Gene: Sro2137_g316050 (Seminavis robusta)

Overview top

Gene Identifier
Sro2137_g316050
Transcript Identifier
Sro2137_g316050.1
Gene Type
Coding gene
Location
Sro_contig2137 : 14470-15441 : positive

Family Information

Homologous gene family
HOM02SEM000389
(90 genes in 26 species)
specific family

Descriptions

eggnog_description
high mobility group
annomine_description
group protein B1

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070898
IEA
PLAZA Integrative OrthologyRNA polymerase III preinitiation complex assembly YPR052C
GO:0071103
IEA
PLAZA Integrative OrthologyDNA conformation change YMR072W
GO:0070897
IEA
PLAZA Integrative Orthologytranscription preinitiation complex assembly YPR052C
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process YKL032C
GO:0006357
IEA
EggNOGmapperregulation of transcription by RNA polymerase II
GO:0000002
IEA
PLAZA Integrative Orthologymitochondrial genome maintenance YMR072W
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization YPR052C
GO:0006352
IEA
PLAZA Integrative OrthologyDNA-templated transcription, initiation YPR052C
GO:0006354
IEA
PLAZA Integrative OrthologyDNA-templated transcription, elongation YPR052C
GO:0036385
IEA
PLAZA Integrative Orthologynucleoid DNA packaging YMR072W
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus YPR052C
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process YKL032C
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress YPR052C
GO:0006338
IEA
PLAZA Integrative Orthologychromatin remodeling YPR052C
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus YKL032C
GO:0000122
IEA
PLAZA Integrative Orthologynegative regulation of transcription by RNA polymerase II YKL032C
GO:0000001
IEA
PLAZA Integrative Orthologymitochondrion inheritance YMR072W
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription YKL032C
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis YPR052C
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization YPR052C
GO:0051179
IEA
PLAZA Integrative Orthologylocalization YMR072W
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression YKL032C
GO:0006259
IEA
PLAZA Integrative OrthologyDNA metabolic process YPR052C
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical YKL032C
GO:2001020
IEA
PLAZA Integrative Orthologyregulation of response to DNA damage stimulus YKL032C
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus YKL032C
GO:0071456
IEA
PLAZA Integrative Orthologycellular response to hypoxia YKL032C
GO:0001192
IEA
PLAZA Integrative Orthologymaintenance of transcriptional fidelity during DNA-templated transcription elongation YPR052C
GO:0001195
IEA
PLAZA Integrative Orthologymaintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter YPR052C
GO:0071453
IEA
PLAZA Integrative Orthologycellular response to oxygen levels YKL032C
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus YKL032C
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis YPR052C
GO:0070482
IEA
PLAZA Integrative Orthologyresponse to oxygen levels YKL032C
GO:0006367
IEA
PLAZA Integrative Orthologytranscription initiation from RNA polymerase II promoter YPR052C
GO:0036293
IEA
PLAZA Integrative Orthologyresponse to decreased oxygen levels YKL032C
GO:0051052
IEA
PLAZA Integrative Orthologyregulation of DNA metabolic process YKL032C
GO:0006366
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase II YPR052C
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process YKL032C
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly YPR052C
GO:0036294
IEA
PLAZA Integrative Orthologycellular response to decreased oxygen levels YKL032C
GO:0090139
IEA
PLAZA Integrative Orthologymitochondrial DNA packaging YMR072W
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process YKL032C
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization YPR052C
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus YPR052C
GO:0048311
IEA
PLAZA Integrative Orthologymitochondrion distribution YMR072W
GO:0051276
IEA
EggNOGmapperchromosome organization
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process YKL032C
GO:0048308
IEA
PLAZA Integrative Orthologyorganelle inheritance YMR072W
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization YMR072W
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress YPR052C
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization YPR052C
GO:0034724
IEA
PLAZA Integrative OrthologyDNA replication-independent nucleosome organization YPR052C
GO:0034728
IEA
PLAZA Integrative Orthologynucleosome organization YPR052C
GO:2000819
IEA
PLAZA Integrative Orthologyregulation of nucleotide-excision repair YKL032C
GO:0006385
IEA
PLAZA Integrative Orthologytranscription elongation from RNA polymerase III promoter YPR052C
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process YKL032C
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process YKL032C
GO:0006384
IEA
PLAZA Integrative Orthologytranscription initiation from RNA polymerase III promoter YPR052C
GO:0006383
IEA
PLAZA Integrative Orthologytranscription by RNA polymerase III YPR052C
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process YKL032C
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process YKL032C
GO:0006974
IEA
PLAZA Integrative Orthologycellular response to DNA damage stimulus YKL032C
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process YKL032C
GO:0006298
IEA
PLAZA Integrative Orthologymismatch repair YPR052C
GO:0006333
IEA
PLAZA Integrative Orthologychromatin assembly or disassembly YPR052C
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly YPR052C
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly YPR052C
GO:0051646
IEA
PLAZA Integrative Orthologymitochondrion localization YMR072W
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process YKL032C
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly YPR052C
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated YKL032C
GO:0001666
IEA
PLAZA Integrative Orthologyresponse to hypoxia YKL032C
GO:0051641
IEA
PLAZA Integrative Orthologycellular localization YMR072W
GO:0051640
IEA
PLAZA Integrative Orthologyorganelle localization YMR072W
GO:0051123
IEA
PLAZA Integrative OrthologyRNA polymerase II preinitiation complex assembly YPR052C
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process YKL032C
GO:0006323
IEA
PLAZA Integrative OrthologyDNA packaging YMR072W
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process YKL032C
GO:0006325
IEA
EggNOGmapperchromatin organization
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress YKL032C
GO:0006289
IEA
PLAZA Integrative Orthologynucleotide-excision repair YKL032C
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress YKL032C
GO:0006282
IEA
PLAZA Integrative Orthologyregulation of DNA repair YKL032C
GO:0006281
IEA
PLAZA Integrative OrthologyDNA repair YPR052C

