Gene: Pp3c2_15860 (Physcomitrella patens)

Overview top

Gene Identifier
Pp3c2_15860
Transcript Identifier
Pp3c2_15860V3.4
Gene Type
Coding gene
Location
Chr02 : 10731064-10735762 : positive

Family Information

Homologous gene family
HOM02SEM002253
(30 genes in 9 species)
specific family

Descriptions

Identifiers

Type Value
namePp3c2_15860V3.4
tidPAC:32932734
aliasPp1s30_295V6
aliasPhpat.002G066900
aliasPhypa_178433
pacid32932734

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process AT2G46340
GO:0009581
IEA
PLAZA Integrative Orthologydetection of external stimulus AT2G46340
GO:0009585
IEA
PLAZA Integrative Orthologyred, far-red light phototransduction AT2G46340
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction AT2G46340
GO:0009583
IEA
PLAZA Integrative Orthologydetection of light stimulus AT2G46340
GO:0030163
IEA
PLAZA Integrative Orthologyprotein catabolic process ENSG00000143207
GO:0009582
IEA
PLAZA Integrative Orthologydetection of abiotic stimulus AT2G46340
GO:0030162
IEA
PLAZA Integrative Orthologyregulation of proteolysis ENSG00000143207
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process AT2G46340
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process ENSG00000143207
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT2G46340
GO:0007602
IEA
PLAZA Integrative Orthologyphototransduction AT2G46340
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction AT2G46340
GO:0006511
IEA
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process ENSG00000143207
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process ENSG00000143207
GO:0006508
IEA
PLAZA Integrative Orthologyproteolysis ENSG00000143207
GO:0051239
IEA
PLAZA Integrative Orthologyregulation of multicellular organismal process AT2G46340
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT2G46340
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process ENSG00000143207
GO:0044257
IEA
PLAZA Integrative Orthologycellular protein catabolic process ENSG00000143207
GO:0045862
IEA
PLAZA Integrative Orthologypositive regulation of proteolysis ENSG00000143207
GO:0043687
IEA
PLAZA Integrative Orthologypost-translational protein modification ENSG00000143207
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus AT2G46340
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus AT2G46340
GO:0048581
IEA
PLAZA Integrative Orthologynegative regulation of post-embryonic development AT2G46340
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process ENSG00000143207
GO:0048585
IEA
PLAZA Integrative Orthologynegative regulation of response to stimulus AT2G46340
GO:2000058
IEA
PLAZA Integrative Orthologyregulation of ubiquitin-dependent protein catabolic process ENSG00000143207
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation AT2G46340
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process AT2G46340
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT2G46340
GO:0019941
IEA
PLAZA Integrative Orthologymodification-dependent protein catabolic process ENSG00000143207
GO:0048580
IEA
PLAZA Integrative Orthologyregulation of post-embryonic development AT2G46340
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development AT2G46340
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process ENSG00000143207
GO:0007154
IEA
PLAZA Integrative Orthologycell communication AT2G46340
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development AT2G46340
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process ENSG00000143207
GO:2000060
IEA
PLAZA Integrative Orthologypositive regulation of ubiquitin-dependent protein catabolic process ENSG00000143207
GO:0010100
IEA
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT2G46340
GO:1903050
IEA
PLAZA Integrative Orthologyregulation of proteolysis involved in cellular protein catabolic process ENSG00000143207
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus AT2G46340
GO:0010228
IEA
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT2G46340
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT2G46340
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT2G46340
GO:0048575
IEA
PLAZA Integrative Orthologyshort-day photoperiodism, flowering AT2G46340
GO:0043161
IEA
PLAZA Integrative Orthologyproteasome-mediated ubiquitin-dependent protein catabolic process ENSG00000143207
GO:0048731
IEA
PLAZA Integrative Orthologysystem development AT2G46340
GO:0009639
IEA
PLAZA Integrative Orthologyresponse to red or far red light AT2G46340
GO:0048573
IEA
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G46340
GO:0048572
IEA
PLAZA Integrative Orthologyshort-day photoperiodism AT2G46340
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000143207
GO:0009637
IEA
PLAZA Integrative Orthologyresponse to blue light AT2G46340
GO:0003006
IEA
PLAZA Integrative Orthologydevelopmental process involved in reproduction AT2G46340
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT2G46340
GO:0010218
IEA
PLAZA Integrative Orthologyresponse to far red light AT2G46340
GO:0051606
IEA
PLAZA Integrative Orthologydetection of stimulus AT2G46340
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus AT2G46340
GO:0051603
IEA
PLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic process ENSG00000143207
GO:0010212
IEA
PLAZA Integrative Orthologyresponse to ionizing radiation ENSG00000143207
GO:1903052
IEA
PLAZA Integrative Orthologypositive regulation of proteolysis involved in cellular protein catabolic process ENSG00000143207
GO:0048608
IEA
PLAZA Integrative Orthologyreproductive structure development AT2G46340
GO:0009640
IEA
PLAZA Integrative Orthologyphotomorphogenesis AT2G46340
GO:0045732
IEA
PLAZA Integrative Orthologypositive regulation of protein catabolic process ENSG00000143207
GO:0009648
IEA
PLAZA Integrative Orthologyphotoperiodism AT2G46340
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process ENSG00000143207
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process ENSG00000143207
GO:0042176
IEA
PLAZA Integrative Orthologyregulation of protein catabolic process ENSG00000143207
GO:0061136
IEA
PLAZA Integrative Orthologyregulation of proteasomal protein catabolic process ENSG00000143207
GO:2000026
IEA
PLAZA Integrative Orthologyregulation of multicellular organismal development AT2G46340
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000143207
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000143207
GO:2000028
IEA
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT2G46340
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process ENSG00000143207
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus AT2G46340
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000143207
GO:2000030
IEA
PLAZA Integrative Orthologyregulation of response to red or far red light AT2G46340
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process ENSG00000143207
GO:0010114
IEA
PLAZA Integrative Orthologyresponse to red light AT2G46340
GO:0010099
IEA
PLAZA Integrative Orthologyregulation of photomorphogenesis AT2G46340
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process ENSG00000143207
GO:0032268
IEA
PLAZA Integrative Orthologyregulation of cellular protein metabolic process ENSG00000143207
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process ENSG00000143207
GO:0009657
IEA
PLAZA Integrative Orthologyplastid organization AT2G46340
GO:0009658
IEA
PLAZA Integrative Orthologychloroplast organization AT2G46340
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus AT2G46340
GO:1901800
IEA
PLAZA Integrative Orthologypositive regulation of proteasomal protein catabolic process ENSG00000143207
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process ENSG00000143207
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process ENSG00000143207
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process ENSG00000143207
GO:0032270
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein metabolic process ENSG00000143207
GO:0032436
IEA
PLAZA Integrative Orthologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process ENSG00000143207
GO:0032434
IEA
PLAZA Integrative Orthologyregulation of proteasomal ubiquitin-dependent protein catabolic process ENSG00000143207
GO:0071489
IEA
PLAZA Integrative Orthologycellular response to red or far red light AT2G46340
GO:0023052
IEA
PLAZA Integrative Orthologysignaling AT2G46340
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus AT2G46340
GO:0043632
IEA
PLAZA Integrative Orthologymodification-dependent macromolecule catabolic process ENSG00000143207
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT2G46340
GO:0010498
IEA
PLAZA Integrative Orthologyproteasomal protein catabolic process ENSG00000143207
GO:0010017
IEA
PLAZA Integrative Orthologyred or far-red light signaling pathway AT2G46340
GO:0051241
IEA
PLAZA Integrative Orthologynegative regulation of multicellular organismal process AT2G46340
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000143207
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process AT2G46340
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process AT2G46340
GO:0051247
IEA
PLAZA Integrative Orthologypositive regulation of protein metabolic process ENSG00000143207
GO:0051246
IEA
PLAZA Integrative Orthologyregulation of protein metabolic process ENSG00000143207
GO:0061458
IEA
PLAZA Integrative Orthologyreproductive system development AT2G46340
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000143207
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process AT2G46340
GO:0051093
IEA
PLAZA Integrative Orthologynegative regulation of developmental process AT2G46340
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation AT2G46340
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development AT2G46340
GO:1903364
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein catabolic process ENSG00000143207
GO:2000241
IEA
PLAZA Integrative Orthologyregulation of reproductive process AT2G46340
GO:1903362
IEA
PLAZA Integrative Orthologyregulation of cellular protein catabolic process ENSG00000143207

