Gene: CC00G59600 (Cyclotella cryptica)

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Gene Identifier
CC00G59600
Transcript Identifier
CC00G59600.1
Gene Type
Coding gene
Location
g042146_00083 : 5387-10253 : positive

Family Information

Homologous gene family
HOM02SEM005916
(14 genes in 11 species)
specific family

Descriptions

eggnog_description
PHD-finger

Identifiers

Type Value
GeneNameg3740.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process AT4G29940
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process AT4G29940
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT4G29940
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process AT4G29940
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process AT4G29940
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process AT4G29940
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process AT4G29940
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process AT4G29940
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process AT4G29940
GO:0031328
IEA
PLAZA Integrative Orthologypositive regulation of cellular biosynthetic process AT4G29940
GO:1903508
IEA
PLAZA Integrative Orthologypositive regulation of nucleic acid-templated transcription AT4G29940
GO:0009987
IEA
PLAZA Integrative Orthologycellular process AT4G29940
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process AT4G29940
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated AT4G29940
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process AT4G29940
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process AT4G29940
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT4G29940
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process AT4G29940
GO:0010557
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule biosynthetic process AT4G29940
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process AT4G29940
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process AT4G29940
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process AT4G29940
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process AT4G29940
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process AT4G29940
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process AT4G29940
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT4G29940
GO:0009733
IEA
PLAZA Integrative Orthologyresponse to auxin AT4G29940
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription AT4G29940
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process AT4G29940
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process AT4G29940
GO:0009891
IEA
PLAZA Integrative Orthologypositive regulation of biosynthetic process AT4G29940
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process AT4G29940
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process AT4G29940
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process AT4G29940
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process AT4G29940
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process AT4G29940
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription AT4G29940
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process AT4G29940
GO:0010467
IEA
PLAZA Integrative Orthologygene expression AT4G29940
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression AT4G29940
GO:0009719
IEA
PLAZA Integrative Orthologyresponse to endogenous stimulus AT4G29940
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process AT4G29940
GO:0010628
IEA
PLAZA Integrative Orthologypositive regulation of gene expression AT4G29940
GO:0051254
IEA
PLAZA Integrative Orthologypositive regulation of RNA metabolic process AT4G29940
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT4G29940
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process AT4G29940
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process AT4G29940
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process AT4G29940
GO:0009725
IEA
PLAZA Integrative Orthologyresponse to hormone AT4G29940
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process AT4G29940
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT4G29940
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process AT4G29940
GO:0010033
IEA
PLAZA Integrative Orthologyresponse to organic substance AT4G29940
GO:0045935
IEA
PLAZA Integrative Orthologypositive regulation of nucleobase-containing compound metabolic process AT4G29940
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT4G29940
GO:1902680
IEA
PLAZA Integrative Orthologypositive regulation of RNA biosynthetic process AT4G29940
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process AT4G29940
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation AT4G29940
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process AT4G29940
GO:0045893
IEA
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G29940
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process AT4G29940
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process AT4G29940
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process AT4G29940
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT4G29940
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT4G29940
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process AT4G29940
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process AT4G29940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding AT4G29940
GO:0003677
IEA
PLAZA Integrative OrthologyDNA binding AT4G29940
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding AT4G29940
GO:0043169
IEA
PLAZA Homology (enrichment)cation binding HOM02SEM005916
GO:0043565
IEA
PLAZA Integrative Orthologysequence-specific DNA binding AT4G29940
GO:0043167
IEA
PLAZA Homology (enrichment)ion binding HOM02SEM005916
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding AT4G29940
GO:0046914
IEA
PLAZA Homology (enrichment)transition metal ion binding HOM02SEM005916
GO:0046872
IEA
PLAZA Homology (enrichment)metal ion binding HOM02SEM005916
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT4G29940
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT4G29940
GO:0008270
IEA
PLAZA Homology (enrichment)zinc ion binding HOM02SEM005916

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
EggNOGmappernucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019787Zinc finger, PHD-finger
IPR001876Zinc finger, RanBP2-type
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.