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding YPR052C
GO:0031491
IEA
PLAZA Integrative Orthologynucleosome binding YPR052C
GO:0043565
IEA
PLAZA Integrative Orthologysequence-specific DNA binding YPR052C
GO:0044877
IEA
PLAZA Integrative Orthologyprotein-containing complex binding YPR052C
GO:0008301
IEA
PLAZA Integrative OrthologyDNA binding, bending YPR052C
GO:0003677
IEA
PLAZA Integrative OrthologyDNA binding YMR072W
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding YPR052C
GO:0003684
IEA
PLAZA Integrative Orthologydamaged DNA binding YKL032C
GO:0003682
IEA
EggNOGmapperchromatin binding
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding YPR052C
GO:0005488
IEA
PLAZA Integrative Orthologybinding YPR052C

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen YMR072W
GO:0042645
IEA
PLAZA Integrative Orthologymitochondrial nucleoid YMR072W
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part YKL032C
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part YPR052C
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YPR052C
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part YPR052C
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part YMR072W
GO:0009295
IEA
PLAZA Integrative Orthologynucleoid YMR072W
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YPR052C
GO:0000790
IEA
EggNOGmappernuclear chromatin
GO:0000785
IEA
PLAZA Integrative Orthologychromatin YKL032C
GO:0000262
IEA
PLAZA Integrative Orthologymitochondrial chromosome YMR072W
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YMR072W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm YMR072W
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular YPR052C
GO:0044464
IEA
PLAZA Integrative Orthologycell part YPR052C
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen YMR072W
GO:0032301
IEA
PLAZA Integrative OrthologyMutSalpha complex YPR052C
GO:0032300
IEA
PLAZA Integrative Orthologymismatch repair complex YPR052C
GO:0005694
IEA
PLAZA Integrative Orthologychromosome YMR072W
GO:1990391
IEA
PLAZA Integrative OrthologyDNA repair complex YPR052C
GO:0044454
IEA
PLAZA Integrative Orthologynuclear chromosome part YKL032C
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen YKL032C
GO:0005759
IEA
PLAZA Integrative Orthologymitochondrial matrix YMR072W
GO:0005634
IEA
PLAZA Integrative Orthologynucleus YPR052C
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YPR052C
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YMR072W
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome YKL032C
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle YMR072W
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen YMR072W
GO:0000229
IEA
PLAZA Integrative Orthologycytoplasmic chromosome YMR072W
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle YPR052C
GO:0005623
IEA
PLAZA Integrative Orthologycell YPR052C
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle YPR052C
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle YMR072W
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle YPR052C
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle YPR052C

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR036910High mobility group box domain superfamily
IPR009071High mobility group box domain

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.