Gene: Pp3c3_24920 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c3_24920
Transcript Identifier
Pp3c3_24920V3.1
Gene Type
Coding gene
Location
Chr03 : 17057834-17060795 : negative

Family Information

Homologous gene family
HOM02SEM006153
(14 genes in 9 species)
specific family

Descriptions

Identifiers

Type Value
namePp3c3_24920V3.1
tidPAC:32944615
aliasPp1s333_57V6
aliasPhypa_172144
aliasPhpat.003G098200
pacid32944615

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000026
IEA
PLAZA Integrative Orthologyregulation of multicellular organismal development AT1G17145
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process SPBC25B2.03
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT1G17145
GO:0051239
IEA
PLAZA Integrative Orthologyregulation of multicellular organismal process AT1G17145
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus YMR140W
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress YMR140W
GO:0009987
IEA
PLAZA Integrative Orthologycellular process SPBC25B2.03
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT1G17145
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification SPBC25B2.03
GO:0048589
IEA
PLAZA Integrative Orthologydevelopmental growth AT1G17145
GO:0009267
IEA
PLAZA Integrative Orthologycellular response to starvation YMR140W
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT1G17145
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process SPBC25B2.03
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus YMR140W
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT1G17145
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT1G17145
GO:0048580
IEA
PLAZA Integrative Orthologyregulation of post-embryonic development AT1G17145
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress YMR140W
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process SPBC25B2.03
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus YMR140W
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process SPBC25B2.03
GO:0080113
IEA
PLAZA Integrative Orthologyregulation of seed growth AT1G17145
GO:0042594
IEA
PLAZA Integrative Orthologyresponse to starvation YMR140W
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process SPBC25B2.03
GO:0080112
IEA
PLAZA Integrative Orthologyseed growth AT1G17145
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process SPBC25B2.03
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT1G17145
GO:0007154
IEA
PLAZA Integrative Orthologycell communication YMR140W
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT1G17145
GO:0035265
IEA
PLAZA Integrative Orthologyorgan growth AT1G17145
GO:0016567
IEA
PLAZA Integrative Orthologyprotein ubiquitination AT1G17145
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process SPBC25B2.03
GO:0031667
IEA
PLAZA Integrative Orthologyresponse to nutrient levels YMR140W
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process SPBC25B2.03
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT1G17145
GO:0031669
IEA
PLAZA Integrative Orthologycellular response to nutrient levels YMR140W
GO:0031668
IEA
PLAZA Integrative Orthologycellular response to extracellular stimulus YMR140W
GO:0040007
IEA
PLAZA Integrative Orthologygrowth AT1G17145
GO:0042149
IEA
PLAZA Integrative Orthologycellular response to glucose starvation YMR140W
GO:0040008
IEA
PLAZA Integrative Orthologyregulation of growth AT1G17145
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process SPBC25B2.03
GO:0046620
IEA
PLAZA Integrative Orthologyregulation of organ growth AT1G17145
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT1G17145
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT1G17145
GO:0010154
IEA
PLAZA Integrative Orthologyfruit development AT1G17145
GO:0032446
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation AT1G17145
GO:0071496
IEA
PLAZA Integrative Orthologycellular response to external stimulus YMR140W
GO:0070647
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation or removal SPBC25B2.03
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process AT1G17145
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT1G17145
GO:0048638
IEA
PLAZA Integrative Orthologyregulation of developmental growth AT1G17145
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT1G17145
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process SPBC25B2.03
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process SPBC25B2.03
GO:0048316
IEA
PLAZA Integrative Orthologyseed development AT1G17145
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT1G17145
GO:2000241
IEA
PLAZA Integrative Orthologyregulation of reproductive process AT1G17145
GO:0009991
IEA
PLAZA Integrative Orthologyresponse to extracellular stimulus YMR140W
GO:0080050
IEA
PLAZA Integrative Orthologyregulation of seed development AT1G17145
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process SPBC25B2.03

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity AT1G78420
GO:0004842
IEA
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT1G78420
GO:0140096
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a protein AT1G78420
GO:0019787
IEA
PLAZA Integrative Orthologyubiquitin-like protein transferase activity AT1G78420
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity AT1G78420
GO:0061630
IEA
PLAZA Integrative Orthologyubiquitin protein ligase activity AT1G78420
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G78420
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT1G78420
GO:0061659
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase activity AT1G78420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane SPBC25B2.03
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system SPBC25B2.03
GO:0016020
IEA
PLAZA Integrative Orthologymembrane SPBC25B2.03
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPBC25B2.03
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPBC25B2.03
GO:0000322
IEA
PLAZA Integrative Orthologystorage vacuole SPBC25B2.03
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPBC25B2.03
GO:0000323
IEA
PLAZA Integrative Orthologylytic vacuole SPBC25B2.03
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane SPBC25B2.03
GO:0000324
IEA
PLAZA Integrative Orthologyfungal-type vacuole SPBC25B2.03
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPBC25B2.03
GO:0005783
IEA
PLAZA Integrative Orthologyendoplasmic reticulum SPBC25B2.03
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPBC25B2.03
GO:0000329
IEA
PLAZA Integrative Orthologyfungal-type vacuole membrane SPBC25B2.03
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane SPBC25B2.03
GO:0005773
IEA
PLAZA Integrative Orthologyvacuole SPBC25B2.03
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle SPBC25B2.03
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPBC25B2.03
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPBC25B2.03
GO:0098852
IEA
PLAZA Integrative Orthologylytic vacuole membrane SPBC25B2.03
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC25B2.03
GO:0044437
IEA
PLAZA Integrative Orthologyvacuolar part SPBC25B2.03
GO:0005623
IEA
PLAZA Integrative Orthologycell SPBC25B2.03
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC25B2.03
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC25B2.03
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus SPBC25B2.03
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC25B2.03

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003903Ubiquitin interacting motif

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.