0034068
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000185104
GO:0002683
IEA
PLAZA Integrative Orthologynegative regulation of immune system process FBgn0034068
GO:0002682
IEA
PLAZA Integrative Orthologyregulation of immune system process FBgn0034068
GO:0002440
IEA
PLAZA Integrative Orthologyproduction of molecular mediator of immune response FBgn0034068
GO:0051052
IEA
PLAZA Integrative Orthologyregulation of DNA metabolic process ENSG00000185104
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process FBgn0034068
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000185104
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process FBgn0034068
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process ENSG00000185104
GO:0019730
IEA
PLAZA Integrative Orthologyantimicrobial humoral response FBgn0034068
GO:0010646
IEA
PLAZA Integrative Orthologyregulation of cell communication FBgn0034068
GO:0019731
IEA
PLAZA Integrative Orthologyantibacterial humoral response FBgn0034068
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process ENSG00000185104
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus FBgn0034068
GO:0010648
IEA
PLAZA Integrative Orthologynegative regulation of cell communication FBgn0034068
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process ENSG00000185104
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process FBgn0034068
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress FBgn0034068
GO:0006952
IEA
PLAZA Integrative Orthologydefense response FBgn0034068
GO:0006275
IEA
PLAZA Integrative Orthologyregulation of DNA replication ENSG00000185104
GO:0043254
IEA
PLAZA Integrative Orthologyregulation of protein complex assembly ENSG00000185104
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000185104
GO:0032269
IEA
PLAZA Integrative Orthologynegative regulation of cellular protein metabolic process FBgn0034068
GO:0031334
IEA
PLAZA Integrative Orthologypositive regulation of protein complex assembly ENSG00000185104
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process ENSG00000185104
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process ENSG00000185104
GO:0002698
IEA
PLAZA Integrative Orthologynegative regulation of immune effector process FBgn0034068
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process ENSG00000185104
GO:0002697
IEA
PLAZA Integrative Orthologyregulation of immune effector process FBgn0034068
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process FBgn0034068
GO:0051707
IEA
PLAZA Integrative Orthologyresponse to other organism FBgn0034068
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process ENSG00000185104
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication ENSG00000185104
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process FBgn0034068
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process ENSG00000185104
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process ENSG00000185104
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process ENSG00000185104
GO:0031348
IEA
PLAZA Integrative Orthologynegative regulation of defense response FBgn0034068
GO:0002809
IEA
PLAZA Integrative Orthologynegative regulation of antibacterial peptide biosynthetic process FBgn0034068
GO:0031347
IEA
PLAZA Integrative Orthologyregulation of defense response FBgn0034068
GO:0002808
IEA
PLAZA Integrative Orthologyregulation of antibacterial peptide biosynthetic process FBgn0034068
GO:0010942
IEA
PLAZA Integrative Orthologypositive regulation of cell death ENSG00000185104
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription ENSG00000185104
GO:0002806
IEA
PLAZA Integrative Orthologynegative regulation of antimicrobial peptide biosynthetic process FBgn0034068
GO:0002805
IEA
PLAZA Integrative Orthologyregulation of antimicrobial peptide biosynthetic process FBgn0034068
GO:0010941
IEA
PLAZA Integrative Orthologyregulation of cell death ENSG00000185104
GO:0023052
IEA
PLAZA Integrative Orthologysignaling FBgn0034068
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process ENSG00000185104
GO:0051130
IEA
PLAZA Integrative Orthologypositive regulation of cellular component organization ENSG00000185104
GO:0023051
IEA
PLAZA Integrative Orthologyregulation of signaling FBgn0034068
GO:0002921
IEA
PLAZA Integrative Orthologynegative regulation of humoral immune response FBgn0034068
GO:0002920
IEA
PLAZA Integrative Orthologyregulation of humoral immune response FBgn0034068
GO:0023057
IEA
PLAZA Integrative Orthologynegative regulation of signaling FBgn0034068
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process ENSG00000185104
GO:0061844
IEA
PLAZA Integrative Orthologyantimicrobial humoral immune response mediated by antimicrobial peptide FBgn0034068
GO:0002376
IEA
PLAZA Integrative Orthologyimmune system process FBgn0034068
GO:0065009
IEA
PLAZA Integrative Orthologyregulation of molecular function ENSG00000185104
GO:0009966
IEA
PLAZA Integrative Orthologyregulation of signal transduction FBgn0034068
GO:1900424
IEA
PLAZA Integrative Orthologyregulation of defense response to bacterium FBgn0034068
GO:1900425
IEA
PLAZA Integrative Orthologynegative regulation of defense response to bacterium FBgn0034068
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process FBgn0034068
GO:0002252
IEA
PLAZA Integrative Orthologyimmune effector process FBgn0034068
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000185104
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process ENSG00000185104
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000185104
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization ENSG00000185104
GO:0051248
IEA
PLAZA Integrative Orthologynegative regulation of protein metabolic process FBgn0034068
GO:0061060
IEA
PLAZA Integrative Orthologynegative regulation of peptidoglycan recognition protein signaling pathway FBgn0034068
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process ENSG00000185104
GO:0006959
IEA
PLAZA Integrative Orthologyhumoral immune response FBgn0034068
GO:0002759
IEA
PLAZA Integrative Orthologyregulation of antimicrobial humoral response FBgn0034068
GO:0006955
IEA
PLAZA Integrative Orthologyimmune response FBgn0034068
GO:0008219
IEA
PLAZA Integrative Orthologycell death ENSG00000185104
GO:0051090
IEA
PLAZA Integrative Orthologyregulation of DNA-binding transcription factor activity ENSG00000185104
GO:0008348
IEA
PLAZA Integrative Orthologynegative regulation of antimicrobial humoral response FBgn0034068
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process ENSG00000185104
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress FBgn0034068
GO:0007253
IEA
PLAZA Integrative Orthologycytoplasmic sequestering of NF-kappaB ENSG00000185104
GO:0061058
IEA
PLAZA Integrative Orthologyregulation of peptidoglycan recognition protein signaling pathway FBgn0034068
GO:0061057
IEA
PLAZA Integrative Orthologypeptidoglycan recognition protein signaling pathway FBgn0034068
GO:0043900
IEA
PLAZA Integrative Orthologyregulation of multi-organism process FBgn0034068
GO:0043901
IEA
PLAZA Integrative Orthologynegative regulation of multi-organism process FBgn0034068

