Gene: ENSG00000172819 (Homo sapiens)

Overview top

Gene Identifier
ENSG00000172819
Transcript Identifier
ENST00000425354
Gene Type
Coding gene
Location
12 : 53211676-53227545 : negative

Family Information

Homologous gene family
HOM02SEM000137
(184 genes in 3 species)
specific family
Orthologous gene family
ORTHO02SEM009303
(8 genes in 3 species)
specific family

Descriptions

gene_descr
retinoic acid receptor, gamma

Identifiers

Type Value
pidENSP00000388510
HGNC9866
UniprotP13631
UniprotA8K3H3
RefSeq_mRNANM_000966.5
EMBLCHEMBL2363071
EMBLAB307689
EMBLAC021072
EMBLAC073573
EMBLAJ250835
EMBLAK290588
EMBLAK297023
EMBLAK297277
EMBLAK316259
EMBLAY013703
EMBLAY013704
EMBLBC093727
EMBLBC093729
EMBLCH471054
EMBLHQ692828
EMBLM24857
EMBLM32074
EMBLM38258
EMBLM57707
EMBLX57280

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071300
IEA
Genome Projectcellular response to retinoic acid
GO:0070384
IEA
Genome ProjectHarderian gland development
GO:0060740
IEA
Genome Projectprostate gland epithelium morphogenesis
GO:0060534
IEA
Genome Projecttrachea cartilage development
GO:0060324
IEA
Genome Projectface development
GO:0060070
TAS
Genome Projectcanonical Wnt signaling pathway
GO:0060070
TAS
Gene Ontologycanonical Wnt signaling pathway1
GO:0048384
IDA
Genome Projectretinoic acid receptor signaling pathway
GO:0048384
IDA
Gene Ontologyretinoic acid receptor signaling pathway2
GO:0048048
ISS
Genome Projectembryonic eye morphogenesis
GO:0048048
ISS
Gene Ontologyembryonic eye morphogenesis
GO:0045944
ISS
Genome Projectpositive regulation of transcription by RNA polymerase II
GO:0045944
ISS
Gene Ontologypositive regulation of transcription by RNA polymerase II
GO:0045637
IEA
Genome Projectregulation of myeloid cell differentiation
GO:0043401
IEA
Genome Projectsteroid hormone mediated signaling pathway
GO:0043068
ISS
Genome Projectpositive regulation of programmed cell death
GO:0043068
ISS
Gene Ontologypositive regulation of programmed cell death
GO:0043066
IEA
Genome Projectnegative regulation of apoptotic process
GO:0043065
ISS
Genome Projectpositive regulation of apoptotic process
GO:0043065
ISS
Gene Ontologypositive regulation of apoptotic process
GO:0035264
IEA
Genome Projectmulticellular organism growth
GO:0035116
ISS
Genome Projectembryonic hindlimb morphogenesis
GO:0035116
ISS
Gene Ontologyembryonic hindlimb morphogenesis
GO:0032526
IDA
Genome Projectresponse to retinoic acid
GO:0032526
IDA
Gene Ontologyresponse to retinoic acid2
GO:0032331
IEA
Genome Projectnegative regulation of chondrocyte differentiation
GO:0031641
IEA
Genome Projectregulation of myelination
GO:0031076
IEA
Genome Projectembryonic camera-type eye development
GO:0009952
IEA
Genome Projectanterior/posterior pattern specification
GO:0008361
TAS
Genome Projectregulation of cell size
GO:0008361
TAS
Gene Ontologyregulation of cell size3
GO:0008285
ISS
Genome Projectnegative regulation of cell proliferation
GO:0008285
ISS
Gene Ontologynegative regulation of cell proliferation
GO:0008284
IEA
Genome Projectpositive regulation of cell proliferation
GO:0006367
TAS
Genome Projecttranscription initiation from RNA polymerase II promoter
GO:0006367
TAS
Gene Ontologytranscription initiation from RNA polymerase II promoter
GO:0003430
IEA
Genome Projectgrowth plate cartilage chondrocyte growth
GO:0003406
IEA
Genome Projectretinal pigment epithelium development
GO:0002068
IEA
Genome Projectglandular epithelial cell development
GO:0001843
IEA
Genome Projectneural tube closure
GO:0000122
ISS
Genome Projectnegative regulation of transcription by RNA polymerase II
GO:0000122
ISS
Gene Ontologynegative regulation of transcription by RNA polymerase II
GO:0048565
IEA
PLAZA Integrative Orthologydigestive tract development ENSG00000077092
GO:0055123
IEA
PLAZA Integrative Orthologydigestive system development ENSG00000077092
GO:0048566
IEA
PLAZA Integrative Orthologyembryonic digestive tract development ENSG00000077092

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046965
ISS
Genome Projectretinoid X receptor binding
GO:0046965
ISS
Gene Ontologyretinoid X receptor binding
GO:0008270
IEA
Genome Projectzinc ion binding
GO:0005515
IPI
Genome Projectprotein binding
GO:0005515
IPI
Gene Ontologyprotein binding4 5 6 7
GO:0003708
IEA
Genome Projectretinoic acid receptor activity
GO:0003707
IEA
Genome Projectsteroid hormone receptor activity
GO:0003700
ISS
Genome ProjectDNA-binding transcription factor activity
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity
GO:0003677
ISS
Genome ProjectDNA binding
GO:0003677
ISS
Gene OntologyDNA binding
GO:0000977
IEA
Genome ProjectRNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981
ISA, ISM
NAS
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
NAS
Genome Projectintegral component of membrane
GO:0016021
NAS
Gene Ontologyintegral component of membrane2
GO:0005667
ISS
Genome Projecttranscription factor complex
GO:0005667
ISS
Gene Ontologytranscription factor complex
GO:0005654
IDA
TAS
Genome Projectnucleoplasm
GO:0005654
IDA
TAS
Gene Ontologynucleoplasm
GO:0005634
IDA
ISS
Genome Projectnucleus
GO:0005634
IDA
ISS
Gene Ontologynucleus9
GO:0000790
IEA
Genome Projectnuclear chromatin

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000536Nuclear hormone receptor, ligand-binding domain
IPR001628Zinc finger, nuclear hormone receptor-type
IPR001723Nuclear hormone receptor
IPR003078Retinoic acid receptor
IPR013088Zinc finger, NHR/GATA-type

No MapMan annotations defined for this gene.
KeggID Description
K08529RARG, NR1B3; retinoic acid receptor gamma
No chloroplast target sequence found.