Gene: ENSG00000162971 (Homo sapiens)

Overview top

Gene Identifier
ENSG00000162971
Transcript Identifier
ENST00000354611
Gene Type
Coding gene
Location
2 : 199933067-199955470 : negative

Family Information

Homologous gene family
HOM02SEM000723
(60 genes in 21 species)
specific family

Descriptions

gene_descr
tRNA-yW synthesizing protein 5

Identifiers

Type Value
pidENSP00000346627
HGNC26754
UniprotA2RUC4
RefSeq_mRNANM_001039693.2
EMBLAC097717
EMBLAK095272
EMBLAK298977
EMBLBC063502
EMBLBC132835
EMBLBC136837
EMBLCH471063

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055114
IEA
Genome Projectoxidation-reduction process
GO:0031591
IDA
Genome Projectwybutosine biosynthetic process
GO:0031591
IDA
Gene Ontologywybutosine biosynthetic process1 2
GO:0006400
TAS
Genome ProjecttRNA modification
GO:0006400
TAS
Gene OntologytRNA modification
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT3G20810
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT3G20810
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT3G20810
GO:0070076
IEA
PLAZA Integrative Orthologyhistone lysine demethylation AT3G20810
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization AT3G20810
GO:0048511
IEA
PLAZA Integrative Orthologyrhythmic process AT3G20810
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization AT3G20810
GO:0007623
IEA
PLAZA Integrative Orthologycircadian rhythm AT3G20810
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process AT3G20810
GO:0008214
IEA
PLAZA Integrative Orthologyprotein dealkylation AT3G20810
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT3G20810
GO:0016577
IEA
PLAZA Integrative Orthologyhistone demethylation AT3G20810
GO:0070988
IEA
PLAZA Integrative Orthologydemethylation AT3G20810
GO:0070544
IEA
PLAZA Integrative Orthologyhistone H3-K36 demethylation AT3G20810
GO:0016570
IEA
PLAZA Integrative Orthologyhistone modification AT3G20810
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process AT3G20810
GO:0042752
IEA
PLAZA Integrative Orthologyregulation of circadian rhythm AT3G20810
GO:0006325
IEA
PLAZA Integrative Orthologychromatin organization AT3G20810
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process AT3G20810
GO:0006482
IEA
PLAZA Integrative Orthologyprotein demethylation AT3G20810
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process AT3G20810
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process AT3G20810
GO:0016569
IEA
PLAZA Integrative Orthologycovalent chromatin modification AT3G20810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042803
IDA
Genome Projectprotein homodimerization activity
GO:0042803
IDA
Gene Ontologyprotein homodimerization activity2
GO:0016706
EXP, IDA
Genome Projectoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016706
EXP, IDA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1 2
GO:0005506
IDA
Genome Projectiron ion binding
GO:0005506
IDA
Gene Ontologyiron ion binding2
GO:0000049
IDA
Genome ProjecttRNA binding
GO:0000049
IDA
Gene OntologytRNA binding2
GO:0016741
IEA
PLAZA Integrative Orthologytransferase activity, transferring one-carbon groups AT3G20810
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity AT3G20810
GO:0018024
IEA
PLAZA Integrative Orthologyhistone-lysine N-methyltransferase activity AT3G20810
GO:0042054
IEA
PLAZA Integrative Orthologyhistone methyltransferase activity AT3G20810
GO:0008757
IEA
PLAZA Integrative OrthologyS-adenosylmethionine-dependent methyltransferase activity AT3G20810
GO:0008276
IEA
PLAZA Integrative Orthologyprotein methyltransferase activity AT3G20810
GO:0008170
IEA
PLAZA Integrative OrthologyN-methyltransferase activity AT3G20810
GO:0140096
IEA
PLAZA Integrative Orthologycatalytic activity, acting on a protein AT3G20810
GO:0016279
IEA
PLAZA Integrative Orthologyprotein-lysine N-methyltransferase activity AT3G20810
GO:0140110
IEA
PLAZA Integrative Orthologytranscription regulator activity AT3G20810
GO:0016278
IEA
PLAZA Integrative Orthologylysine N-methyltransferase activity AT3G20810
GO:0003700
IEA
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G20810
GO:0008168
IEA
PLAZA Integrative Orthologymethyltransferase activity AT3G20810
GO:0046975
IEA
PLAZA Integrative Orthologyhistone methyltransferase activity (H3-K36 specific) AT3G20810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
TAS
Genome Projectcytoplasm
GO:0005737
TAS
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003347JmjC domain
IPR029612tRNA wybutosine-synthesizing protein 5

No MapMan annotations defined for this gene.
KeggID Description
K18066TYW5; tRNA wybutosine-synthesizing protein 5
No chloroplast target sequence found.