Gene: SPBC725.11c (Schizosaccharomyces pombe)

Overview top

Gene Identifier
SPBC725.11c
Transcript Identifier
SPBC725.11c.1
Gene Type
Coding gene
Location
II : 1225910-1226914 : negative

Family Information

Homologous gene family
HOM02SEM002031
(32 genes in 16 species)
specific family

Descriptions

gene_descr
CCAAT-binding factor complex subunit Php2

Identifiers

Type Value
pidSPBC725.11c.1:pep
UniprotP24488
RefSeq_mRNANM_001021402
EMBLCU329671
EMBLM63639

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033217
IMP
Genome Projectregulation of transcription from RNA polymerase II promoter in response to iron ion starvation
GO:0033217
IMP
Gene Ontologyregulation of transcription from RNA polymerase II promoter in response to iron ion starvation1
GO:0006109
ISO
Genome Projectregulation of carbohydrate metabolic process
GO:0006109
ISO
Gene Ontologyregulation of carbohydrate metabolic process
GO:0071229
IEA
PLAZA Integrative Orthologycellular response to acid chemical AT1G54160
GO:0006909
IEA
PLAZA Integrative Orthologyphagocytosis FBgn0035993
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0035993
GO:0046331
IEA
PLAZA Integrative Orthologylateral inhibition FBgn0035993
GO:0006629
IEA
PLAZA Integrative Orthologylipid metabolic process ENSG00000001167
GO:0010605
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule metabolic process AT2G34720
GO:0048510
IEA
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT2G34720
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process YGL237C
GO:0048592
IEA
PLAZA Integrative Orthologyeye morphogenesis FBgn0035993
GO:0051234
IEA
PLAZA Integrative Orthologyestablishment of localization FBgn0035993
GO:0009737
IEA
PLAZA Integrative Orthologyresponse to abscisic acid AT1G54160
GO:1903508
IEA
PLAZA Integrative Orthologypositive regulation of nucleic acid-templated transcription YGL237C
GO:0009738
IEA
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT1G54160
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT1G54160
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle FBgn0035993
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0035993
GO:1901615
IEA
PLAZA Integrative Orthologyorganic hydroxy compound metabolic process ENSG00000001167
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT1G54160
GO:0048506
IEA
PLAZA Integrative Orthologyregulation of timing of meristematic phase transition AT2G34720
GO:0048749
IEA
PLAZA Integrative Orthologycompound eye development FBgn0035993
GO:0048507
IEA
PLAZA Integrative Orthologymeristem development AT2G34720
GO:0043457
IEA
PLAZA Integrative Orthologyregulation of cellular respiration YGL237C
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT1G54160
GO:0048229
IEA
PLAZA Integrative Orthologygametophyte development AT3G20910
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction AT1G54160
GO:0015980
IEA
PLAZA Integrative Orthologyenergy derivation by oxidation of organic compounds YGL237C
GO:0048509
IEA
PLAZA Integrative Orthologyregulation of meristem development AT2G34720
GO:0044703
IEA
PLAZA Integrative Orthologymulti-organism reproductive process AT3G05690
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT1G54160
GO:0050810
IEA
PLAZA Integrative Orthologyregulation of steroid biosynthetic process ENSG00000001167
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT1G54160
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT2G34720
GO:0010557
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule biosynthetic process YGL237C
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation AT1G54160
GO:0010558
IEA
PLAZA Integrative Orthologynegative regulation of macromolecule biosynthetic process AT2G34720
GO:0097305
IEA
PLAZA Integrative Orthologyresponse to alcohol AT1G54160
GO:0097306
IEA
PLAZA Integrative Orthologycellular response to alcohol AT1G54160
GO:0045990
IEA
PLAZA Integrative Orthologycarbon catabolite regulation of transcription YGL237C
GO:0046165
IEA
PLAZA Integrative Orthologyalcohol biosynthetic process ENSG00000001167
GO:0045991
IEA
PLAZA Integrative Orthologycarbon catabolite activation of transcription YGL237C
GO:1903507
IEA
PLAZA Integrative Orthologynegative regulation of nucleic acid-templated transcription AT2G34720
