Gene: Sro1521_g279460 (Seminavis robusta)

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Gene Identifier
Sro1521_g279460
Transcript Identifier
Sro1521_g279460.1
Gene Type
Coding gene
Location
Sro_contig1521 : 6296-7939 : negative

Family Information

Homologous gene family
HOM02SEM000004
(1168 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000126
(165 genes in 26 species)
specific family

Descriptions

eggnog_description
DEAD/DEAH box helicase
annomine_description
dependent RNA helicase

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process YDR194C
GO:0000372
IEA
PLAZA Integrative OrthologyGroup I intron splicing YDR194C
GO:0000373
IEA
PLAZA Integrative OrthologyGroup II intron splicing YDR194C
GO:0000375
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions YDR194C
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT5G08620
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT5G08620
GO:0000963
IEA
PLAZA Integrative Orthologymitochondrial RNA processing YDR194C
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing YDR194C
GO:0006354
IEA
PLAZA Integrative OrthologyDNA-templated transcription, elongation YDR194C
GO:0006392
IEA
PLAZA Integrative Orthologytranscription elongation from mitochondrial promoter YDR194C
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated YDR194C
GO:0009266
IEA
EggNOGmapperresponse to temperature stimulus
GO:0006390
IEA
PLAZA Integrative Orthologymitochondrial transcription YDR194C
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G08620
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G08620
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process YDR194C
GO:0009409
IEA
EggNOGmapperresponse to cold
GO:0009414
IEA
EggNOGmapperresponse to water deprivation
GO:0009415
IEA
EggNOGmapperresponse to water
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process YDR194C
GO:0009651
IEA
EggNOGmapperresponse to salt stress
GO:0034337
IEA
PLAZA Integrative OrthologyRNA folding YDR194C
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription YDR194C
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G08620
GO:0006970
IEA
PLAZA Integrative Orthologyresponse to osmotic stress AT5G08620
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process YDR194C
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT5G08620
GO:0000376
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions with guanosine as nucleophile YDR194C
GO:0000377
IEA
PLAZA Integrative OrthologyRNA splicing, via transesterification reactions with bulged adenosine as nucleophile YDR194C
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT5G08620
GO:0008380
IEA
EggNOGmapperRNA splicing
GO:0009207
IEA
EggNOGmapperpurine ribonucleoside triphosphate catabolic process
GO:0009166
IEA
EggNOGmappernucleotide catabolic process
GO:0009169
IEA
EggNOGmapperpurine ribonucleoside monophosphate catabolic process
GO:0006195
IEA
EggNOGmapperpurine nucleotide catabolic process
GO:0009150
IEA
EggNOGmapperpurine ribonucleotide metabolic process
GO:0032543
IEA
EggNOGmappermitochondrial translation
GO:0046034
IEA
EggNOGmapperATP metabolic process
GO:0048856
IEA
EggNOGmapperanatomical structure development
GO:0046130
IEA
EggNOGmapperpurine ribonucleoside catabolic process
GO:0009154
IEA
EggNOGmapperpurine ribonucleotide catabolic process
GO:0007275
IEA
EggNOGmappermulticellular organism development
GO:0007005
IEA
EggNOGmappermitochondrion organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017111
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase activity YDR194C
GO:0016462
IEA
PLAZA Integrative Orthologypyrophosphatase activity YDR194C
GO:0016818
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides YDR194C
GO:0016817
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides YDR194C
GO:0033592
IEA
PLAZA Integrative OrthologyRNA strand annealing activity YDR194C
GO:0140098
IEA
PLAZA Integrative Orthologycatalytic activity, acting on RNA YDR194C
GO:0004004
IEA
EggNOGmapperATP-dependent RNA helicase activity
GO:0097617
IEA
PLAZA Integrative Orthologyannealing activity YDR194C
GO:0070035
IEA
PLAZA Integrative Orthologypurine NTP-dependent helicase activity YDR194C
GO:0042623
IEA
PLAZA Integrative OrthologyATPase activity, coupled YDR194C
GO:0003729
IEA
PLAZA Integrative OrthologymRNA binding YDR194C
GO:0003727
IEA
PLAZA Integrative Orthologysingle-stranded RNA binding YDR194C
GO:0003725
IEA
PLAZA Integrative Orthologydouble-stranded RNA binding YDR194C
GO:0003724
IEA
PLAZA Integrative OrthologyRNA helicase activity YDR194C
GO:0003723
IEA
EggNOGmapperRNA binding
GO:0004386
IEA
PLAZA Integrative Orthologyhelicase activity YDR194C
GO:0008186
IEA
EggNOGmapperRNA-dependent ATPase activity
GO:0008026
IEA
EggNOGmapperATP-dependent helicase activity
GO:0016887
IEA
PLAZA Integrative OrthologyATPase activity YDR194C
GO:0005524
IEA
EggNOGmapperATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0035639
IEA
EggNOGmapperpurine ribonucleoside triphosphate binding
GO:0030554
IEA
EggNOGmapperadenyl nucleotide binding
GO:0032550
IEA
EggNOGmapperpurine ribonucleoside binding
GO:0032559
IEA
EggNOGmapperadenyl ribonucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen YDR194C
GO:0005739
IEA
EggNOGmappermitochondrion
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPBC691.04
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPBC691.04
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPBC691.04
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part YDR194C
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPBC691.04
GO:0044429
IEA
PLAZA Integrative Orthologymitochondrial part YDR194C
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen YDR194C
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT5G08610
GO:0005759
IEA
EggNOGmappermitochondrial matrix
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part YDR194C
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC691.04
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen YDR194C
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC691.04
GO:0009507
IEA
EggNOGmapperchloroplast
GO:0005623
IEA
PLAZA Integrative Orthologycell SPBC691.04
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC691.04
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC691.04
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC691.04

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001650Helicase, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR014014RNA helicase, DEAD-box type, Q motif
IPR027417P-loop containing nucleoside triphosphate hydrolase

No MapMan annotations defined for this gene.
KeggID Description
K17679MSS116; ATP-dependent RNA helicase MSS116, mitochondrial [EC:3.6.4.13]
No chloroplast target sequence found.