Gene: Sro6_g005120 (Seminavis robusta)

Overview top

Gene Identifier
Sro6_g005120
Transcript Identifier
Sro6_g005120.1
Gene Type
Coding gene
Location
Sro_contig6 : 102952-104311 : positive

Family Information

Homologous gene family
HOM02SEM004720
(17 genes in 15 species)
specific family

Descriptions

eggnog_description
Protein THYLAKOID FORMATION1
annomine_description
Protein THYLAKOID FORMATION1, chloroplastic

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0072657
IEA
PLAZA Integrative Orthologyprotein localization to membrane AT2G20890
GO:0015996
IEA
PLAZA Integrative Orthologychlorophyll catabolic process AT2G20890
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process AT2G20890
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process AT2G20890
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT2G20890
GO:0042886
IEA
PLAZA Integrative Orthologyamide transport AT2G20890
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT2G20890
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process AT2G20890
GO:0009743
IEA
PLAZA Integrative Orthologyresponse to carbohydrate AT2G20890
GO:2000070
IEA
PLAZA Integrative Orthologyregulation of response to water deprivation AT2G20890
GO:0061024
IEA
PLAZA Integrative Orthologymembrane organization AT2G20890
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT2G20890
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process AT2G20890
GO:0033036
IEA
PLAZA Integrative Orthologymacromolecule localization AT2G20890
GO:0051186
IEA
PLAZA Integrative Orthologycofactor metabolic process AT2G20890
GO:1990069
IEA
PLAZA Integrative Orthologystomatal opening AT2G20890
GO:0051187
IEA
PLAZA Integrative Orthologycofactor catabolic process AT2G20890
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus AT2G20890
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process AT2G20890
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process AT2G20890
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process AT2G20890
GO:0071322
IEA
EggNOGmappercellular response to carbohydrate stimulus
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT2G20890
GO:0045184
IEA
PLAZA Integrative Orthologyestablishment of protein localization AT2G20890
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process AT2G20890
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process AT2G20890
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process AT2G20890
GO:0046149
IEA
PLAZA Integrative Orthologypigment catabolic process AT2G20890
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT2G20890
GO:0007186
IEA
EggNOGmapperG protein-coupled receptor signaling pathway
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT2G20890
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus AT2G20890
GO:0009756
IEA
PLAZA Integrative Orthologycarbohydrate mediated signaling AT2G20890
GO:0006886
IEA
PLAZA Integrative Orthologyintracellular protein transport AT2G20890
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT2G20890
GO:1901701
IEA
PLAZA Integrative Orthologycellular response to oxygen-containing compound AT2G20890
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process AT2G20890
GO:0010182
IEA
EggNOGmappersugar mediated signaling pathway
GO:0015994
IEA
PLAZA Integrative Orthologychlorophyll metabolic process AT2G20890
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process AT2G20890
GO:0071702
IEA
PLAZA Integrative Orthologyorganic substance transport AT2G20890
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT2G20890
GO:0072596
IEA
PLAZA Integrative Orthologyestablishment of protein localization to chloroplast AT2G20890
GO:0017038
IEA
PLAZA Integrative Orthologyprotein import AT2G20890
GO:0072598
IEA
PLAZA Integrative Orthologyprotein localization to chloroplast AT2G20890
GO:0072594
IEA
PLAZA Integrative Orthologyestablishment of protein localization to organelle AT2G20890
GO:0072593
IEA
PLAZA Integrative Orthologyreactive oxygen species metabolic process AT2G20890
GO:0009668
IEA
PLAZA Integrative Orthologyplastid membrane organization AT2G20890
GO:0044743
IEA
PLAZA Integrative Orthologyprotein transmembrane import into intracellular organelle AT2G20890
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT2G20890
GO:0045037
IEA
EggNOGmapperprotein import into chloroplast stroma
GO:0042440
IEA
PLAZA Integrative Orthologypigment metabolic process AT2G20890
GO:0045036
IEA
PLAZA Integrative Orthologyprotein targeting to chloroplast AT2G20890
GO:0045038
IEA
EggNOGmapperprotein import into chloroplast thylakoid membrane
GO:0071705
IEA
PLAZA Integrative Orthologynitrogen compound transport AT2G20890
GO:0055085
IEA
PLAZA Integrative Orthologytransmembrane transport AT2G20890
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process AT2G20890
GO:0010118
IEA
PLAZA Integrative Orthologystomatal movement AT2G20890
GO:2000377
IEA
PLAZA Integrative Orthologyregulation of reactive oxygen species metabolic process AT2G20890
GO:0071310
IEA
PLAZA Integrative Orthologycellular response to organic substance AT2G20890
GO:0010119
IEA
PLAZA Integrative Orthologyregulation of stomatal movement AT2G20890
GO:0006778
IEA
PLAZA Integrative Orthologyporphyrin-containing compound metabolic process AT2G20890
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process AT2G20890
GO:0009414
IEA
PLAZA Integrative Orthologyresponse to water deprivation AT2G20890
GO:0009657
IEA
PLAZA Integrative Orthologyplastid organization AT2G20890
GO:0090150
IEA
PLAZA Integrative Orthologyestablishment of protein localization to membrane AT2G20890
GO:0009415
IEA
PLAZA Integrative Orthologyresponse to water AT2G20890
GO:0006787
IEA
PLAZA Integrative Orthologyporphyrin-containing compound catabolic process AT2G20890
GO:1902456
IEA
PLAZA Integrative Orthologyregulation of stomatal opening AT2G20890
GO:1902458
IEA
PLAZA Integrative Orthologypositive regulation of stomatal opening AT2G20890
GO:1903426
IEA
PLAZA Integrative Orthologyregulation of reactive oxygen species biosynthetic process AT2G20890
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process AT2G20890
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process AT2G20890
GO:0034613
IEA
PLAZA Integrative Orthologycellular protein localization AT2G20890
GO:0033365
IEA
PLAZA Integrative Orthologyprotein localization to organelle AT2G20890
GO:0015833
IEA
PLAZA Integrative Orthologypeptide transport AT2G20890
GO:0010027
IEA
EggNOGmapperthylakoid membrane organization
GO:1903409
IEA
PLAZA Integrative Orthologyreactive oxygen species biosynthetic process AT2G20890
GO:0006605
IEA
PLAZA Integrative Orthologyprotein targeting AT2G20890
GO:0006612
IEA
PLAZA Integrative Orthologyprotein targeting to membrane AT2G20890
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process AT2G20890
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance AT2G20890
GO:0065002
IEA
PLAZA Integrative Orthologyintracellular protein transmembrane transport AT2G20890
GO:0071806
IEA
PLAZA Integrative Orthologyprotein transmembrane transport AT2G20890
GO:0033015
IEA
PLAZA Integrative Orthologytetrapyrrole catabolic process AT2G20890
GO:0033013
IEA
PLAZA Integrative Orthologytetrapyrrole metabolic process AT2G20890
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process AT2G20890
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process AT2G20890
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress AT2G20890
GO:0008104
IEA
PLAZA Integrative Orthologyprotein localization AT2G20890
GO:0015031
IEA
PLAZA Integrative Orthologyprotein transport AT2G20890
GO:0070727
IEA
PLAZA Integrative Orthologycellular macromolecule localization AT2G20890
GO:0015979
IEA
InterProphotosynthesis
GO:0010207
IEA
EggNOGmapperphotosystem II assembly
GO:0010207
IEA
InterProphotosystem II assembly
GO:0007166
IEA
EggNOGmappercell surface receptor signaling pathway
GO:0016482
IEA
EggNOGmappercytosolic transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT2G20890
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT2G20890

