Gene: Pp3c3_5910 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c3_5910
Transcript Identifier
Pp3c3_5910V3.3
Gene Type
Coding gene
Location
Chr03 : 3884213-3886692 : negative

Family Information

Homologous gene family
HOM02SEM004348
(18 genes in 3 species)
specific family
Duplication type
Block duplicate

Descriptions

Identifiers

Type Value
namePp3c3_5910V3.3
tidPAC:32941620
aliasPhpat.003G023600
aliasPp1s1_825V6
pacid32941620

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
InterProregulation of gene expression
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT3G62210
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT3G62210
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation AT3G62210
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT5G64710
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process AT5G64710
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT2G15560
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process AT3G62210
GO:0009987
IEA
PLAZA Integrative Orthologycellular process AT5G64710
GO:0000741
IEA
PLAZA Integrative Orthologykaryogamy AT3G62210
GO:0006997
IEA
PLAZA Integrative Orthologynucleus organization AT3G62210
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process AT5G64710
GO:0000963
IEA
PLAZA Integrative Orthologymitochondrial RNA processing AT5G64710
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT3G62210
GO:0006396
IEA
PLAZA Integrative OrthologyRNA processing AT5G64710
GO:0048229
IEA
PLAZA Integrative Orthologygametophyte development AT3G62210
GO:0000964
IEA
PLAZA Integrative Orthologymitochondrial RNA 5'-end processing AT5G64710
GO:0000966
IEA
PLAZA Integrative OrthologyRNA 5'-end processing AT5G64710
GO:0010197
IEA
PLAZA Integrative Orthologypolar nucleus fusion AT3G62210
GO:0009561
IEA
PLAZA Integrative Orthologymegagametogenesis AT3G62210
GO:0140053
IEA
PLAZA Integrative Orthologymitochondrial gene expression AT5G64710
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT3G62210
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process AT5G64710
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT2G15560
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT3G62210
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process AT5G64710
GO:0048284
IEA
PLAZA Integrative Orthologyorganelle fusion AT3G62210
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process AT5G64710
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process AT5G64710
GO:0006979
IEA
PLAZA Integrative Orthologyresponse to oxidative stress AT2G15560
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT5G64710
GO:0009559
IEA
PLAZA Integrative Orthologyembryo sac central cell differentiation AT3G62210
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT5G64710
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT3G62210
GO:0009553
IEA
PLAZA Integrative Orthologyembryo sac development AT3G62210
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT3G62210
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process AT5G64710
GO:0000959
IEA
PLAZA Integrative Orthologymitochondrial RNA metabolic process AT5G64710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IEA
InterProperoxisome
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion AT5G64710
GO:0005634
IEA
PLAZA Homology (enrichment)nucleus HOM02SEM004348
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT5G61190
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT5G61190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR025605OST-HTH/LOTUS domain
IPR021139NYN domain, limkain-b1-type
IPR024768Meiosis regulator and mRNA stability factor 1
IPR029060PIN-like domain superfamily

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.