GO:0048699
IEA
PLAZA Integrative Orthologygeneration of neurons FBgn0035993
GO:0045466
IEA
PLAZA Integrative OrthologyR7 cell differentiation FBgn0035993
GO:1902653
IEA
PLAZA Integrative Orthologysecondary alcohol biosynthetic process ENSG00000001167
GO:0006066
IEA
PLAZA Integrative Orthologyalcohol metabolic process ENSG00000001167
GO:0007399
IEA
PLAZA Integrative Orthologynervous system development FBgn0035993
GO:1902930
IEA
PLAZA Integrative Orthologyregulation of alcohol biosynthetic process ENSG00000001167
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT2G34720
GO:0090596
IEA
PLAZA Integrative Orthologysensory organ morphogenesis FBgn0035993
GO:1902652
IEA
PLAZA Integrative Orthologysecondary alcohol metabolic process ENSG00000001167
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT1G54160
GO:0019953
IEA
PLAZA Integrative Orthologysexual reproduction AT3G05690
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus AT1G54160
GO:0032870
IEA
PLAZA Integrative Orthologycellular response to hormone stimulus AT1G54160
GO:0010628
IEA
PLAZA Integrative Orthologypositive regulation of gene expression YGL237C
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT1G54160
GO:0001754
IEA
PLAZA Integrative Orthologyeye photoreceptor cell differentiation FBgn0035993
GO:0051179
IEA
PLAZA Integrative Orthologylocalization FBgn0035993
GO:0010629
IEA
PLAZA Integrative Orthologynegative regulation of gene expression AT2G34720
GO:0001751
IEA
PLAZA Integrative Orthologycompound eye photoreceptor cell differentiation FBgn0035993
GO:0009887
IEA
PLAZA Integrative Orthologyanimal organ morphogenesis FBgn0035993
GO:0009888
IEA
PLAZA Integrative Orthologytissue development AT2G34720
GO:0006810
IEA
PLAZA Integrative Orthologytransport FBgn0035993
GO:0006897
IEA
PLAZA Integrative Orthologyendocytosis FBgn0035993
GO:0045333
IEA
PLAZA Integrative Orthologycellular respiration YGL237C
GO:0007584
IEA
PLAZA Integrative Orthologyresponse to nutrient YGL237C
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT1G54160
GO:0000429
IEA
PLAZA Integrative Orthologycarbon catabolite regulation of transcription from RNA polymerase II promoter YGL237C
GO:0030182
IEA
PLAZA Integrative Orthologyneuron differentiation FBgn0035993
GO:0031670
IEA
PLAZA Integrative Orthologycellular response to nutrient YGL237C
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT1G54160
GO:0006091
IEA
PLAZA Integrative Orthologygeneration of precursor metabolites and energy YGL237C
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus AT1G54160
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle FBgn0035993
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus AT1G54160
GO:0071215
IEA
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT1G54160
GO:0001745
IEA
PLAZA Integrative Orthologycompound eye morphogenesis FBgn0035993
GO:0098657
IEA
PLAZA Integrative Orthologyimport into cell FBgn0035993
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT1G54160
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT1G54160
GO:0009755
IEA
PLAZA Integrative Orthologyhormone-mediated signaling pathway AT1G54160
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT1G54160
GO:0009637
IEA
PLAZA Integrative Orthologyresponse to blue light AT1G54160
GO:1901701
IEA
PLAZA Integrative Orthologycellular response to oxygen-containing compound AT1G54160
GO:0045168
IEA
PLAZA Integrative Orthologycell-cell signaling involved in cell fate commitment FBgn0035993
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process YGL237C
GO:0048316
IEA
PLAZA Integrative Orthologyseed development AT1G54160
GO:0051172
IEA
PLAZA Integrative Orthologynegative regulation of nitrogen compound metabolic process AT2G34720
GO:0040034
IEA
PLAZA Integrative Orthologyregulation of development, heterochronic AT2G34720
GO:0031324
IEA
PLAZA Integrative Orthologynegative regulation of cellular metabolic process AT2G34720
GO:0019218
IEA
PLAZA Integrative Orthologyregulation of steroid metabolic process ENSG00000001167
GO:0019216
IEA
PLAZA Integrative Orthologyregulation of lipid metabolic process ENSG00000001167
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process YGL237C