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
InterProprotein binding
GO:0042802
IEA
PLAZA Integrative Orthologyidentical protein binding AT2G46340
GO:0004842
IEA
PLAZA Integrative Orthologyubiquitin-protein transferase activity ENSG00000143207
GO:0019787
IEA
PLAZA Integrative Orthologyubiquitin-like protein transferase activity ENSG00000143207
GO:0061659
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase activity ENSG00000143207
GO:0061630
IEA
PLAZA Integrative Orthologyubiquitin protein ligase activity ENSG00000143207

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part AT2G46340
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part AT2G46340
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part AT2G46340
GO:1990234
IEA
PLAZA Integrative Orthologytransferase complex ENSG00000143207
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen AT2G46340
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm AT2G46340
GO:1902494
IEA
PLAZA Integrative Orthologycatalytic complex ENSG00000143207
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex ENSG00000143207
GO:0000151
IEA
PLAZA Integrative Orthologyubiquitin ligase complex ENSG00000143207
GO:0005829
IEA
PLAZA Integrative Orthologycytosol ENSG00000143207
GO:0016604
IEA
PLAZA Integrative Orthologynuclear body AT2G46340
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm ENSG00000143207
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular AT2G46340
GO:0080008
IEA
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex ENSG00000143207
GO:0044464
IEA
PLAZA Integrative Orthologycell part AT2G46340
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen AT2G46340
GO:0031461
IEA
PLAZA Integrative Orthologycullin-RING ubiquitin ligase complex ENSG00000143207
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen AT2G46340
GO:0031464
IEA
PLAZA Integrative OrthologyCul4A-RING E3 ubiquitin ligase complex ENSG00000143207
GO:0044451
IEA
PLAZA Integrative Orthologynucleoplasm part AT2G46340
GO:0005634
IEA
PLAZA Integrative Orthologynucleus AT2G46340
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part AT2G46340
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part ENSG00000143207
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen AT2G46340
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT2G46340
GO:0005623
IEA
PLAZA Integrative Orthologycell AT2G46340
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle AT2G46340
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle AT2G46340
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle AT2G46340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR001680WD40 repeat
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR000719Protein kinase domain
IPR017986WD40-repeat-containing domain
IPR011009Protein kinase-like domain superfamily

No MapMan annotations defined for this gene.
KeggID Description
K10143RFWD2, COP1; E3 ubiquitin-protein ligase RFWD2
No chloroplast target sequence found.