Gene: Ec-04_000720 (Ectocarpus siliculosus)

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Gene Identifier
Ec-04_000720
Transcript Identifier
Ec-04_000720.2
Gene Type
Coding gene
Location
chr_04 : 787838-804219 : positive

Family Information

Homologous gene family
HOM02SEM002047
(32 genes in 25 species)
specific family

Descriptions

Identifiers

Type Value
GeneNameEc-04_000720

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process FBgn0035150
GO:0010569
IEA
PLAZA Integrative Orthologyregulation of double-strand break repair via homologous recombination FBgn0035150
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process SPBC1347.01c
GO:0000002
IEA
PLAZA Integrative Orthologymitochondrial genome maintenance SPBC1347.01c
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization SPBC1347.01c
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process SPBC1347.01c
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process SPBC1347.01c
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus FBgn0035150
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process SPBC1347.01c
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process SPBC1347.01c
GO:0010224
IEA
PLAZA Integrative Orthologyresponse to UV-B AT5G44750
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process SPBC1347.01c
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis SPBC1347.01c
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process SPBC1347.01c
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization SPBC1347.01c
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process SPBC1347.01c
GO:2001020
IEA
PLAZA Integrative Orthologyregulation of response to DNA damage stimulus FBgn0035150
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT5G44750
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process FBgn0035150
GO:0000018
IEA
PLAZA Integrative Orthologyregulation of DNA recombination FBgn0035150
GO:0051052
IEA
PLAZA Integrative Orthologyregulation of DNA metabolic process FBgn0035150
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process FBgn0035150
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process FBgn0035150
GO:0007005
IEA
PLAZA Integrative Orthologymitochondrion organization SPBC1347.01c
GO:0006310
IEA
PLAZA Integrative OrthologyDNA recombination FBgn0035150
GO:0000724
IEA
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination FBgn0035150
GO:0000725
IEA
PLAZA Integrative Orthologyrecombinational repair FBgn0035150
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process FBgn0035150
GO:0070987
IEA
PLAZA Integrative Orthologyerror-free translesion synthesis SPBC1347.01c
GO:0019985
IEA
PLAZA Integrative Orthologytranslesion synthesis SPBC1347.01c
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process FBgn0035150
GO:2000779
IEA
PLAZA Integrative Orthologyregulation of double-strand break repair FBgn0035150
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process SPBC1347.01c
GO:0006302
IEA
PLAZA Integrative Orthologydouble-strand break repair FBgn0035150
GO:0006301
IEA
PLAZA Integrative Orthologypostreplication repair SPBC1347.01c
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus AT5G44750
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV AT5G44750
GO:0042276
IEA
PLAZA Integrative Orthologyerror-prone translesion synthesis SPBC1347.01c
GO:0006260
IEA
PLAZA Integrative OrthologyDNA replication ENSG00000135945
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process SPBC1347.01c
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process FBgn0035150
GO:0032042
IEA
PLAZA Integrative Orthologymitochondrial DNA metabolic process SPBC1347.01c
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation FBgn0035150
GO:0071897
IEA
PLAZA Integrative OrthologyDNA biosynthetic process SPBC1347.01c
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process FBgn0035150
GO:0000731
IEA
PLAZA Integrative OrthologyDNA synthesis involved in DNA repair SPBC1347.01c
GO:0080135
IEA
PLAZA Integrative Orthologyregulation of cellular response to stress FBgn0035150
GO:0080134
IEA
PLAZA Integrative Orthologyregulation of response to stress FBgn0035150
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation AT5G44750
GO:0006282
IEA
PLAZA Integrative Orthologyregulation of DNA repair FBgn0035150
GO:0043504
IEA
PLAZA Integrative Orthologymitochondrial DNA repair SPBC1347.01c

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0016779
IEA
PLAZA Integrative Orthologynucleotidyltransferase activity AT5G44750
GO:0017125
IEA
PLAZA Integrative Orthologydeoxycytidyl transferase activity YOR346W
GO:0003887
IEA
PLAZA Integrative OrthologyDNA-directed DNA polymerase activity AT5G44750
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity AT5G44750
GO:0140097
IEA
PLAZA Integrative Orthologycatalytic activity, acting on DNA AT5G44750
GO:0003824
IEA
PLAZA Integrative Orthologycatalytic activity AT5G44750
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000135945
GO:0034061
IEA
PLAZA Integrative OrthologyDNA polymerase activity AT5G44750
GO:0016772
IEA
PLAZA Integrative Orthologytransferase activity, transferring phosphorus-containing groups AT5G44750

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005819
IEA
PLAZA Integrative Orthologyspindle SPBC1347.01c
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part SPBC1347.01c
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPBC1347.01c
GO:0005657
IEA
PLAZA Integrative Orthologyreplication fork YOR346W
GO:0044427
IEA
PLAZA Integrative Orthologychromosomal part SPBC1347.01c
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPBC1347.01c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPBC1347.01c
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPBC1347.01c
GO:0072686
IEA
PLAZA Integrative Orthologymitotic spindle SPBC1347.01c
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000135945
GO:0035861
IEA
PLAZA Integrative Orthologysite of double-strand break SPBC1347.01c
GO:0000790
IEA
PLAZA Integrative Orthologynuclear chromatin YOR346W
GO:0000785
IEA
PLAZA Integrative Orthologychromatin YOR346W
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton SPBC1347.01c
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion YOR346W
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm YOR346W
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton SPBC1347.01c
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPBC1347.01c
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPBC1347.01c
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPBC1347.01c
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus SPBC1347.01c
GO:0005694
IEA
PLAZA Integrative Orthologychromosome SPBC1347.01c
GO:0044454
IEA
PLAZA Integrative Orthologynuclear chromosome part YOR346W
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPBC1347.01c
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPBC1347.01c
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPBC1347.01c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part YOR346W
GO:0000228
IEA
PLAZA Integrative Orthologynuclear chromosome YOR346W
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPBC1347.01c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPBC1347.01c
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPBC1347.01c
GO:0005623
IEA
PLAZA Integrative Orthologycell SPBC1347.01c
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPBC1347.01c
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPBC1347.01c
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPBC1347.01c
GO:0090734
IEA
PLAZA Integrative Orthologysite of DNA damage SPBC1347.01c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPBC1347.01c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001357BRCT domain
IPR017961DNA polymerase, Y-family, little finger domain
IPR001126UmuC domain

No MapMan annotations defined for this gene.
KeggID Description
K03515REV1; DNA repair protein REV1 [EC:2.7.7.-]
No chloroplast target sequence found.