GO:0055114
IEA
PLAZA Integrative Orthologyoxidation-reduction process YGL237C
GO:0045165
IEA
PLAZA Integrative Orthologycell fate commitment FBgn0035993
GO:0046530
IEA
PLAZA Integrative Orthologyphotoreceptor cell differentiation FBgn0035993
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process YGL237C
GO:0001654
IEA
PLAZA Integrative Orthologyeye development FBgn0035993
GO:0031327
IEA
PLAZA Integrative Orthologynegative regulation of cellular biosynthetic process AT2G34720
GO:0046890
IEA
PLAZA Integrative Orthologyregulation of lipid biosynthetic process ENSG00000001167
GO:0009785
IEA
PLAZA Integrative Orthologyblue light signaling pathway AT1G54160
GO:0008610
IEA
PLAZA Integrative Orthologylipid biosynthetic process ENSG00000001167
GO:0030522
IEA
PLAZA Integrative Orthologyintracellular receptor signaling pathway AT1G54160
GO:0051704
IEA
PLAZA Integrative Orthologymulti-organism process AT3G05690
GO:0033993
IEA
PLAZA Integrative Orthologyresponse to lipid AT1G54160
GO:0106118
IEA
PLAZA Integrative Orthologyregulation of sterol biosynthetic process ENSG00000001167
GO:0071396
IEA
PLAZA Integrative Orthologycellular response to lipid AT1G54160
GO:0071310
IEA
PLAZA Integrative Orthologycellular response to organic substance AT1G54160
GO:0016192
IEA
PLAZA Integrative Orthologyvesicle-mediated transport FBgn0035993
GO:0009414
IEA
PLAZA Integrative Orthologyresponse to water deprivation AT1G54160
GO:0009415
IEA
PLAZA Integrative Orthologyresponse to water AT1G54160
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus AT1G54160
GO:0045944
IEA
PLAZA Integrative Orthologypositive regulation of transcription by RNA polymerase II YGL237C
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis FBgn0035993
GO:0000436
IEA
PLAZA Integrative Orthologycarbon catabolite activation of transcription from RNA polymerase II promoter YGL237C
GO:0008202
IEA
PLAZA Integrative Orthologysteroid metabolic process ENSG00000001167
GO:0008203
IEA
PLAZA Integrative Orthologycholesterol metabolic process ENSG00000001167
GO:0009890
IEA
PLAZA Integrative Orthologynegative regulation of biosynthetic process AT2G34720
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process YGL237C
GO:0009892
IEA
PLAZA Integrative Orthologynegative regulation of metabolic process AT2G34720
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process YGL237C
GO:0016126
IEA
PLAZA Integrative Orthologysterol biosynthetic process ENSG00000001167
GO:0016125
IEA
PLAZA Integrative Orthologysterol metabolic process ENSG00000001167
GO:0023052
IEA
PLAZA Integrative Orthologysignaling AT1G54160
GO:0009719
IEA
PLAZA Integrative Orthologyresponse to endogenous stimulus AT1G54160
GO:0150063
IEA
PLAZA Integrative Orthologyvisual system development FBgn0035993
GO:0051254
IEA
PLAZA Integrative Orthologypositive regulation of RNA metabolic process YGL237C
GO:0045540
IEA
PLAZA Integrative Orthologyregulation of cholesterol biosynthetic process ENSG00000001167
GO:0051253
IEA
PLAZA Integrative Orthologynegative regulation of RNA metabolic process AT2G34720
GO:0071483
IEA
PLAZA Integrative Orthologycellular response to blue light AT1G54160
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus AT1G54160
GO:0090181
IEA
PLAZA Integrative Orthologyregulation of cholesterol metabolic process ENSG00000001167
GO:0007423
IEA
PLAZA Integrative Orthologysensory organ development FBgn0035993
GO:0045934
IEA
PLAZA Integrative Orthologynegative regulation of nucleobase-containing compound metabolic process AT2G34720
GO:0009725
IEA
PLAZA Integrative Orthologyresponse to hormone AT1G54160
GO:0006694
IEA
PLAZA Integrative Orthologysteroid biosynthetic process ENSG00000001167
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process AT2G34720
GO:0009566
IEA
PLAZA Integrative Orthologyfertilization AT3G05690
GO:0007267
IEA
PLAZA Integrative Orthologycell-cell signaling FBgn0035993
GO:0006695
IEA
PLAZA Integrative Orthologycholesterol biosynthetic process ENSG00000001167
GO:0009567
IEA
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT3G05690
GO:0062012
IEA
PLAZA Integrative Orthologyregulation of small molecule metabolic process ENSG00000001167