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044877
IDA
Gene Ontologyprotein-containing complex binding2
GO:0036435
IDA
Gene OntologyK48-linked polyubiquitin modification-dependent protein binding2
GO:0005515
IPI
Gene Ontologyprotein binding1 2
GO:0019899
IEA
PLAZA Integrative Orthologyenzyme binding ENSG00000185104
GO:0044389
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase binding ENSG00000185104
GO:0008134
IEA
PLAZA Integrative Orthologytranscription factor binding ENSG00000185104
GO:0032182
IEA
PLAZA Integrative Orthologyubiquitin-like protein binding ENSG00000185104
GO:0051059
IEA
PLAZA Integrative OrthologyNF-kappaB binding ENSG00000185104
GO:0019900
IEA
PLAZA Integrative Orthologykinase binding ENSG00000185104
GO:0043130
IEA
PLAZA Integrative Orthologyubiquitin binding ENSG00000185104
GO:0031625
IEA
PLAZA Integrative Orthologyubiquitin protein ligase binding ENSG00000185104
GO:0031072
IEA
PLAZA Integrative Orthologyheat shock protein binding ENSG00000185104
GO:0019901
IEA
PLAZA Integrative Orthologyprotein kinase binding ENSG00000185104

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048471
IDA
Genome Projectperinuclear region of cytoplasm
GO:0048471
IDA
Gene Ontologyperinuclear region of cytoplasm2
GO:0005737
IDA
Gene Ontologycytoplasm1
GO:0005634
IDA
Gene Ontologynucleus1
GO:0000785
IDA
Gene Ontologychromatin1
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system ENSG00000185104
GO:0016020
IEA
PLAZA Integrative Orthologymembrane ENSG00000185104
GO:0044425
IEA
PLAZA Integrative Orthologymembrane part ENSG00000185104
GO:0005783
IEA
PLAZA Integrative Orthologyendoplasmic reticulum ENSG00000185104
GO:0034098
IEA
PLAZA Integrative OrthologyVCP-NPL4-UFD1 AAA ATPase complex ENSG00000185104
GO:0098827
IEA
PLAZA Integrative Orthologyendoplasmic reticulum subcompartment ENSG00000185104
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex ENSG00000185104
GO:0005829
IEA
PLAZA Integrative Orthologycytosol ENSG00000185104
GO:0005789
IEA
PLAZA Integrative Orthologyendoplasmic reticulum membrane ENSG00000185104
GO:0042175
IEA
PLAZA Integrative Orthologynuclear outer membrane-endoplasmic reticulum membrane network ENSG00000185104
GO:0098796
IEA
PLAZA Integrative Orthologymembrane protein complex ENSG00000185104
GO:0031984
IEA
PLAZA Integrative Orthologyorganelle subcompartment ENSG00000185104
GO:0044432
IEA
PLAZA Integrative Orthologyendoplasmic reticulum part ENSG00000185104

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001012UBX domain
IPR006577UAS
IPR029071Ubiquitin-like domain superfamily

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.