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
IEA
EggNOGmapperchloroplast stroma
GO:0034357
IEA
PLAZA Integrative Orthologyphotosynthetic membrane AT2G20890
GO:0055035
IEA
PLAZA Integrative Orthologyplastid thylakoid membrane AT2G20890
GO:0010319
IEA
EggNOGmapperstromule
GO:0009579
IEA
PLAZA Integrative Orthologythylakoid AT2G20890
GO:0019866
IEA
PLAZA Integrative Orthologyorganelle inner membrane AT2G20890
GO:0009528
IEA
EggNOGmapperplastid inner membrane
GO:0031976
IEA
PLAZA Integrative Orthologyplastid thylakoid AT2G20890
GO:0009535
IEA
EggNOGmapperchloroplast thylakoid membrane
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT2G20890
GO:0009534
IEA
PLAZA Integrative Orthologychloroplast thylakoid AT2G20890
GO:0031984
IEA
PLAZA Integrative Orthologyorganelle subcompartment AT2G20890
GO:0044436
IEA
PLAZA Integrative Orthologythylakoid part AT2G20890
GO:0042651
IEA
PLAZA Integrative Orthologythylakoid membrane AT2G20890
GO:0009707
IEA
EggNOGmapperchloroplast outer membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR017499Protein Thf1

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
Cleavage position Sequence
20 VSTHAFTAPSVPAFTQSSALMMSTE