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process YGL237C
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance AT1G54160
GO:0010154
IEA
PLAZA Integrative Orthologyfruit development AT1G54160
GO:1902680
IEA
PLAZA Integrative Orthologypositive regulation of RNA biosynthetic process YGL237C
GO:0055046
IEA
PLAZA Integrative Orthologymicrogametogenesis AT3G20910
GO:2000113
IEA
PLAZA Integrative Orthologynegative regulation of cellular macromolecule biosynthetic process AT2G34720
GO:0071495
IEA
PLAZA Integrative Orthologycellular response to endogenous stimulus AT1G54160
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated YGL237C
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process YGL237C
GO:0045892
IEA
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT2G34720
GO:0044283
IEA
PLAZA Integrative Orthologysmall molecule biosynthetic process ENSG00000001167
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process AT2G34720
GO:0048880
IEA
PLAZA Integrative Orthologysensory system development FBgn0035993
GO:1901617
IEA
PLAZA Integrative Orthologyorganic hydroxy compound biosynthetic process ENSG00000001167
GO:0044281
IEA
PLAZA Integrative Orthologysmall molecule metabolic process ENSG00000001167
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT1G54160
GO:1902679
IEA
PLAZA Integrative Orthologynegative regulation of RNA biosynthetic process AT2G34720
GO:0043467
IEA
PLAZA Integrative Orthologyregulation of generation of precursor metabolites and energy YGL237C
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process YGL237C
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process AT2G34720
GO:0048513
IEA
PLAZA Integrative Orthologyanimal organ development FBgn0035993
GO:0022008
IEA
PLAZA Integrative Orthologyneurogenesis FBgn0035993
GO:0009555
IEA
PLAZA Integrative Orthologypollen development AT3G20910
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation AT1G54160
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT1G54160
GO:0009793
IEA
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G54160
GO:0009790
IEA
PLAZA Integrative Orthologyembryo development AT1G54160
GO:0010262
IEA
PLAZA Integrative Orthologysomatic embryogenesis AT1G54160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000979
IDA
Genome ProjectRNA polymerase II core promoter sequence-specific DNA binding
GO:0000979
IDA
Gene OntologyRNA polymerase II core promoter sequence-specific DNA binding2
GO:0043565
IDA
Genome Projectsequence-specific DNA binding
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding1
GO:0000978
IMP
Genome ProjectRNA polymerase II proximal promoter sequence-specific DNA binding
GO:0000978
IMP
Gene OntologyRNA polymerase II proximal promoter sequence-specific DNA binding3
GO:0035326
IEA
PLAZA Integrative Orthologyenhancer binding ENSG00000001167
GO:0003700
IEA
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G72830
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT2G34720
GO:0001158
IEA
PLAZA Integrative Orthologyenhancer sequence-specific DNA binding ENSG00000001167
GO:0140110
IEA
PLAZA Integrative Orthologytranscription regulator activity AT1G72830
GO:0000980
IEA
PLAZA Integrative OrthologyRNA polymerase II distal enhancer sequence-specific DNA binding ENSG00000001167

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISO
Genome Projectnucleus
GO:0005634
Gene Ontologynucleus4
GO:0016602
ISO
Genome ProjectCCAAT-binding factor complex
GO:0016602
ISO
Gene OntologyCCAAT-binding factor complex
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000001167
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000001167
GO:0032993
IEA
PLAZA Integrative Orthologyprotein-DNA complex ENSG00000001167
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000001167
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000001167
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000001167

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001289Nuclear transcription factor Y subunit A
IPR018362CCAAT-binding factor, conserved site

No MapMan annotations defined for this gene.
KeggID Description
K08064NFYA; nuclear transcription factor Y, alpha
No chloroplast target sequence found.