Gene: SPBC1734.06 (Schizosaccharomyces pombe)

Overview top

Gene Identifier
SPBC1734.06
Transcript Identifier
SPBC1734.06.1
Gene Type
Coding gene
Location
II : 1070258-1071421 : positive

Family Information

Homologous gene family
HOM02SEM014407
(6 genes in 6 species)
specific family

Descriptions

gene_descr
Rad18 homolog ubiquitin protein ligase E3, Rhp18

Identifiers

Type Value
pidSPBC1734.06.1:pep
UniprotO74747
RefSeq_mRNANM_001021331
EMBLAB079544
EMBLCU329671

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901044
IMP
Genome Projectprotein polyubiquitination involved in nucleus-associated proteasomal ubiquitin-dependent protein catabolic process
GO:1990920
IMP
Genome Projectproteasome localization to nuclear periphery
GO:1990920
IMP
Gene Ontologyproteasome localization to nuclear periphery1
GO:0006301
IMP
Genome Projectpostreplication repair
GO:0006301
IMP
Gene Ontologypostreplication repair2
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process ENSG00000070950
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process YCR066W
GO:0006513
IEA
PLAZA Integrative Orthologyprotein monoubiquitination YCR066W
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process YCR066W
GO:0042769
IEA
PLAZA Integrative OrthologyDNA damage response, detection of DNA damage ENSG00000070950
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process YCR066W
GO:0051865
IEA
PLAZA Integrative Orthologyprotein autoubiquitination ENSG00000070950
GO:0070987
IEA
PLAZA Integrative Orthologyerror-free translesion synthesis YCR066W
GO:0019985
IEA
PLAZA Integrative Orthologytranslesion synthesis YCR066W
GO:0051984
IEA
PLAZA Integrative Orthologypositive regulation of chromosome segregation ENSG00000070950
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process YCR066W
GO:0051983
IEA
PLAZA Integrative Orthologyregulation of chromosome segregation ENSG00000070950
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process YCR066W
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process YCR066W
GO:0042276
IEA
PLAZA Integrative Orthologyerror-prone translesion synthesis YCR066W
GO:0060548
IEA
PLAZA Integrative Orthologynegative regulation of cell death ENSG00000070950
GO:0042275
IEA
PLAZA Integrative Orthologyerror-free postreplication DNA repair YCR066W
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process YCR066W
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process YCR066W
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process YCR066W
GO:0010941
IEA
PLAZA Integrative Orthologyregulation of cell death ENSG00000070950
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process YCR066W
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process ENSG00000070950
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation ENSG00000070950
GO:0051606
IEA
PLAZA Integrative Orthologydetection of stimulus ENSG00000070950
GO:0071897
IEA
PLAZA Integrative OrthologyDNA biosynthetic process YCR066W
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000070950
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000070950
GO:0008219
IEA
PLAZA Integrative Orthologycell death ENSG00000070950
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000070950
GO:0000731
IEA
PLAZA Integrative OrthologyDNA synthesis involved in DNA repair YCR066W
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process ENSG00000070950
GO:0007059
IEA
PLAZA Integrative Orthologychromosome segregation ENSG00000070950
GO:0036297
IMP
Gene Ontologyinterstrand cross-link repair3
GO:0043161
IMP
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Genome Projectzinc ion binding
GO:0003684
IEA
Genome Projectdamaged DNA binding
GO:0061630
IMP
Genome Projectubiquitin protein ligase activity
GO:0061630
IMP
Gene Ontologyubiquitin protein ligase activity1
GO:0019899
IEA
PLAZA Integrative Orthologyenzyme binding ENSG00000070950
GO:0016787
IEA
PLAZA Integrative Orthologyhydrolase activity YCR066W
GO:0017111
IEA
PLAZA Integrative Orthologynucleoside-triphosphatase activity YCR066W
GO:0016462
IEA
PLAZA Integrative Orthologypyrophosphatase activity YCR066W
GO:0043142
IEA
PLAZA Integrative Orthologysingle-stranded DNA-dependent ATPase activity YCR066W
GO:0000403
IEA
PLAZA Integrative OrthologyY-form DNA binding ENSG00000070950
GO:0044389
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase binding ENSG00000070950
GO:0016818
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides YCR066W
GO:0016817
IEA
PLAZA Integrative Orthologyhydrolase activity, acting on acid anhydrides YCR066W
GO:0008094
IEA
PLAZA Integrative OrthologyDNA-dependent ATPase activity YCR066W
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding ENSG00000070950
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000070950
GO:0031625
IEA
PLAZA Integrative Orthologyubiquitin protein ligase binding ENSG00000070950
GO:0042623
IEA
PLAZA Integrative OrthologyATPase activity, coupled YCR066W
GO:0031593
IEA
PLAZA Integrative Orthologypolyubiquitin modification-dependent protein binding ENSG00000070950
GO:0140030
IEA
PLAZA Integrative Orthologymodification-dependent protein binding ENSG00000070950
GO:0003697
IEA
PLAZA Integrative Orthologysingle-stranded DNA binding YCR066W
GO:0044877
IEA
PLAZA Integrative Orthologyprotein-containing complex binding ENSG00000070950
GO:0000217
IEA
PLAZA Integrative OrthologyDNA secondary structure binding ENSG00000070950
GO:0016887
IEA
PLAZA Integrative OrthologyATPase activity YCR066W

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000790
IC
Genome Projectnuclear chromatin
GO:0000790
IC
Gene Ontologynuclear chromatin2
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part ENSG00000070950
GO:0005815
IEA
PLAZA Integrative Orthologymicrotubule organizing center ENSG00000070950
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton ENSG00000070950
GO:0005813
IEA
PLAZA Integrative Orthologycentrosome ENSG00000070950
GO:0005657
IEA
PLAZA Integrative Orthologyreplication fork ENSG00000070950
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex YCR066W
GO:0042405
IEA
PLAZA Integrative Orthologynuclear inclusion body ENSG00000070950
GO:0016234
IEA
PLAZA Integrative Orthologyinclusion body ENSG00000070950
GO:0097505
IEA
PLAZA Integrative OrthologyRad6-Rad18 complex YCR066W
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000070950
GO:0035861
IEA
PLAZA Integrative Orthologysite of double-strand break ENSG00000070950
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex YCR066W
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex YCR066W
GO:0000151
IEA
PLAZA Integrative Orthologyubiquitin ligase complex YCR066W
GO:0044451
IEA
PLAZA Integrative Orthologynucleoplasm part ENSG00000070950
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton ENSG00000070950
GO:0016604
IEA
PLAZA Integrative Orthologynuclear body ENSG00000070950
GO:0090734
IEA
PLAZA Integrative Orthologysite of DNA damage ENSG00000070950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR003034SAP domain
IPR004580DNA repair protein Rad18, fungi
IPR006642Zinc finger, Rad18-type putative
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR017907Zinc finger, RING-type, conserved site

No MapMan annotations defined for this gene.
KeggID Description
K10627RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
No chloroplast target sequence found.